RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 ACOT12Q8WYK0 555 aa1.66□□□□□ -2.14
SCFD1-210ENST00000553693 ANKRD7Q92527 254 aa1.66□□□□□ -2.14
SCFD1-210ENST00000553693 BTF3L4Q96K17 158 aa1.66□□□□□ -2.14
SCFD1-210ENST00000553693 IGF2BP2-AS1Q96M15 143 aa1.66□□□□□ -2.14
SCFD1-210ENST00000553693 PECRQ9BY49 303 aa1.66□□□□□ -2.14
SCFD1-210ENST00000553693 NKX6-2Q9C056 277 aaPredicted RBP1.66□□□□□ -2.14
SCFD1-210ENST00000553693 HHLA2Q9UM44 414 aa1.66□□□□□ -2.14
SCFD1-210ENST00000553693 SLC22A13Q9Y226 551 aa1.66□□□□□ -2.14
SCFD1-210ENST00000553693 SOX21Q9Y651 276 aaPredicted RBP1.66□□□□□ -2.14
SCFD1-210ENST00000553693 EXPH5Q8NEV8 1989 aa1.66□□□□□ -2.14
SCFD1-210ENST00000553693 RYR1P21817 5038 aa1.66□□□□□ -2.14
SCFD1-210ENST00000553693 DYNC2H1Q8NCM8 4307 aaKnown RBP1.65□□□□□ -2.14
SCFD1-210ENST00000553693 DNAH9Q9NYC9 4486 aa1.65□□□□□ -2.14
SCFD1-210ENST00000553693 IGLV3-32A0A0A0MS00 114 aa1.65□□□□□ -2.15
SCFD1-210ENST00000553693 ZNF189O75820 626 aaPredicted RBP1.65□□□□□ -2.15
SCFD1-210ENST00000553693 FSTL3O95633 263 aa1.65□□□□□ -2.15
SCFD1-210ENST00000553693 OPN1SWP03999 348 aa1.65□□□□□ -2.15
SCFD1-210ENST00000553693 CRYGDP07320 174 aa1.65□□□□□ -2.15
SCFD1-210ENST00000553693 CD200P41217 278 aa1.65□□□□□ -2.15
SCFD1-210ENST00000553693 FOXA1P55317 472 aa1.65□□□□□ -2.15
SCFD1-210ENST00000553693 PSME3P61289 254 aa1.65□□□□□ -2.15
SCFD1-210ENST00000553693 SARNPP82979 210 aaKnown RBP1.65□□□□□ -2.15
SCFD1-210ENST00000553693 PRDX4Q13162 271 aa1.65□□□□□ -2.15
SCFD1-210ENST00000553693 TSNQ15631 228 aaKnown RBP1.65□□□□□ -2.15
SCFD1-210ENST00000553693 PLPPR5Q32ZL2 321 aa1.65□□□□□ -2.15
SCFD1-210ENST00000553693 KRTAP6-3Q3LI67 103 aa1.65□□□□□ -2.15
SCFD1-210ENST00000553693 RASL11AQ6T310 242 aa1.65□□□□□ -2.15
SCFD1-210ENST00000553693 TMPPEQ6ZT21 453 aa1.65□□□□□ -2.15
SCFD1-210ENST00000553693 LRRC34Q8IZ02 419 aa1.65□□□□□ -2.15
SCFD1-210ENST00000553693 GPR32P1Q8NGA4 272 aa1.65□□□□□ -2.15
SCFD1-210ENST00000553693 OR2T27Q8NH04 317 aa1.65□□□□□ -2.15
SCFD1-210ENST00000553693 OR4K13Q8NH42 304 aa1.65□□□□□ -2.15
SCFD1-210ENST00000553693 OR5P3Q8WZ94 311 aa1.65□□□□□ -2.15
SCFD1-210ENST00000553693 CPNE2Q96FN4 548 aaPredicted RBP1.65□□□□□ -2.15
SCFD1-210ENST00000553693 OR8B2Q96RD0 313 aa1.65□□□□□ -2.15
SCFD1-210ENST00000553693 OR52E6Q96RD3 313 aa1.65□□□□□ -2.15
SCFD1-210ENST00000553693 B9D2Q9BPU9 175 aa1.65□□□□□ -2.15
SCFD1-210ENST00000553693 EFCAB11Q9BUY7 163 aa1.65□□□□□ -2.15
SCFD1-210ENST00000553693 GNB1LQ9BYB4 327 aa1.65□□□□□ -2.15
SCFD1-210ENST00000553693 OR51I1Q9H343 314 aa1.65□□□□□ -2.15
SCFD1-210ENST00000553693 TXNL4BQ9NX01 149 aaKnown RBP1.65□□□□□ -2.15
SCFD1-210ENST00000553693 MRPL16Q9NX20 251 aaKnown RBP1.65□□□□□ -2.15
SCFD1-210ENST00000553693 PAQR5Q9NXK6 330 aaPredicted RBP1.65□□□□□ -2.15
SCFD1-210ENST00000553693 ARL2BPQ9Y2Y0 163 aa1.65□□□□□ -2.15
SCFD1-210ENST00000553693 ARFGEF3Q5TH69 2177 aa1.64□□□□□ -2.15
SCFD1-210ENST00000553693 IGHV1-18A0A0C4DH31 117 aa1.64□□□□□ -2.15
SCFD1-210ENST00000553693 IGHV1-69-2A0A0G2JMI3 117 aa1.64□□□□□ -2.15
SCFD1-210ENST00000553693 MDFIC2A0A1B0GVS7 189 aa1.64□□□□□ -2.15
SCFD1-210ENST00000553693 IGSF23A1L1A6 192 aa1.64□□□□□ -2.15
SCFD1-210ENST00000553693 CLPSL1A2RUU4 121 aa1.64□□□□□ -2.15
SCFD1-210ENST00000553693 EVPLLA8MZ36 301 aa1.64□□□□□ -2.15
SCFD1-210ENST00000553693 M0R381 172 aa1.64□□□□□ -2.15
SCFD1-210ENST00000553693 BANF1O75531 89 aa1.64□□□□□ -2.15
SCFD1-210ENST00000553693 CDS2O95674 445 aa1.64□□□□□ -2.15
SCFD1-210ENST00000553693 REG1AP05451 166 aa1.64□□□□□ -2.15
SCFD1-210ENST00000553693 INAFM2P0DMQ5 153 aa1.64□□□□□ -2.15
SCFD1-210ENST00000553693 ESDP10768 282 aa1.64□□□□□ -2.15
SCFD1-210ENST00000553693 NPPCP23582 126 aa1.64□□□□□ -2.15
SCFD1-210ENST00000553693 ALDH3A1P30838 453 aa1.64□□□□□ -2.15
SCFD1-210ENST00000553693 HAAOP46952 286 aa1.64□□□□□ -2.15
SCFD1-210ENST00000553693 LRRC75BQ2VPJ9 315 aa1.64□□□□□ -2.15
SCFD1-210ENST00000553693 MRPL51Q4U2R6 128 aaKnown RBP1.64□□□□□ -2.15
SCFD1-210ENST00000553693 SLC48A1Q6P1K1 146 aa1.64□□□□□ -2.15
SCFD1-210ENST00000553693 SSX8Q7RTT4 187 aa1.64□□□□□ -2.15
SCFD1-210ENST00000553693 TEX29Q8N6K0 151 aa1.64□□□□□ -2.15
SCFD1-210ENST00000553693 OR11H1Q8NG94 326 aa1.64□□□□□ -2.15
SCFD1-210ENST00000553693 OR13C8Q8NGS7 320 aa1.64□□□□□ -2.15
SCFD1-210ENST00000553693 RAB2BQ8WUD1 216 aa1.64□□□□□ -2.15
SCFD1-210ENST00000553693 CEP19Q96LK0 163 aa1.64□□□□□ -2.15
SCFD1-210ENST00000553693 OR52B2Q96RD2 323 aa1.64□□□□□ -2.15
SCFD1-210ENST00000553693 CMSS1Q9BQ75 279 aaKnown RBP1.64□□□□□ -2.15
SCFD1-210ENST00000553693 MIEN1Q9BRT3 115 aa1.64□□□□□ -2.15
SCFD1-210ENST00000553693 PARD6GQ9BYG4 376 aaPredicted RBP1.64□□□□□ -2.15
SCFD1-210ENST00000553693 COMMD5Q9GZQ3 224 aa1.64□□□□□ -2.15
SCFD1-210ENST00000553693 GPR84Q9NQS5 396 aa1.64□□□□□ -2.15
SCFD1-210ENST00000553693 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.64□□□□□ -2.15
SCFD1-210ENST00000553693 AK3Q9UIJ7 227 aa1.64□□□□□ -2.15
SCFD1-210ENST00000553693 ANGPT4Q9Y264 503 aa1.64□□□□□ -2.15
SCFD1-210ENST00000553693 MRPS16Q9Y3D3 137 aaKnown RBP1.64□□□□□ -2.15
SCFD1-210ENST00000553693 LINC00588Q9Y4M8 146 aa1.64□□□□□ -2.15
SCFD1-210ENST00000553693 PXMP4Q9Y6I8 212 aa1.64□□□□□ -2.15
SCFD1-210ENST00000553693 PLCE1Q9P212 2302 aa1.63□□□□□ -2.15
SCFD1-210ENST00000553693 DNAH1Q9P2D7 4330 aa1.63□□□□□ -2.15
SCFD1-210ENST00000553693 IGHV3-73A0A0B4J1V6 119 aa1.63□□□□□ -2.15
SCFD1-210ENST00000553693 IGKV1-12A0A0C4DH73 117 aa1.63□□□□□ -2.15
SCFD1-210ENST00000553693 A0A1B0GW54 56 aa1.63□□□□□ -2.15
SCFD1-210ENST00000553693 A0A1W2PQL4 384 aaPredicted RBP1.63□□□□□ -2.15
SCFD1-210ENST00000553693 OR6C6A6NF89 314 aa1.63□□□□□ -2.15
SCFD1-210ENST00000553693 CLDN24A6NM45 220 aa1.63□□□□□ -2.15
SCFD1-210ENST00000553693 OR4C45A6NMZ5 311 aa1.63□□□□□ -2.15
SCFD1-210ENST00000553693 TRAPPC2LH3BP13 241 aa1.63□□□□□ -2.15
SCFD1-210ENST00000553693 K7EIL1 84 aa1.63□□□□□ -2.15
SCFD1-210ENST00000553693 SLC17A3O00476 420 aa1.63□□□□□ -2.15
SCFD1-210ENST00000553693 LECT2O14960 151 aa1.63□□□□□ -2.15
SCFD1-210ENST00000553693 IGKV1D-12P01611 117 aa1.63□□□□□ -2.15
SCFD1-210ENST00000553693 IFNA6P05013 189 aa1.63□□□□□ -2.15
SCFD1-210ENST00000553693 CGB3P0DN86 165 aa1.63□□□□□ -2.15
SCFD1-210ENST00000553693 CGB7P0DN87 165 aa1.63□□□□□ -2.15
SCFD1-210ENST00000553693 SERPINB1P30740 379 aa1.63□□□□□ -2.15
SCFD1-210ENST00000553693 MAP2K4P45985 399 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms