RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 H0YIZ8 118 aa9.58□□□□□ -0.88
LTBR-208ENST00000541005 H3BMM0 161 aa9.58□□□□□ -0.88
LTBR-208ENST00000541005 OR5G3P0C626 314 aa9.58□□□□□ -0.88
LTBR-208ENST00000541005 C4BPBP20851 252 aa9.58□□□□□ -0.88
LTBR-208ENST00000541005 CAMLGP49069 296 aa9.58□□□□□ -0.88
LTBR-208ENST00000541005 RAB31Q13636 194 aa9.58□□□□□ -0.88
LTBR-208ENST00000541005 ATP6V1FQ16864 119 aa9.58□□□□□ -0.88
LTBR-208ENST00000541005 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.58□□□□□ -0.88
LTBR-208ENST00000541005 PATE2Q6UY27 113 aa9.58□□□□□ -0.88
LTBR-208ENST00000541005 FOXI2Q6ZQN5 318 aa9.58□□□□□ -0.88
LTBR-208ENST00000541005 PPP1R1CQ8WVI7 109 aa9.58□□□□□ -0.88
LTBR-208ENST00000541005 CLUHP3Q96NS8 147 aa9.58□□□□□ -0.88
LTBR-208ENST00000541005 UHRF2Q96PU4 802 aa9.58□□□□□ -0.88
LTBR-208ENST00000541005 SLC25A31Q9H0C2 315 aa9.58□□□□□ -0.88
LTBR-208ENST00000541005 ARL6Q9H0F7 186 aa9.58□□□□□ -0.88
LTBR-208ENST00000541005 ARV1Q9H2C2 271 aa9.58□□□□□ -0.88
LTBR-208ENST00000541005 OR5AC2Q9NZP5 309 aa9.58□□□□□ -0.88
LTBR-208ENST00000541005 TENM2Q9NT68 2774 aa9.58□□□□□ -0.88
LTBR-208ENST00000541005 ELOA3CA0A087WX78 387 aaPredicted RBP9.57□□□□□ -0.88
LTBR-208ENST00000541005 A0A087X0K7 114 aa9.57□□□□□ -0.88
LTBR-208ENST00000541005 UBE2L5PA0A1B0GUS4 154 aa9.57□□□□□ -0.88
LTBR-208ENST00000541005 MPDU1O75352 247 aa9.57□□□□□ -0.88
LTBR-208ENST00000541005 RLN2P04090 185 aa9.57□□□□□ -0.88
LTBR-208ENST00000541005 PRR20EP86478 221 aa9.57□□□□□ -0.88
LTBR-208ENST00000541005 PRR20CP86479 221 aa9.57□□□□□ -0.88
LTBR-208ENST00000541005 PRR20DP86480 221 aa9.57□□□□□ -0.88
LTBR-208ENST00000541005 PRR20BP86481 221 aa9.57□□□□□ -0.88
LTBR-208ENST00000541005 PRR20AP86496 221 aa9.57□□□□□ -0.88
LTBR-208ENST00000541005 BAXQ07812 192 aa9.57□□□□□ -0.88
LTBR-208ENST00000541005 SPATA31B1PQ5VZV4 182 aa9.57□□□□□ -0.88
LTBR-208ENST00000541005 RSG1Q9BU20 258 aa9.57□□□□□ -0.88
LTBR-208ENST00000541005 SAV1Q9H4B6 383 aaPredicted RBP9.57□□□□□ -0.88
LTBR-208ENST00000541005 A0A0J9YWU9 116 aa9.56□□□□□ -0.88
LTBR-208ENST00000541005 MRPS12O15235 138 aaKnown RBP9.56□□□□□ -0.88
LTBR-208ENST00000541005 PET100P0DJ07 73 aa9.56□□□□□ -0.88
LTBR-208ENST00000541005 RPL29P47914 159 aaKnown RBP9.56□□□□□ -0.88
LTBR-208ENST00000541005 EWSR1Q01844 656 aaKnown RBP eCLIP9.56□□□□□ -0.88
LTBR-208ENST00000541005 OPCMLQ14982 345 aa9.56□□□□□ -0.88
LTBR-208ENST00000541005 LRRC37A5PQ49AS3 106 aa9.56□□□□□ -0.88
LTBR-208ENST00000541005 TMEM37Q8WXS4 190 aa9.56□□□□□ -0.88
LTBR-208ENST00000541005 RNF126Q9BV68 326 aa9.56□□□□□ -0.88
LTBR-208ENST00000541005 C11orf68Q9H3H3 251 aaKnown RBP9.56□□□□□ -0.88
LTBR-208ENST00000541005 ALG5Q9Y673 324 aa9.56□□□□□ -0.88
LTBR-208ENST00000541005 A8MTW9 85 aa9.55□□□□□ -0.88
LTBR-208ENST00000541005 COX7A2P2O60397 106 aa9.55□□□□□ -0.88
LTBR-208ENST00000541005 MPC2O95563 127 aa9.55□□□□□ -0.88
LTBR-208ENST00000541005 NHLH2Q02577 135 aa9.55□□□□□ -0.88
LTBR-208ENST00000541005 GDF5OSQ5U4N7 250 aa9.55□□□□□ -0.88
LTBR-208ENST00000541005 MIC13Q5XKP0 118 aa9.55□□□□□ -0.88
LTBR-208ENST00000541005 LINC00305Q7Z4B0 112 aa9.55□□□□□ -0.88
LTBR-208ENST00000541005 CSNK1G2-AS1Q8NCQ2 148 aa9.55□□□□□ -0.88
LTBR-208ENST00000541005 OR5C1Q8NGR4 320 aa9.55□□□□□ -0.88
LTBR-208ENST00000541005 OR11H2Q8NH07 326 aa9.55□□□□□ -0.88
LTBR-208ENST00000541005 C16orf92Q96LL3 132 aa9.55□□□□□ -0.88
LTBR-208ENST00000541005 C20orf173Q96LM9 149 aa9.55□□□□□ -0.88
LTBR-208ENST00000541005 LINC00052Q96N35 136 aa9.55□□□□□ -0.88
LTBR-208ENST00000541005 RARRES2Q99969 163 aa9.55□□□□□ -0.88
LTBR-208ENST00000541005 TRAV8-2A0A0B4J237 113 aa9.54□□□□□ -0.88
LTBR-208ENST00000541005 ZNF705EA8MWA4 302 aaPredicted RBP9.54□□□□□ -0.88
LTBR-208ENST00000541005 CXCL2P19875 107 aa9.54□□□□□ -0.88
LTBR-208ENST00000541005 FGF7P21781 194 aa9.54□□□□□ -0.88
LTBR-208ENST00000541005 NUTF2P61970 127 aaKnown RBP9.54□□□□□ -0.88
LTBR-208ENST00000541005 C10orf113Q5VZT2 155 aa9.54□□□□□ -0.88
LTBR-208ENST00000541005 ZFAND6Q6FIF0 208 aa9.54□□□□□ -0.88
LTBR-208ENST00000541005 Q6ZRG5 221 aa9.54□□□□□ -0.88
LTBR-208ENST00000541005 OR1L4Q8NGR5 311 aa9.54□□□□□ -0.88
LTBR-208ENST00000541005 PFDN5Q99471 154 aa9.54□□□□□ -0.88
LTBR-208ENST00000541005 C1QTNF4Q9BXJ3 329 aa9.54□□□□□ -0.88
LTBR-208ENST00000541005 NPCDR1Q9BY65 106 aa9.54□□□□□ -0.88
LTBR-208ENST00000541005 DNAJC4Q9NNZ3 241 aa9.54□□□□□ -0.88
LTBR-208ENST00000541005 RPRMQ9NS64 109 aa9.54□□□□□ -0.88
LTBR-208ENST00000541005 SLC39A9Q9NUM3 307 aa9.54□□□□□ -0.88
LTBR-208ENST00000541005 A0A0J9YX75 114 aa9.53□□□□□ -0.88
LTBR-208ENST00000541005 CXCL3P19876 107 aa9.53□□□□□ -0.88
LTBR-208ENST00000541005 DEFB1P60022 68 aa9.53□□□□□ -0.88
LTBR-208ENST00000541005 B2MP61769 119 aa9.53□□□□□ -0.88
LTBR-208ENST00000541005 MBD2Q9UBB5 411 aa9.53□□□□□ -0.88
LTBR-208ENST00000541005 PXMP4Q9Y6I8 212 aa9.53□□□□□ -0.88
LTBR-208ENST00000541005 MORN5Q5VZ52 161 aa9.52□□□□□ -0.89
LTBR-208ENST00000541005 EBLN2Q6P2I7 272 aa9.52□□□□□ -0.89
LTBR-208ENST00000541005 LCN15Q6UWW0 184 aa9.52□□□□□ -0.89
LTBR-208ENST00000541005 BPIFA4PQ86YQ2 179 aa9.52□□□□□ -0.89
LTBR-208ENST00000541005 ZNF709Q8N972 641 aa9.52□□□□□ -0.89
LTBR-208ENST00000541005 Q8NAQ8 132 aa9.52□□□□□ -0.89
LTBR-208ENST00000541005 KCNIP2Q9NS61 270 aa9.52□□□□□ -0.89
LTBR-208ENST00000541005 HSPB11Q9Y547 144 aa9.52□□□□□ -0.89
LTBR-208ENST00000541005 KMT2CQ8NEZ4 4911 aaKnown RBP9.52□□□□□ -0.89
LTBR-208ENST00000541005 F6UB75 175 aa9.51□□□□□ -0.89
LTBR-208ENST00000541005 IGLC2P0DOY2 106 aa9.51□□□□□ -0.89
LTBR-208ENST00000541005 MIFP14174 115 aa9.51□□□□□ -0.89
LTBR-208ENST00000541005 CLINT1Q14677 625 aa9.51□□□□□ -0.89
LTBR-208ENST00000541005 FAM78BQ5VT40 261 aa9.51□□□□□ -0.89
LTBR-208ENST00000541005 RNF182Q8N6D2 247 aa9.51□□□□□ -0.89
LTBR-208ENST00000541005 OR11H7Q8NGC8 314 aa9.51□□□□□ -0.89
LTBR-208ENST00000541005 THAP6Q8TBB0 222 aa9.51□□□□□ -0.89
LTBR-208ENST00000541005 ASB13Q8WXK3 278 aa9.51□□□□□ -0.89
LTBR-208ENST00000541005 ATP5SQ99766 215 aa9.51□□□□□ -0.89
LTBR-208ENST00000541005 SLC50A1Q9BRV3 221 aa9.51□□□□□ -0.89
LTBR-208ENST00000541005 WDR61Q9GZS3 305 aaKnown RBP9.51□□□□□ -0.89
LTBR-208ENST00000541005 HRH4Q9H3N8 390 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms