RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 A0A0J9YX75 114 aa13.09□□□□□ -0.31
SHMT2-206ENST00000553529 FAM24AA6NFZ4 105 aa13.09□□□□□ -0.31
SHMT2-206ENST00000553529 H3BTX0 84 aa13.09□□□□□ -0.31
SHMT2-206ENST00000553529 K7EPK0 472 aa13.09□□□□□ -0.31
SHMT2-206ENST00000553529 OR5G3P0C626 314 aa13.09□□□□□ -0.31
SHMT2-206ENST00000553529 EMP1P54849 157 aa13.09□□□□□ -0.31
SHMT2-206ENST00000553529 DLK1P80370 383 aa13.09□□□□□ -0.31
SHMT2-206ENST00000553529 C12orf74Q32Q52 190 aa13.09□□□□□ -0.31
SHMT2-206ENST00000553529 FOXI2Q6ZQN5 318 aa13.09□□□□□ -0.31
SHMT2-206ENST00000553529 ZNF431Q8TF32 576 aaPredicted RBP13.09□□□□□ -0.31
SHMT2-206ENST00000553529 SHANK2-AS3Q9BTD1 123 aa13.09□□□□□ -0.31
SHMT2-206ENST00000553529 SEPSECSQ9HD40 501 aaKnown RBP13.09□□□□□ -0.31
SHMT2-206ENST00000553529 IGLL5B9A064 214 aa13.08□□□□□ -0.32
SHMT2-206ENST00000553529 NUP62P37198 522 aaPredicted RBP13.08□□□□□ -0.32
SHMT2-206ENST00000553529 ZNF705AQ6ZN79 300 aaPredicted RBP13.08□□□□□ -0.32
SHMT2-206ENST00000553529 C1orf158Q8N1D5 194 aa13.08□□□□□ -0.32
SHMT2-206ENST00000553529 MGST2Q99735 147 aa13.08□□□□□ -0.32
SHMT2-206ENST00000553529 ARL6Q9H0F7 186 aa13.08□□□□□ -0.32
SHMT2-206ENST00000553529 APLNQ9ULZ1 77 aa13.08□□□□□ -0.32
SHMT2-206ENST00000553529 C5orf51A6NDU8 294 aa13.07□□□□□ -0.32
SHMT2-206ENST00000553529 ISLRO14498 428 aa13.07□□□□□ -0.32
SHMT2-206ENST00000553529 CST7O76096 145 aa13.07□□□□□ -0.32
SHMT2-206ENST00000553529 H2AFB2P0C5Z0 115 aa13.07□□□□□ -0.32
SHMT2-206ENST00000553529 ID1P41134 155 aa13.07□□□□□ -0.32
SHMT2-206ENST00000553529 GALR1P47211 349 aa13.07□□□□□ -0.32
SHMT2-206ENST00000553529 AMTNQ6UX39 209 aa13.07□□□□□ -0.32
SHMT2-206ENST00000553529 MFFQ9GZY8 342 aa13.07□□□□□ -0.32
SHMT2-206ENST00000553529 PTTG2Q9NZH5 202 aa13.07□□□□□ -0.32
SHMT2-206ENST00000553529 HIGD1AQ9Y241 93 aa13.07□□□□□ -0.32
SHMT2-206ENST00000553529 FRAS1Q86XX4 4008 aa13.07□□□□□ -0.32
SHMT2-206ENST00000553529 ZNF705FA8MVS1 300 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-206ENST00000553529 MRPS12O15235 138 aaKnown RBP13.06□□□□□ -0.32
SHMT2-206ENST00000553529 TSC22D2O75157 780 aa13.06□□□□□ -0.32
SHMT2-206ENST00000553529 SIX6O95475 246 aa13.06□□□□□ -0.32
SHMT2-206ENST00000553529 TMEM41BQ5BJD5 291 aa13.06□□□□□ -0.32
SHMT2-206ENST00000553529 C12orf45Q8N5I9 185 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-206ENST00000553529 OR10P1Q8NGE3 313 aa13.06□□□□□ -0.32
SHMT2-206ENST00000553529 C2CD4CQ8TF44 421 aa13.06□□□□□ -0.32
SHMT2-206ENST00000553529 CCDC32Q9BV29 185 aa13.06□□□□□ -0.32
SHMT2-206ENST00000553529 IGSF23A1L1A6 192 aa13.05□□□□□ -0.32
SHMT2-206ENST00000553529 M0R2Z0 102 aa13.05□□□□□ -0.32
SHMT2-206ENST00000553529 AGPAT2O15120 278 aa13.05□□□□□ -0.32
SHMT2-206ENST00000553529 HYPMO75409 117 aa13.05□□□□□ -0.32
SHMT2-206ENST00000553529 S100A10P60903 97 aa13.05□□□□□ -0.32
SHMT2-206ENST00000553529 PFDN2Q9UHV9 154 aa13.05□□□□□ -0.32
SHMT2-206ENST00000553529 SLC45A2Q9UMX9 530 aa13.05□□□□□ -0.32
SHMT2-206ENST00000553529 DNAH10Q8IVF4 4471 aa13.05□□□□□ -0.32
SHMT2-206ENST00000553529 FAM240BA0A1B0GVZ2 78 aa13.04□□□□□ -0.32
SHMT2-206ENST00000553529 BCAP31P51572 246 aa13.04□□□□□ -0.32
SHMT2-206ENST00000553529 CAV2P51636 162 aa13.04□□□□□ -0.32
SHMT2-206ENST00000553529 CNN1P51911 297 aaKnown RBP13.04□□□□□ -0.32
SHMT2-206ENST00000553529 PLP1P60201 277 aa13.04□□□□□ -0.32
SHMT2-206ENST00000553529 PSG9Q00887 426 aa13.04□□□□□ -0.32
SHMT2-206ENST00000553529 IL15RAQ13261 267 aa13.04□□□□□ -0.32
SHMT2-206ENST00000553529 RAB32Q13637 225 aa13.04□□□□□ -0.32
SHMT2-206ENST00000553529 SPINK13Q1W4C9 94 aa13.04□□□□□ -0.32
SHMT2-206ENST00000553529 TMEM37Q8WXS4 190 aa13.04□□□□□ -0.32
SHMT2-206ENST00000553529 ARV1Q9H2C2 271 aa13.04□□□□□ -0.32
SHMT2-206ENST00000553529 HRH4Q9H3N8 390 aa13.04□□□□□ -0.32
SHMT2-206ENST00000553529 NPVFQ9HCQ7 196 aa13.04□□□□□ -0.32
SHMT2-206ENST00000553529 MGAT4CQ9UBM8 478 aa13.04□□□□□ -0.32
SHMT2-206ENST00000553529 TRAV12-2A0A075B6T6 113 aa13.03□□□□□ -0.32
SHMT2-206ENST00000553529 TRAV5A0A0B4J249 113 aa13.03□□□□□ -0.32
SHMT2-206ENST00000553529 L7N2F9 121 aa13.03□□□□□ -0.32
SHMT2-206ENST00000553529 CRXO43186 299 aaPredicted RBP13.03□□□□□ -0.32
SHMT2-206ENST00000553529 CFDP00746 253 aaPredicted RBP13.03□□□□□ -0.32
SHMT2-206ENST00000553529 TAS2R30P59541 319 aa13.03□□□□□ -0.32
SHMT2-206ENST00000553529 RAP2BP61225 183 aa13.03□□□□□ -0.32
SHMT2-206ENST00000553529 NUTF2P61970 127 aaKnown RBP13.03□□□□□ -0.32
SHMT2-206ENST00000553529 VAMP2P63027 116 aa13.03□□□□□ -0.32
SHMT2-206ENST00000553529 MIC13Q5XKP0 118 aa13.03□□□□□ -0.32
SHMT2-206ENST00000553529 EBLN2Q6P2I7 272 aa13.03□□□□□ -0.32
SHMT2-206ENST00000553529 TEPPQ6URK8 271 aa13.03□□□□□ -0.32
SHMT2-206ENST00000553529 BAP18Q8IXM2 172 aa13.03□□□□□ -0.32
SHMT2-206ENST00000553529 OR11H7Q8NGC8 314 aa13.03□□□□□ -0.32
SHMT2-206ENST00000553529 C2orf50Q96LR7 162 aa13.03□□□□□ -0.32
SHMT2-206ENST00000553529 C1QTNF4Q9BXJ3 329 aa13.03□□□□□ -0.32
SHMT2-206ENST00000553529 PARD6GQ9BYG4 376 aaPredicted RBP13.03□□□□□ -0.32
SHMT2-206ENST00000553529 RPRMQ9NS64 109 aa13.03□□□□□ -0.32
SHMT2-206ENST00000553529 IGHV4-4A0A075B6R2 117 aa13.02□□□□□ -0.33
SHMT2-206ENST00000553529 SLC17A3O00476 420 aa13.02□□□□□ -0.33
SHMT2-206ENST00000553529 ASAH1Q13510 395 aa13.02□□□□□ -0.33
SHMT2-206ENST00000553529 ZNF846Q147U1 533 aa13.02□□□□□ -0.33
SHMT2-206ENST00000553529 LGALS9CQ6DKI2 356 aa13.02□□□□□ -0.33
SHMT2-206ENST00000553529 UBE2L5PA0A1B0GUS4 154 aa13.01□□□□□ -0.33
SHMT2-206ENST00000553529 A8MTW9 85 aa13.01□□□□□ -0.33
SHMT2-206ENST00000553529 CXCL3P19876 107 aa13.01□□□□□ -0.33
SHMT2-206ENST00000553529 KIR3DS1Q14943 382 aa13.01□□□□□ -0.33
SHMT2-206ENST00000553529 LINC00305Q7Z4B0 112 aa13.01□□□□□ -0.33
SHMT2-206ENST00000553529 ZNF738Q8NE65 137 aa13.01□□□□□ -0.33
SHMT2-206ENST00000553529 TRAV10A0A0B4J240 114 aa13□□□□□ -0.33
SHMT2-206ENST00000553529 ZNF705GA8MUZ8 300 aaPredicted RBP13□□□□□ -0.33
SHMT2-206ENST00000553529 PRAC2D3DTV9 90 aa13□□□□□ -0.33
SHMT2-206ENST00000553529 GOSR2O14653 212 aa13□□□□□ -0.33
SHMT2-206ENST00000553529 UPK1BO75841 260 aa13□□□□□ -0.33
SHMT2-206ENST00000553529 MEOX2P50222 304 aa13□□□□□ -0.33
SHMT2-206ENST00000553529 OPCMLQ14982 345 aa13□□□□□ -0.33
SHMT2-206ENST00000553529 FAM222AQ5U5X8 452 aa13□□□□□ -0.33
SHMT2-206ENST00000553529 NRARPQ7Z6K4 114 aa13□□□□□ -0.33
SHMT2-206ENST00000553529 DNAH6Q9C0G6 4158 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms