RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 SLC25A22Q9H936 323 aa13.24□□□□□ -0.29
TSFM-208ENST00000543727 DOK5Q9P104 306 aa13.24□□□□□ -0.29
TSFM-208ENST00000543727 ISLRO14498 428 aa13.23□□□□□ -0.29
TSFM-208ENST00000543727 COX7A2P2O60397 106 aa13.23□□□□□ -0.29
TSFM-208ENST00000543727 ZNF688P0C7X2 276 aa13.23□□□□□ -0.29
TSFM-208ENST00000543727 Q6ZWC4 215 aa13.23□□□□□ -0.29
TSFM-208ENST00000543727 FAM24BQ8N5W8 94 aa13.23□□□□□ -0.29
TSFM-208ENST00000543727 ATP5SQ99766 215 aa13.23□□□□□ -0.29
TSFM-208ENST00000543727 SCRT1Q9BWW7 348 aa13.23□□□□□ -0.29
TSFM-208ENST00000543727 NPCDR1Q9BY65 106 aa13.23□□□□□ -0.29
TSFM-208ENST00000543727 B2MP61769 119 aa13.22□□□□□ -0.29
TSFM-208ENST00000543727 CLINT1Q14677 625 aa13.22□□□□□ -0.29
TSFM-208ENST00000543727 C10orf113Q5VZT2 155 aa13.22□□□□□ -0.29
TSFM-208ENST00000543727 LINC00305Q7Z4B0 112 aa13.22□□□□□ -0.29
TSFM-208ENST00000543727 STHQ8IWL8 128 aa13.22□□□□□ -0.29
TSFM-208ENST00000543727 PARD6GQ9BYG4 376 aaPredicted RBP13.22□□□□□ -0.29
TSFM-208ENST00000543727 DNAJC4Q9NNZ3 241 aa13.22□□□□□ -0.29
TSFM-208ENST00000543727 SLC39A9Q9NUM3 307 aa13.22□□□□□ -0.29
TSFM-208ENST00000543727 TP53TG1Q9Y2A0 90 aa13.22□□□□□ -0.29
TSFM-208ENST00000543727 C17orf112F2Z3M2 114 aa13.21□□□□□ -0.29
TSFM-208ENST00000543727 SOCS3O14543 225 aa13.21□□□□□ -0.29
TSFM-208ENST00000543727 ATF4P18848 351 aaPredicted RBP13.21□□□□□ -0.29
TSFM-208ENST00000543727 TMEM41BQ5BJD5 291 aa13.21□□□□□ -0.29
TSFM-208ENST00000543727 PSMG4Q5JS54 123 aa13.21□□□□□ -0.29
TSFM-208ENST00000543727 MIC13Q5XKP0 118 aa13.21□□□□□ -0.29
TSFM-208ENST00000543727 PATE2Q6UY27 113 aa13.21□□□□□ -0.29
TSFM-208ENST00000543727 ZNF709Q8N972 641 aa13.21□□□□□ -0.29
TSFM-208ENST00000543727 GATAD1Q8WUU5 269 aa13.21□□□□□ -0.29
TSFM-208ENST00000543727 WWC2-AS2Q96NR7 200 aa13.21□□□□□ -0.29
TSFM-208ENST00000543727 UHRF2Q96PU4 802 aa13.21□□□□□ -0.29
TSFM-208ENST00000543727 WDR61Q9GZS3 305 aaKnown RBP13.21□□□□□ -0.29
TSFM-208ENST00000543727 PXMP4Q9Y6I8 212 aa13.21□□□□□ -0.29
TSFM-208ENST00000543727 A0A087X0K7 114 aa13.2□□□□□ -0.3
TSFM-208ENST00000543727 CXCL2P19875 107 aa13.2□□□□□ -0.3
TSFM-208ENST00000543727 SPATA31B1PQ5VZV4 182 aa13.2□□□□□ -0.3
TSFM-208ENST00000543727 BPIFA4PQ86YQ2 179 aa13.2□□□□□ -0.3
TSFM-208ENST00000543727 TMEM37Q8WXS4 190 aa13.2□□□□□ -0.3
TSFM-208ENST00000543727 AQP10Q96PS8 301 aa13.2□□□□□ -0.3
TSFM-208ENST00000543727 IFNA5P01569 189 aa13.19□□□□□ -0.3
TSFM-208ENST00000543727 SPP1P10451 314 aa13.19□□□□□ -0.3
TSFM-208ENST00000543727 LEMD1Q68G75 181 aa13.19□□□□□ -0.3
TSFM-208ENST00000543727 MORN3Q6PF18 240 aaPredicted RBP13.19□□□□□ -0.3
TSFM-208ENST00000543727 RSG1Q9BU20 258 aa13.19□□□□□ -0.3
TSFM-208ENST00000543727 CSTL1Q9H114 145 aa13.19□□□□□ -0.3
TSFM-208ENST00000543727 ZNF266Q14584 549 aa13.18□□□□□ -0.3
TSFM-208ENST00000543727 ZNF124Q15973 351 aa13.18□□□□□ -0.3
TSFM-208ENST00000543727 TRPT1Q86TN4 253 aaKnown RBP13.18□□□□□ -0.3
TSFM-208ENST00000543727 SCGB1C1Q8TD33 95 aa13.18□□□□□ -0.3
TSFM-208ENST00000543727 C16orf92Q96LL3 132 aa13.18□□□□□ -0.3
TSFM-208ENST00000543727 RPL35AP18077 110 aaKnown RBP13.17□□□□□ -0.3
TSFM-208ENST00000543727 LCN15Q6UWW0 184 aa13.17□□□□□ -0.3
TSFM-208ENST00000543727 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.17□□□□□ -0.3
TSFM-208ENST00000543727 INO80EQ8NBZ0 244 aaPredicted RBP13.17□□□□□ -0.3
TSFM-208ENST00000543727 OR2T35Q8NGX2 323 aa13.17□□□□□ -0.3
TSFM-208ENST00000543727 CLUHP3Q96NS8 147 aa13.17□□□□□ -0.3
TSFM-208ENST00000543727 RPRMQ9NS64 109 aa13.17□□□□□ -0.3
TSFM-208ENST00000543727 AGRNO00468 2067 aa13.17□□□□□ -0.3
TSFM-208ENST00000543727 STAB2Q8WWQ8 2551 aa13.17□□□□□ -0.3
TSFM-208ENST00000543727 MRPS12O15235 138 aaKnown RBP13.16□□□□□ -0.3
TSFM-208ENST00000543727 HLA-DRB4P13762 266 aa13.16□□□□□ -0.3
TSFM-208ENST00000543727 NUTF2P61970 127 aaKnown RBP13.16□□□□□ -0.3
TSFM-208ENST00000543727 GUK1Q16774 197 aa13.16□□□□□ -0.3
TSFM-208ENST00000543727 ACTL10Q5JWF8 245 aa13.16□□□□□ -0.3
TSFM-208ENST00000543727 FOXI2Q6ZQN5 318 aa13.16□□□□□ -0.3
TSFM-208ENST00000543727 CLEC5AQ9NY25 188 aa13.16□□□□□ -0.3
TSFM-208ENST00000543727 HLA-DRB4X5D2U9 266 aa13.16□□□□□ -0.3
TSFM-208ENST00000543727 DNAH9Q9NYC9 4486 aa13.15□□□□□ -0.3
TSFM-208ENST00000543727 TENM3Q9P273 2699 aa13.15□□□□□ -0.3
TSFM-208ENST00000543727 RNF183Q96D59 192 aa13.15□□□□□ -0.3
TSFM-208ENST00000543727 LINC00052Q96N35 136 aa13.15□□□□□ -0.3
TSFM-208ENST00000543727 SLC50A1Q9BRV3 221 aa13.15□□□□□ -0.3
TSFM-208ENST00000543727 MRPL32Q9BYC8 188 aaKnown RBP13.15□□□□□ -0.3
TSFM-208ENST00000543727 HRH4Q9H3N8 390 aa13.15□□□□□ -0.3
TSFM-208ENST00000543727 SAV1Q9H4B6 383 aaPredicted RBP13.15□□□□□ -0.3
TSFM-208ENST00000543727 H3BMM0 161 aa13.14□□□□□ -0.31
TSFM-208ENST00000543727 SPRY2O43597 315 aa13.14□□□□□ -0.31
TSFM-208ENST00000543727 C17orf77Q96MU5 243 aa13.14□□□□□ -0.31
TSFM-208ENST00000543727 OVOL2Q9BRP0 275 aa13.14□□□□□ -0.31
TSFM-208ENST00000543727 C1QTNF4Q9BXJ3 329 aa13.14□□□□□ -0.31
TSFM-208ENST00000543727 SMIM3Q9BZL3 60 aa13.14□□□□□ -0.31
TSFM-208ENST00000543727 TMEM14CQ9P0S9 112 aa13.14□□□□□ -0.31
TSFM-208ENST00000543727 TIMM9Q9Y5J7 89 aa13.14□□□□□ -0.31
TSFM-208ENST00000543727 KNCNA6PVL3 124 aa13.13□□□□□ -0.31
TSFM-208ENST00000543727 ZNF253O75346 499 aa13.13□□□□□ -0.31
TSFM-208ENST00000543727 CA1P00915 261 aaPredicted RBP13.13□□□□□ -0.31
TSFM-208ENST00000543727 DEFB135Q30KP9 77 aa13.13□□□□□ -0.31
TSFM-208ENST00000543727 EBLN2Q6P2I7 272 aa13.13□□□□□ -0.31
TSFM-208ENST00000543727 TNFSF18Q9UNG2 199 aa13.13□□□□□ -0.31
TSFM-208ENST00000543727 FXYD6-FXYD2A0A087WZ82 144 aa13.12□□□□□ -0.31
TSFM-208ENST00000543727 IGLC2P0DOY2 106 aa13.12□□□□□ -0.31
TSFM-208ENST00000543727 FAM78BQ5VT40 261 aa13.12□□□□□ -0.31
TSFM-208ENST00000543727 MORN5Q5VZ52 161 aa13.12□□□□□ -0.31
TSFM-208ENST00000543727 LRRC20Q8TCA0 184 aa13.12□□□□□ -0.31
TSFM-208ENST00000543727 EDA2RQ9HAV5 297 aa13.12□□□□□ -0.31
TSFM-208ENST00000543727 RETNQ9HD89 108 aa13.12□□□□□ -0.31
TSFM-208ENST00000543727 NBEAL2Q6ZNJ1 2754 aa13.11□□□□□ -0.31
TSFM-208ENST00000543727 PDE6HQ13956 83 aa13.11□□□□□ -0.31
TSFM-208ENST00000543727 Q5BKY6 102 aa13.11□□□□□ -0.31
TSFM-208ENST00000543727 WFDC1Q9HC57 220 aa13.11□□□□□ -0.31
TSFM-208ENST00000543727 ZNF331Q9NQX6 463 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms