RNA–Protein interactions for RNA: ENST00000542661.1

DDX11-221, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-221ENST00000542661 ARV1Q9H2C2 271 aa10.51□□□□□ -0.73
DDX11-221ENST00000542661 SLC25A32Q9H2D1 315 aa10.51□□□□□ -0.73
DDX11-221ENST00000542661 DNAJC4Q9NNZ3 241 aa10.51□□□□□ -0.73
DDX11-221ENST00000542661 KCNIP2Q9NS61 270 aa10.51□□□□□ -0.73
DDX11-221ENST00000542661 UBE2CO00762 179 aa10.5□□□□□ -0.73
DDX11-221ENST00000542661 ZNF688P0C7X2 276 aa10.5□□□□□ -0.73
DDX11-221ENST00000542661 RPL7P18124 248 aaKnown RBP10.5□□□□□ -0.73
DDX11-221ENST00000542661 OPCMLQ14982 345 aa10.5□□□□□ -0.73
DDX11-221ENST00000542661 C10orf113Q5VZT2 155 aa10.5□□□□□ -0.73
DDX11-221ENST00000542661 PATE2Q6UY27 113 aa10.5□□□□□ -0.73
DDX11-221ENST00000542661 FAM24BQ8N5W8 94 aa10.5□□□□□ -0.73
DDX11-221ENST00000542661 ZNF709Q8N972 641 aa10.5□□□□□ -0.73
DDX11-221ENST00000542661 PFDN5Q99471 154 aa10.5□□□□□ -0.73
DDX11-221ENST00000542661 ATP5SQ99766 215 aa10.5□□□□□ -0.73
DDX11-221ENST00000542661 RSG1Q9BU20 258 aa10.5□□□□□ -0.73
DDX11-221ENST00000542661 SCRT1Q9BWW7 348 aa10.5□□□□□ -0.73
DDX11-221ENST00000542661 NPCDR1Q9BY65 106 aa10.5□□□□□ -0.73
DDX11-221ENST00000542661 SLC39A9Q9NUM3 307 aa10.5□□□□□ -0.73
DDX11-221ENST00000542661 HUWE1Q7Z6Z7 4374 aaKnown RBP10.5□□□□□ -0.73
DDX11-221ENST00000542661 ISLRO14498 428 aa10.49□□□□□ -0.73
DDX11-221ENST00000542661 ATF4P18848 351 aaPredicted RBP10.49□□□□□ -0.73
DDX11-221ENST00000542661 PSMB3P49720 205 aa10.49□□□□□ -0.73
DDX11-221ENST00000542661 B2MP61769 119 aa10.49□□□□□ -0.73
DDX11-221ENST00000542661 PSMG4Q5JS54 123 aa10.49□□□□□ -0.73
DDX11-221ENST00000542661 MIC13Q5XKP0 118 aa10.49□□□□□ -0.73
DDX11-221ENST00000542661 LEMD1Q68G75 181 aa10.49□□□□□ -0.73
DDX11-221ENST00000542661 LINC00305Q7Z4B0 112 aa10.49□□□□□ -0.73
DDX11-221ENST00000542661 RCHY1Q96PM5 261 aa10.49□□□□□ -0.73
DDX11-221ENST00000542661 UHRF2Q96PU4 802 aa10.49□□□□□ -0.73
DDX11-221ENST00000542661 PXMP4Q9Y6I8 212 aa10.49□□□□□ -0.73
DDX11-221ENST00000542661 C17orf112F2Z3M2 114 aa10.48□□□□□ -0.73
DDX11-221ENST00000542661 IFNA5P01569 189 aa10.48□□□□□ -0.73
DDX11-221ENST00000542661 STHQ8IWL8 128 aa10.48□□□□□ -0.73
DDX11-221ENST00000542661 SCGB1C1Q8TD33 95 aa10.48□□□□□ -0.73
DDX11-221ENST00000542661 TMEM37Q8WXS4 190 aa10.48□□□□□ -0.73
DDX11-221ENST00000542661 WDR61Q9GZS3 305 aaKnown RBP10.48□□□□□ -0.73
DDX11-221ENST00000542661 RPL35AP18077 110 aaKnown RBP10.47□□□□□ -0.73
DDX11-221ENST00000542661 ZNF124Q15973 351 aa10.47□□□□□ -0.73
DDX11-221ENST00000542661 Q6ZWC4 215 aa10.47□□□□□ -0.73
DDX11-221ENST00000542661 BPIFA4PQ86YQ2 179 aa10.47□□□□□ -0.73
DDX11-221ENST00000542661 INO80EQ8NBZ0 244 aaPredicted RBP10.47□□□□□ -0.73
DDX11-221ENST00000542661 OR2T35Q8NGX2 323 aa10.47□□□□□ -0.73
DDX11-221ENST00000542661 GATAD1Q8WUU5 269 aa10.47□□□□□ -0.73
DDX11-221ENST00000542661 C16orf92Q96LL3 132 aa10.47□□□□□ -0.73
DDX11-221ENST00000542661 AQP10Q96PS8 301 aa10.47□□□□□ -0.73
DDX11-221ENST00000542661 CSTL1Q9H114 145 aa10.47□□□□□ -0.73
DDX11-221ENST00000542661 SOCS3O14543 225 aa10.46□□□□□ -0.73
DDX11-221ENST00000542661 LINC00052Q96N35 136 aa10.46□□□□□ -0.73
DDX11-221ENST00000542661 PARD6GQ9BYG4 376 aaPredicted RBP10.46□□□□□ -0.73
DDX11-221ENST00000542661 SMIM3Q9BZL3 60 aa10.46□□□□□ -0.73
DDX11-221ENST00000542661 A0A087X0K7 114 aa10.45□□□□□ -0.74
DDX11-221ENST00000542661 ACTL10Q5JWF8 245 aa10.45□□□□□ -0.74
DDX11-221ENST00000542661 SPATA31B1PQ5VZV4 182 aa10.45□□□□□ -0.74
DDX11-221ENST00000542661 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.45□□□□□ -0.74
DDX11-221ENST00000542661 RPRMQ9NS64 109 aa10.45□□□□□ -0.74
DDX11-221ENST00000542661 TP53TG1Q9Y2A0 90 aa10.45□□□□□ -0.74
DDX11-221ENST00000542661 KNCNA6PVL3 124 aa10.44□□□□□ -0.74
DDX11-221ENST00000542661 SPP1P10451 314 aa10.44□□□□□ -0.74
DDX11-221ENST00000542661 CXCL2P19875 107 aa10.44□□□□□ -0.74
DDX11-221ENST00000542661 ZNF266Q14584 549 aa10.44□□□□□ -0.74
DDX11-221ENST00000542661 TMEM41BQ5BJD5 291 aa10.44□□□□□ -0.74
DDX11-221ENST00000542661 Q5BKY6 102 aa10.44□□□□□ -0.74
DDX11-221ENST00000542661 MORN3Q6PF18 240 aaPredicted RBP10.44□□□□□ -0.74
DDX11-221ENST00000542661 TRPT1Q86TN4 253 aaKnown RBP10.44□□□□□ -0.74
DDX11-221ENST00000542661 LRRC20Q8TCA0 184 aa10.44□□□□□ -0.74
DDX11-221ENST00000542661 WWC2-AS2Q96NR7 200 aa10.44□□□□□ -0.74
DDX11-221ENST00000542661 FXYD6-FXYD2A0A087WZ82 144 aa10.43□□□□□ -0.74
DDX11-221ENST00000542661 SPRY2O43597 315 aa10.43□□□□□ -0.74
DDX11-221ENST00000542661 NUTF2P61970 127 aaKnown RBP10.43□□□□□ -0.74
DDX11-221ENST00000542661 GUK1Q16774 197 aa10.43□□□□□ -0.74
DDX11-221ENST00000542661 EBLN2Q6P2I7 272 aa10.43□□□□□ -0.74
DDX11-221ENST00000542661 LCN15Q6UWW0 184 aa10.43□□□□□ -0.74
DDX11-221ENST00000542661 FOXI2Q6ZQN5 318 aa10.43□□□□□ -0.74
DDX11-221ENST00000542661 C17orf77Q96MU5 243 aa10.43□□□□□ -0.74
DDX11-221ENST00000542661 WFDC1Q9HC57 220 aa10.43□□□□□ -0.74
DDX11-221ENST00000542661 AGRNO00468 2067 aa10.42□□□□□ -0.74
DDX11-221ENST00000542661 H3BMM0 161 aa10.42□□□□□ -0.74
DDX11-221ENST00000542661 MRPS12O15235 138 aaKnown RBP10.42□□□□□ -0.74
DDX11-221ENST00000542661 CA1P00915 261 aaPredicted RBP10.42□□□□□ -0.74
DDX11-221ENST00000542661 HLA-DRB4P13762 266 aa10.42□□□□□ -0.74
DDX11-221ENST00000542661 DEFB135Q30KP9 77 aa10.42□□□□□ -0.74
DDX11-221ENST00000542661 FAM78BQ5VT40 261 aa10.42□□□□□ -0.74
DDX11-221ENST00000542661 MORN5Q5VZ52 161 aa10.42□□□□□ -0.74
DDX11-221ENST00000542661 RNF183Q96D59 192 aa10.42□□□□□ -0.74
DDX11-221ENST00000542661 OVOL2Q9BRP0 275 aa10.42□□□□□ -0.74
DDX11-221ENST00000542661 SLC50A1Q9BRV3 221 aa10.42□□□□□ -0.74
DDX11-221ENST00000542661 HRH4Q9H3N8 390 aa10.42□□□□□ -0.74
DDX11-221ENST00000542661 SAV1Q9H4B6 383 aaPredicted RBP10.42□□□□□ -0.74
DDX11-221ENST00000542661 RETNQ9HD89 108 aa10.42□□□□□ -0.74
DDX11-221ENST00000542661 TNFSF18Q9UNG2 199 aa10.42□□□□□ -0.74
DDX11-221ENST00000542661 HLA-DRB4X5D2U9 266 aa10.42□□□□□ -0.74
DDX11-221ENST00000542661 DNAH7Q8WXX0 4024 aa10.42□□□□□ -0.74
DDX11-221ENST00000542661 TRAV5A0A0B4J249 113 aa10.41□□□□□ -0.74
DDX11-221ENST00000542661 IGLC2P0DOY2 106 aa10.41□□□□□ -0.74
DDX11-221ENST00000542661 GCSAMLQ5JQS6 135 aa10.41□□□□□ -0.74
DDX11-221ENST00000542661 FFAR4Q5NUL3 377 aa10.41□□□□□ -0.74
DDX11-221ENST00000542661 CLUHP3Q96NS8 147 aa10.41□□□□□ -0.74
DDX11-221ENST00000542661 MRPL32Q9BYC8 188 aaKnown RBP10.41□□□□□ -0.74
DDX11-221ENST00000542661 CLEC5AQ9NY25 188 aa10.41□□□□□ -0.74
DDX11-221ENST00000542661 TMEM14CQ9P0S9 112 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms