RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 IGF2BP2-AS1Q96M15 143 aa10.94□□□□□ -0.66
UBE3B-211ENST00000539843 PSENENQ9NZ42 101 aa10.94□□□□□ -0.66
UBE3B-211ENST00000539843 HIGD1AQ9Y241 93 aa10.94□□□□□ -0.66
UBE3B-211ENST00000539843 YTHDF2Q9Y5A9 579 aaKnown RBP10.94□□□□□ -0.66
UBE3B-211ENST00000539843 GSG1LQ6UXU4 331 aa10.93□□□□□ -0.66
UBE3B-211ENST00000539843 CYP2G1PQ6ZSU1 146 aa10.93□□□□□ -0.66
UBE3B-211ENST00000539843 ZNF738Q8NE65 137 aa10.93□□□□□ -0.66
UBE3B-211ENST00000539843 MGAT4CQ9UBM8 478 aa10.93□□□□□ -0.66
UBE3B-211ENST00000539843 FRAS1Q86XX4 4008 aa10.93□□□□□ -0.66
UBE3B-211ENST00000539843 HYPMO75409 117 aa10.92□□□□□ -0.66
UBE3B-211ENST00000539843 OR5G3P0C626 314 aa10.92□□□□□ -0.66
UBE3B-211ENST00000539843 LGALS9BQ3B8N2 356 aa10.92□□□□□ -0.66
UBE3B-211ENST00000539843 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.92□□□□□ -0.66
UBE3B-211ENST00000539843 C9orf170A2RU37 121 aa10.91□□□□□ -0.66
UBE3B-211ENST00000539843 PRSS29PA6NIE9 313 aa10.91□□□□□ -0.66
UBE3B-211ENST00000539843 PRSS46E5RG02 174 aa10.91□□□□□ -0.66
UBE3B-211ENST00000539843 M0R2N4 97 aa10.91□□□□□ -0.66
UBE3B-211ENST00000539843 SSSCA1O60232 199 aa10.91□□□□□ -0.66
UBE3B-211ENST00000539843 LINC00869P0C866 280 aa10.91□□□□□ -0.66
UBE3B-211ENST00000539843 GATA2P23769 480 aaPredicted RBP10.91□□□□□ -0.66
UBE3B-211ENST00000539843 CNN1P51911 297 aaKnown RBP10.91□□□□□ -0.66
UBE3B-211ENST00000539843 POLR2GP62487 172 aaKnown RBP eCLIP10.91□□□□□ -0.66
UBE3B-211ENST00000539843 RNF212Q495C1 297 aa10.91□□□□□ -0.66
UBE3B-211ENST00000539843 C4orf46Q504U0 113 aa10.91□□□□□ -0.66
UBE3B-211ENST00000539843 CCDC190Q86UF4 302 aa10.91□□□□□ -0.66
UBE3B-211ENST00000539843 C1orf158Q8N1D5 194 aa10.91□□□□□ -0.66
UBE3B-211ENST00000539843 C15orf53Q8NAA6 179 aa10.91□□□□□ -0.66
UBE3B-211ENST00000539843 SLC25A39Q9BZJ4 359 aaPredicted RBP10.91□□□□□ -0.66
UBE3B-211ENST00000539843 LYRM9A8MSI8 78 aa10.9□□□□□ -0.66
UBE3B-211ENST00000539843 H3BRN7 92 aa10.9□□□□□ -0.66
UBE3B-211ENST00000539843 SCGB1D2O95969 90 aa10.9□□□□□ -0.66
UBE3B-211ENST00000539843 RHOBP62745 196 aa10.9□□□□□ -0.66
UBE3B-211ENST00000539843 ID3Q02535 119 aa10.9□□□□□ -0.66
UBE3B-211ENST00000539843 SPINK13Q1W4C9 94 aa10.9□□□□□ -0.66
UBE3B-211ENST00000539843 OR11H7Q8NGC8 314 aa10.9□□□□□ -0.66
UBE3B-211ENST00000539843 OR10P1Q8NGE3 313 aa10.9□□□□□ -0.66
UBE3B-211ENST00000539843 C20orf173Q96LM9 149 aa10.9□□□□□ -0.66
UBE3B-211ENST00000539843 ATG101Q9BSB4 218 aa10.9□□□□□ -0.66
UBE3B-211ENST00000539843 SHANK2-AS3Q9BTD1 123 aa10.9□□□□□ -0.66
UBE3B-211ENST00000539843 SCRT1Q9BWW7 348 aa10.9□□□□□ -0.66
UBE3B-211ENST00000539843 NPVFQ9HCQ7 196 aa10.9□□□□□ -0.66
UBE3B-211ENST00000539843 DNAH10Q8IVF4 4471 aa10.9□□□□□ -0.66
UBE3B-211ENST00000539843 A8MTW9 85 aa10.89□□□□□ -0.67
UBE3B-211ENST00000539843 ADAP1O75689 374 aa10.89□□□□□ -0.67
UBE3B-211ENST00000539843 NDUFB6O95139 128 aa10.89□□□□□ -0.67
UBE3B-211ENST00000539843 ANXA7P20073 488 aaKnown RBP10.89□□□□□ -0.67
UBE3B-211ENST00000539843 DLK1P80370 383 aa10.89□□□□□ -0.67
UBE3B-211ENST00000539843 HIST1H1AQ02539 215 aaPredicted RBP10.89□□□□□ -0.67
UBE3B-211ENST00000539843 CNPY1Q3B7I2 92 aa10.89□□□□□ -0.67
UBE3B-211ENST00000539843 PXDC1Q5TGL8 231 aa10.89□□□□□ -0.67
UBE3B-211ENST00000539843 TEPPQ6URK8 271 aa10.89□□□□□ -0.67
UBE3B-211ENST00000539843 SMIM8Q96KF7 97 aa10.89□□□□□ -0.67
UBE3B-211ENST00000539843 FNDC10F2Z333 226 aa10.88□□□□□ -0.67
UBE3B-211ENST00000539843 BOLA2-SMG1P6H3BVE0 249 aa10.88□□□□□ -0.67
UBE3B-211ENST00000539843 M0R2Z0 102 aa10.88□□□□□ -0.67
UBE3B-211ENST00000539843 OR4E1P0C645 316 aa10.88□□□□□ -0.67
UBE3B-211ENST00000539843 FAM3BP58499 235 aaPredicted RBP10.88□□□□□ -0.67
UBE3B-211ENST00000539843 RRAS2P62070 204 aaPredicted RBP10.88□□□□□ -0.67
UBE3B-211ENST00000539843 TMEM88Q6PEY1 159 aa10.88□□□□□ -0.67
UBE3B-211ENST00000539843 TMEM256Q8N2U0 113 aa10.88□□□□□ -0.67
UBE3B-211ENST00000539843 RNF182Q8N6D2 247 aa10.88□□□□□ -0.67
UBE3B-211ENST00000539843 SRRQ9GZT4 340 aa10.88□□□□□ -0.67
UBE3B-211ENST00000539843 ARL6Q9H0F7 186 aa10.88□□□□□ -0.67
UBE3B-211ENST00000539843 IGLV2-18A0A075B6J9 118 aa10.87□□□□□ -0.67
UBE3B-211ENST00000539843 ZNF701M0R085 212 aaPredicted RBP10.87□□□□□ -0.67
UBE3B-211ENST00000539843 GOSR2O14653 212 aa10.87□□□□□ -0.67
UBE3B-211ENST00000539843 TSC22D2O75157 780 aa10.87□□□□□ -0.67
UBE3B-211ENST00000539843 TSPOP30536 169 aa10.87□□□□□ -0.67
UBE3B-211ENST00000539843 TAS2R30P59541 319 aa10.87□□□□□ -0.67
UBE3B-211ENST00000539843 PLP1P60201 277 aa10.87□□□□□ -0.67
UBE3B-211ENST00000539843 IAH1Q2TAA2 248 aaPredicted RBP10.87□□□□□ -0.67
UBE3B-211ENST00000539843 AMTNQ6UX39 209 aa10.87□□□□□ -0.67
UBE3B-211ENST00000539843 TMEM182Q6ZP80 229 aaPredicted RBP10.87□□□□□ -0.67
UBE3B-211ENST00000539843 ZNF546Q86UE3 836 aa10.87□□□□□ -0.67
UBE3B-211ENST00000539843 LINC01587Q99440 93 aa10.87□□□□□ -0.67
UBE3B-211ENST00000539843 VPS13DQ5THJ4 4388 aa10.87□□□□□ -0.67
UBE3B-211ENST00000539843 DNAH6Q9C0G6 4158 aa10.87□□□□□ -0.67
UBE3B-211ENST00000539843 A0A087X0K7 114 aa10.86□□□□□ -0.67
UBE3B-211ENST00000539843 ZNF705GA8MUZ8 300 aaPredicted RBP10.86□□□□□ -0.67
UBE3B-211ENST00000539843 L7N2F9 121 aa10.86□□□□□ -0.67
UBE3B-211ENST00000539843 METTL15P1P0C7V9 234 aa10.86□□□□□ -0.67
UBE3B-211ENST00000539843 DEFB130BP0DP73 79 aa10.86□□□□□ -0.67
UBE3B-211ENST00000539843 DEFB130AP0DP74 79 aa10.86□□□□□ -0.67
UBE3B-211ENST00000539843 CXCL2P19875 107 aa10.86□□□□□ -0.67
UBE3B-211ENST00000539843 VAMP2P63027 116 aa10.86□□□□□ -0.67
UBE3B-211ENST00000539843 RAB31Q13636 194 aa10.86□□□□□ -0.67
UBE3B-211ENST00000539843 ZNF846Q147U1 533 aa10.86□□□□□ -0.67
UBE3B-211ENST00000539843 LCN15Q6UWW0 184 aa10.86□□□□□ -0.67
UBE3B-211ENST00000539843 BAP18Q8IXM2 172 aa10.86□□□□□ -0.67
UBE3B-211ENST00000539843 OR8A1Q8NGG7 326 aa10.86□□□□□ -0.67
UBE3B-211ENST00000539843 SLC50A1Q9BRV3 221 aa10.86□□□□□ -0.67
UBE3B-211ENST00000539843 ARV1Q9H2C2 271 aa10.86□□□□□ -0.67
UBE3B-211ENST00000539843 GSKIPQ9P0R6 139 aa10.86□□□□□ -0.67
UBE3B-211ENST00000539843 HECTD4Q9Y4D8 3996 aa10.85□□□□□ -0.67
UBE3B-211ENST00000539843 TRAV8-2A0A0B4J237 113 aa10.85□□□□□ -0.67
UBE3B-211ENST00000539843 LINC00854A0A1B0GVQ3 168 aa10.85□□□□□ -0.67
UBE3B-211ENST00000539843 ATP5G1P05496 136 aa10.85□□□□□ -0.67
UBE3B-211ENST00000539843 MED14OSP0DP75 135 aa10.85□□□□□ -0.67
UBE3B-211ENST00000539843 CXCL3P19876 107 aa10.85□□□□□ -0.67
UBE3B-211ENST00000539843 ATP5G3P48201 142 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms