RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 CXCL2P19875 107 aa9.03□□□□□ -0.96
CHD4-203ENST00000535717 SSTP61278 116 aa9.03□□□□□ -0.96
CHD4-203ENST00000535717 PRR20EP86478 221 aa9.03□□□□□ -0.96
CHD4-203ENST00000535717 PRR20CP86479 221 aa9.03□□□□□ -0.96
CHD4-203ENST00000535717 PRR20DP86480 221 aa9.03□□□□□ -0.96
CHD4-203ENST00000535717 PRR20BP86481 221 aa9.03□□□□□ -0.96
CHD4-203ENST00000535717 PRR20AP86496 221 aa9.03□□□□□ -0.96
CHD4-203ENST00000535717 MIC13Q5XKP0 118 aa9.03□□□□□ -0.96
CHD4-203ENST00000535717 GTSCR1Q86UQ5 136 aa9.03□□□□□ -0.96
CHD4-203ENST00000535717 GBGT1Q8N5D6 347 aa9.03□□□□□ -0.96
CHD4-203ENST00000535717 TCEAL7Q9BRU2 100 aa9.03□□□□□ -0.96
CHD4-203ENST00000535717 ARL6Q9H0F7 186 aa9.03□□□□□ -0.96
CHD4-203ENST00000535717 WFDC1Q9HC57 220 aa9.03□□□□□ -0.96
CHD4-203ENST00000535717 MPDU1O75352 247 aa9.02□□□□□ -0.97
CHD4-203ENST00000535717 OR5G3P0C626 314 aa9.02□□□□□ -0.97
CHD4-203ENST00000535717 RPL29P47914 159 aaKnown RBP9.02□□□□□ -0.97
CHD4-203ENST00000535717 TFPI2P48307 235 aa9.02□□□□□ -0.97
CHD4-203ENST00000535717 CD81P60033 236 aa9.02□□□□□ -0.97
CHD4-203ENST00000535717 RPL11P62913 178 aaKnown RBP9.02□□□□□ -0.97
CHD4-203ENST00000535717 DEFB121Q5J5C9 76 aa9.02□□□□□ -0.97
CHD4-203ENST00000535717 C10orf91Q5T1B1 145 aa9.02□□□□□ -0.97
CHD4-203ENST00000535717 C1orf194Q5T5A4 169 aa9.02□□□□□ -0.97
CHD4-203ENST00000535717 PATE2Q6UY27 113 aa9.02□□□□□ -0.97
CHD4-203ENST00000535717 NPCDR1Q9BY65 106 aa9.02□□□□□ -0.97
CHD4-203ENST00000535717 WDR61Q9GZS3 305 aaKnown RBP9.02□□□□□ -0.97
CHD4-203ENST00000535717 MS4A6AQ9H2W1 248 aa9.02□□□□□ -0.97
CHD4-203ENST00000535717 FBXL17Q9UF56 701 aa9.02□□□□□ -0.97
CHD4-203ENST00000535717 TNFSF18Q9UNG2 199 aa9.02□□□□□ -0.97
CHD4-203ENST00000535717 HIGD1AQ9Y241 93 aa9.02□□□□□ -0.97
CHD4-203ENST00000535717 TGP01266 2768 aa9.01□□□□□ -0.97
CHD4-203ENST00000535717 RNF222A6NCQ9 220 aa9.01□□□□□ -0.97
CHD4-203ENST00000535717 HELTA6NFD8 242 aa9.01□□□□□ -0.97
CHD4-203ENST00000535717 OR4C46A6NHA9 309 aa9.01□□□□□ -0.97
CHD4-203ENST00000535717 ZNF345Q14585 488 aa9.01□□□□□ -0.97
CHD4-203ENST00000535717 SIGLEC15Q6ZMC9 328 aa9.01□□□□□ -0.97
CHD4-203ENST00000535717 INO80EQ8NBZ0 244 aaPredicted RBP9.01□□□□□ -0.97
CHD4-203ENST00000535717 UHRF2Q96PU4 802 aa9.01□□□□□ -0.97
CHD4-203ENST00000535717 SHANK2-AS3Q9BTD1 123 aa9.01□□□□□ -0.97
CHD4-203ENST00000535717 SCRT1Q9BWW7 348 aa9.01□□□□□ -0.97
CHD4-203ENST00000535717 SLC25A39Q9BZJ4 359 aaPredicted RBP9.01□□□□□ -0.97
CHD4-203ENST00000535717 SAV1Q9H4B6 383 aaPredicted RBP9.01□□□□□ -0.97
CHD4-203ENST00000535717 SLC39A9Q9NUM3 307 aa9.01□□□□□ -0.97
CHD4-203ENST00000535717 C19orf73Q9NVV2 129 aa9.01□□□□□ -0.97
CHD4-203ENST00000535717 CARHSP1Q9Y2V2 147 aaKnown RBP9.01□□□□□ -0.97
CHD4-203ENST00000535717 PXMP4Q9Y6I8 212 aa9.01□□□□□ -0.97
CHD4-203ENST00000535717 PCP4L1A6NKN8 68 aa9□□□□□ -0.97
CHD4-203ENST00000535717 H3BRN7 92 aa9□□□□□ -0.97
CHD4-203ENST00000535717 ARPC5O15511 151 aa9□□□□□ -0.97
CHD4-203ENST00000535717 COX7A2P2O60397 106 aa9□□□□□ -0.97
CHD4-203ENST00000535717 IFNA5P01569 189 aa9□□□□□ -0.97
CHD4-203ENST00000535717 PAFAH1B2P68402 229 aa9□□□□□ -0.97
CHD4-203ENST00000535717 LEMD1Q68G75 181 aa9□□□□□ -0.97
CHD4-203ENST00000535717 TMUB2Q71RG4 321 aa9□□□□□ -0.97
CHD4-203ENST00000535717 WFDC3Q8IUB2 231 aa9□□□□□ -0.97
CHD4-203ENST00000535717 OR8I2Q8N0Y5 310 aa9□□□□□ -0.97
CHD4-203ENST00000535717 SVBPQ8N300 66 aa9□□□□□ -0.97
CHD4-203ENST00000535717 STXBP6Q8NFX7 210 aa9□□□□□ -0.97
CHD4-203ENST00000535717 TMEM37Q8WXS4 190 aa9□□□□□ -0.97
CHD4-203ENST00000535717 WFDC10AQ9H1F0 79 aa9□□□□□ -0.97
CHD4-203ENST00000535717 ARV1Q9H2C2 271 aa9□□□□□ -0.97
CHD4-203ENST00000535717 SLC25A22Q9H936 323 aa9□□□□□ -0.97
CHD4-203ENST00000535717 SMAD5-AS1Q9Y6J3 95 aa9□□□□□ -0.97
CHD4-203ENST00000535717 COL7A1Q02388 2944 aa8.99□□□□□ -0.97
CHD4-203ENST00000535717 ELOA3CA0A087WX78 387 aaPredicted RBP8.99□□□□□ -0.97
CHD4-203ENST00000535717 TRAV2A0A0B4J234 112 aa8.99□□□□□ -0.97
CHD4-203ENST00000535717 OR11H12B2RN74 326 aa8.99□□□□□ -0.97
CHD4-203ENST00000535717 K7EQG2 157 aa8.99□□□□□ -0.97
CHD4-203ENST00000535717 IGHV4-30-4P0DP06 118 aa8.99□□□□□ -0.97
CHD4-203ENST00000535717 S100A7P31151 101 aa8.99□□□□□ -0.97
CHD4-203ENST00000535717 ODF3L2Q3SX64 289 aa8.99□□□□□ -0.97
CHD4-203ENST00000535717 C10orf113Q5VZT2 155 aa8.99□□□□□ -0.97
CHD4-203ENST00000535717 Q6ZRG5 221 aa8.99□□□□□ -0.97
CHD4-203ENST00000535717 FAM24BQ8N5W8 94 aa8.99□□□□□ -0.97
CHD4-203ENST00000535717 DEFB125Q8N687 156 aa8.99□□□□□ -0.97
CHD4-203ENST00000535717 ZNF709Q8N972 641 aa8.99□□□□□ -0.97
CHD4-203ENST00000535717 SCGB1C1Q8TD33 95 aa8.99□□□□□ -0.97
CHD4-203ENST00000535717 DCANP1Q8TF63 244 aa8.99□□□□□ -0.97
CHD4-203ENST00000535717 RSG1Q9BU20 258 aa8.99□□□□□ -0.97
CHD4-203ENST00000535717 PARD6GQ9BYG4 376 aaPredicted RBP8.99□□□□□ -0.97
CHD4-203ENST00000535717 MFFQ9GZY8 342 aa8.99□□□□□ -0.97
CHD4-203ENST00000535717 DNAJC4Q9NNZ3 241 aa8.99□□□□□ -0.97
CHD4-203ENST00000535717 A0A0D9SG52 128 aa8.98□□□□□ -0.97
CHD4-203ENST00000535717 GCSAMLQ5JQS6 135 aa8.98□□□□□ -0.97
CHD4-203ENST00000535717 MORN5Q5VZ52 161 aa8.98□□□□□ -0.97
CHD4-203ENST00000535717 LINC00305Q7Z4B0 112 aa8.98□□□□□ -0.97
CHD4-203ENST00000535717 S100A7AQ86SG5 101 aa8.98□□□□□ -0.97
CHD4-203ENST00000535717 OR1L4Q8NGR5 311 aa8.98□□□□□ -0.97
CHD4-203ENST00000535717 NRN1Q9NPD7 142 aa8.98□□□□□ -0.97
CHD4-203ENST00000535717 RFNGQ9Y644 331 aa8.98□□□□□ -0.97
CHD4-203ENST00000535717 FAM74A7A6NL05 159 aa8.97□□□□□ -0.97
CHD4-203ENST00000535717 A8MZ25 164 aa8.97□□□□□ -0.97
CHD4-203ENST00000535717 C17orf112F2Z3M2 114 aa8.97□□□□□ -0.97
CHD4-203ENST00000535717 FRMD6-AS1P0C7T7 363 aa8.97□□□□□ -0.97
CHD4-203ENST00000535717 FAM74A3Q4VXF1 159 aa8.97□□□□□ -0.97
CHD4-203ENST00000535717 ATRAIDQ6UW56 229 aa8.97□□□□□ -0.97
CHD4-203ENST00000535717 SFT2D1Q8WV19 159 aa8.97□□□□□ -0.97
CHD4-203ENST00000535717 C17orf77Q96MU5 243 aa8.97□□□□□ -0.97
CHD4-203ENST00000535717 GPR82Q96P67 336 aa8.97□□□□□ -0.97
CHD4-203ENST00000535717 PFDN5Q99471 154 aa8.97□□□□□ -0.97
CHD4-203ENST00000535717 FAM110AQ9BQ89 295 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms