RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 GALR1P47211 349 aa13.9□□□□□ -0.18
DDX54-209ENST00000551912 B9D2Q9BPU9 175 aa13.9□□□□□ -0.18
DDX54-209ENST00000551912 PARD6GQ9BYG4 376 aaPredicted RBP13.9□□□□□ -0.18
DDX54-209ENST00000551912 SRD5A3Q9H8P0 318 aa13.9□□□□□ -0.18
DDX54-209ENST00000551912 ZNF266Q14584 549 aa13.89□□□□□ -0.19
DDX54-209ENST00000551912 FAM24BQ8N5W8 94 aa13.89□□□□□ -0.19
DDX54-209ENST00000551912 MAP6D1Q9H9H5 199 aa13.89□□□□□ -0.19
DDX54-209ENST00000551912 ARPC5O15511 151 aa13.88□□□□□ -0.19
DDX54-209ENST00000551912 RPL7P18124 248 aaKnown RBP13.88□□□□□ -0.19
DDX54-209ENST00000551912 GATAD1Q8WUU5 269 aa13.88□□□□□ -0.19
DDX54-209ENST00000551912 RSG1Q9BU20 258 aa13.88□□□□□ -0.19
DDX54-209ENST00000551912 hCG_2014768A0A024R1R8 64 aa13.87□□□□□ -0.19
DDX54-209ENST00000551912 APRG1Q8IVJ8 170 aa13.87□□□□□ -0.19
DDX54-209ENST00000551912 ZNF688P0C7X2 276 aa13.86□□□□□ -0.19
DDX54-209ENST00000551912 MEOX2P50222 304 aa13.86□□□□□ -0.19
DDX54-209ENST00000551912 DEFB131AP59861 70 aa13.86□□□□□ -0.19
DDX54-209ENST00000551912 SNRPD3P62318 126 aaKnown RBP13.86□□□□□ -0.19
DDX54-209ENST00000551912 SAMD13Q5VXD3 122 aa13.86□□□□□ -0.19
DDX54-209ENST00000551912 ST6GAL2Q96JF0 529 aa13.86□□□□□ -0.19
DDX54-209ENST00000551912 CITED4Q96RK1 184 aa13.86□□□□□ -0.19
DDX54-209ENST00000551912 MFFQ9GZY8 342 aa13.86□□□□□ -0.19
DDX54-209ENST00000551912 SEPSECSQ9HD40 501 aaKnown RBP13.86□□□□□ -0.19
DDX54-209ENST00000551912 DNAH9Q9NYC9 4486 aa13.86□□□□□ -0.19
DDX54-209ENST00000551912 RBMY1BA6NDE4 496 aaKnown RBP13.85□□□□□ -0.19
DDX54-209ENST00000551912 RBMY1EA6NEQ0 496 aaKnown RBP13.85□□□□□ -0.19
DDX54-209ENST00000551912 RBMY1DP0C7P1 496 aaKnown RBP13.85□□□□□ -0.19
DDX54-209ENST00000551912 ATF4P18848 351 aaPredicted RBP13.85□□□□□ -0.19
DDX54-209ENST00000551912 GCSAMLQ5JQS6 135 aa13.85□□□□□ -0.19
DDX54-209ENST00000551912 MORN5Q5VZ52 161 aa13.85□□□□□ -0.19
DDX54-209ENST00000551912 BPIFA4PQ86YQ2 179 aa13.85□□□□□ -0.19
DDX54-209ENST00000551912 HMSDA8MTL9 139 aa13.84□□□□□ -0.19
DDX54-209ENST00000551912 ID1P41134 155 aa13.84□□□□□ -0.19
DDX54-209ENST00000551912 ZNF124Q15973 351 aa13.84□□□□□ -0.19
DDX54-209ENST00000551912 PSMG4Q5JS54 123 aa13.84□□□□□ -0.19
DDX54-209ENST00000551912 FFAR4Q5NUL3 377 aa13.84□□□□□ -0.19
DDX54-209ENST00000551912 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.84□□□□□ -0.19
DDX54-209ENST00000551912 LINC00322Q6ZN03 302 aaPredicted RBP13.84□□□□□ -0.19
DDX54-209ENST00000551912 OR11H4Q8NGC9 324 aa13.84□□□□□ -0.19
DDX54-209ENST00000551912 ASCL2Q99929 193 aa13.84□□□□□ -0.19
DDX54-209ENST00000551912 TIMM9Q9Y5J7 89 aa13.84□□□□□ -0.19
DDX54-209ENST00000551912 BORCS7-ASMTA0A0B4J1R7 106 aa13.83□□□□□ -0.2
DDX54-209ENST00000551912 ISLRO14498 428 aa13.83□□□□□ -0.2
DDX54-209ENST00000551912 SOCS3O14543 225 aa13.83□□□□□ -0.2
DDX54-209ENST00000551912 TAAR5O14804 337 aa13.83□□□□□ -0.2
DDX54-209ENST00000551912 PSMB3P49720 205 aa13.83□□□□□ -0.2
DDX54-209ENST00000551912 FAM78BQ5VT40 261 aa13.83□□□□□ -0.2
DDX54-209ENST00000551912 SBSPONQ8IVN8 264 aa13.83□□□□□ -0.2
DDX54-209ENST00000551912 TCTE3Q8IZS6 198 aa13.83□□□□□ -0.2
DDX54-209ENST00000551912 HSD17B11Q8NBQ5 300 aa13.83□□□□□ -0.2
DDX54-209ENST00000551912 C16orf92Q96LL3 132 aa13.83□□□□□ -0.2
DDX54-209ENST00000551912 C17orf77Q96MU5 243 aa13.83□□□□□ -0.2
DDX54-209ENST00000551912 A0A087X0K7 114 aa13.82□□□□□ -0.2
DDX54-209ENST00000551912 LOC102724200A0A096LPH7 203 aaPredicted RBP13.82□□□□□ -0.2
DDX54-209ENST00000551912 TRAV5A0A0B4J249 113 aa13.82□□□□□ -0.2
DDX54-209ENST00000551912 MRPS12O15235 138 aaKnown RBP13.82□□□□□ -0.2
DDX54-209ENST00000551912 ZNF345Q14585 488 aa13.82□□□□□ -0.2
DDX54-209ENST00000551912 RPL7L1Q6DKI1 246 aaKnown RBP13.82□□□□□ -0.2
DDX54-209ENST00000551912 NHLRC4P0CG21 123 aaPredicted RBP13.81□□□□□ -0.2
DDX54-209ENST00000551912 HAGHQ16775 308 aa13.81□□□□□ -0.2
DDX54-209ENST00000551912 AKAP14Q86UN6 197 aa13.81□□□□□ -0.2
DDX54-209ENST00000551912 LINC00052Q96N35 136 aa13.81□□□□□ -0.2
DDX54-209ENST00000551912 MRPL32Q9BYC8 188 aaKnown RBP13.81□□□□□ -0.2
DDX54-209ENST00000551912 RFNGQ9Y644 331 aa13.81□□□□□ -0.2
DDX54-209ENST00000551912 TGP01266 2768 aa13.81□□□□□ -0.2
DDX54-209ENST00000551912 ATP6V0CP27449 155 aa13.8□□□□□ -0.2
DDX54-209ENST00000551912 ACOT6Q3I5F7 207 aaPredicted RBP13.8□□□□□ -0.2
DDX54-209ENST00000551912 KCNRGQ8N5I3 272 aa13.8□□□□□ -0.2
DDX54-209ENST00000551912 PSMG3Q9BT73 122 aaPredicted RBP13.8□□□□□ -0.2
DDX54-209ENST00000551912 FUT9Q9Y231 359 aa13.8□□□□□ -0.2
DDX54-209ENST00000551912 A0A0D9SG52 128 aa13.79□□□□□ -0.2
DDX54-209ENST00000551912 A0A1B0GVG6 124 aa13.79□□□□□ -0.2
DDX54-209ENST00000551912 JTBO76095 146 aa13.79□□□□□ -0.2
DDX54-209ENST00000551912 IGLC2P0DOY2 106 aa13.79□□□□□ -0.2
DDX54-209ENST00000551912 RPL35AP18077 110 aaKnown RBP13.79□□□□□ -0.2
DDX54-209ENST00000551912 CXCL2P19875 107 aa13.79□□□□□ -0.2
DDX54-209ENST00000551912 M6PRP20645 277 aa13.79□□□□□ -0.2
DDX54-209ENST00000551912 SPATA31B1PQ5VZV4 182 aa13.79□□□□□ -0.2
DDX54-209ENST00000551912 LCN15Q6UWW0 184 aa13.79□□□□□ -0.2
DDX54-209ENST00000551912 MIR17HGQ75NE6 70 aa13.79□□□□□ -0.2
DDX54-209ENST00000551912 STHQ8IWL8 128 aa13.79□□□□□ -0.2
DDX54-209ENST00000551912 OR2G3Q8NGZ4 309 aa13.79□□□□□ -0.2
DDX54-209ENST00000551912 LRRC20Q8TCA0 184 aa13.79□□□□□ -0.2
DDX54-209ENST00000551912 GNPNAT1Q96EK6 184 aaPredicted RBP13.79□□□□□ -0.2
DDX54-209ENST00000551912 HRH4Q9H3N8 390 aa13.79□□□□□ -0.2
DDX54-209ENST00000551912 KNCNA6PVL3 124 aa13.78□□□□□ -0.2
DDX54-209ENST00000551912 APOC4P55056 127 aa13.78□□□□□ -0.2
DDX54-209ENST00000551912 RHOBP62745 196 aa13.78□□□□□ -0.2
DDX54-209ENST00000551912 SERF2P84101 59 aa13.78□□□□□ -0.2
DDX54-209ENST00000551912 ACTL10Q5JWF8 245 aa13.78□□□□□ -0.2
DDX54-209ENST00000551912 ARPC5LQ9BPX5 153 aa13.78□□□□□ -0.2
DDX54-209ENST00000551912 SLC25A2Q9BXI2 301 aa13.78□□□□□ -0.2
DDX54-209ENST00000551912 TMEM14CQ9P0S9 112 aa13.78□□□□□ -0.2
DDX54-209ENST00000551912 COL7A1Q02388 2944 aa13.77□□□□□ -0.2
DDX54-209ENST00000551912 TRAV8-2A0A0B4J237 113 aa13.77□□□□□ -0.21
DDX54-209ENST00000551912 SNRPCP09234 159 aaKnown RBP13.77□□□□□ -0.21
DDX54-209ENST00000551912 GUK1Q16774 197 aa13.77□□□□□ -0.21
DDX54-209ENST00000551912 FAM167A-AS1Q96KT0 104 aa13.77□□□□□ -0.21
DDX54-209ENST00000551912 C20orf173Q96LM9 149 aa13.77□□□□□ -0.21
DDX54-209ENST00000551912 TM2D3Q9BRN9 247 aa13.77□□□□□ -0.21
DDX54-209ENST00000551912 SLC50A1Q9BRV3 221 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms