RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 F5H768 121 aa10.35□□□□□ -0.75
SPG11-203ENST00000535302 LGALS1P09382 135 aaKnown RBP10.35□□□□□ -0.75
SPG11-203ENST00000535302 IGHV1-8P0DP01 117 aa10.35□□□□□ -0.75
SPG11-203ENST00000535302 DEFB105AQ8NG35 78 aa10.35□□□□□ -0.75
SPG11-203ENST00000535302 IGHV1-3A0A0C4DH29 117 aa10.34□□□□□ -0.75
SPG11-203ENST00000535302 PVRIGQ6DKI7 326 aa10.34□□□□□ -0.75
SPG11-203ENST00000535302 WNK3Q9BYP7 1800 aa10.34□□□□□ -0.75
SPG11-203ENST00000535302 IL18BPO95998 194 aa10.34□□□□□ -0.75
SPG11-203ENST00000535302 ZFAND6Q6FIF0 208 aa10.34□□□□□ -0.75
SPG11-203ENST00000535302 MLANAQ16655 118 aa10.34□□□□□ -0.75
SPG11-203ENST00000535302 TEX43Q6ZNM6 134 aa10.34□□□□□ -0.75
SPG11-203ENST00000535302 LINC00271P0C7V0 271 aa10.34□□□□□ -0.75
SPG11-203ENST00000535302 PSG1P11464 419 aa10.34□□□□□ -0.75
SPG11-203ENST00000535302 TNFRSF14Q92956 283 aa10.34□□□□□ -0.75
SPG11-203ENST00000535302 CARHSP1Q9Y2V2 147 aaKnown RBP10.34□□□□□ -0.75
SPG11-203ENST00000535302 J3QRE1 110 aa10.34□□□□□ -0.75
SPG11-203ENST00000535302 SH2D1AO60880 128 aa10.34□□□□□ -0.75
SPG11-203ENST00000535302 CRIPAKQ8N1N5 446 aa10.34□□□□□ -0.75
SPG11-203ENST00000535302 GGTLC1Q9BX51 225 aa10.34□□□□□ -0.75
SPG11-203ENST00000535302 KLK9Q9UKQ9 250 aa10.34□□□□□ -0.75
SPG11-203ENST00000535302 A0A1W2PRE2 83 aa10.33□□□□□ -0.75
SPG11-203ENST00000535302 BCL6BQ8N143 479 aaPredicted RBP10.33□□□□□ -0.75
SPG11-203ENST00000535302 XCL2Q9UBD3 114 aa10.33□□□□□ -0.75
SPG11-203ENST00000535302 NXPH4O95158 308 aa10.33□□□□□ -0.76
SPG11-203ENST00000535302 MORN3Q6PF18 240 aaPredicted RBP10.33□□□□□ -0.76
SPG11-203ENST00000535302 LOC285556D6RIA3 1793 aa10.33□□□□□ -0.76
SPG11-203ENST00000535302 GUSBP1Q15486 140 aa10.33□□□□□ -0.76
SPG11-203ENST00000535302 LCTP09848 1927 aa10.33□□□□□ -0.76
SPG11-203ENST00000535302 TCF20Q9UGU0 1960 aaKnown RBP10.33□□□□□ -0.76
SPG11-203ENST00000535302 TMEM178BH3BS89 294 aa10.33□□□□□ -0.76
SPG11-203ENST00000535302 SYNJ2BPP57105 145 aa10.33□□□□□ -0.76
SPG11-203ENST00000535302 DOCK8Q8NF50 2099 aa10.33□□□□□ -0.76
SPG11-203ENST00000535302 CXCL1P09341 107 aa10.33□□□□□ -0.76
SPG11-203ENST00000535302 TREML4Q6UXN2 200 aa10.33□□□□□ -0.76
SPG11-203ENST00000535302 SLC50A1Q9BRV3 221 aa10.33□□□□□ -0.76
SPG11-203ENST00000535302 TMEM126AQ9H061 195 aa10.33□□□□□ -0.76
SPG11-203ENST00000535302 IGLV3-32A0A0A0MS00 114 aa10.32□□□□□ -0.76
SPG11-203ENST00000535302 MBD3L4A6NDZ8 208 aaPredicted RBP10.32□□□□□ -0.76
SPG11-203ENST00000535302 MBD3L3A6NE82 208 aaPredicted RBP10.32□□□□□ -0.76
SPG11-203ENST00000535302 MBD3L5A6NJ08 208 aaPredicted RBP10.32□□□□□ -0.76
SPG11-203ENST00000535302 MBD3L2Q8NHZ7 208 aaPredicted RBP10.32□□□□□ -0.76
SPG11-203ENST00000535302 PLSCR4Q9NRQ2 329 aa10.32□□□□□ -0.76
SPG11-203ENST00000535302 WDR90Q96KV7 1748 aa10.32□□□□□ -0.76
SPG11-203ENST00000535302 GAGE2BQ13066 116 aa10.32□□□□□ -0.76
SPG11-203ENST00000535302 PTPRDP23468 1912 aa10.32□□□□□ -0.76
SPG11-203ENST00000535302 ORMDL2Q53FV1 153 aa10.32□□□□□ -0.76
SPG11-203ENST00000535302 TPTE2P1Q5T6R2 138 aa10.32□□□□□ -0.76
SPG11-203ENST00000535302 ANK1P16157 1881 aa10.32□□□□□ -0.76
SPG11-203ENST00000535302 RNASE13Q5GAN3 156 aaKnown RBP10.32□□□□□ -0.76
SPG11-203ENST00000535302 UNQ6494/PRO21346Q6UXR6 183 aa10.32□□□□□ -0.76
SPG11-203ENST00000535302 GAGE12JA6NER3 117 aa10.32□□□□□ -0.76
SPG11-203ENST00000535302 GAGE1Q13065 139 aa10.32□□□□□ -0.76
SPG11-203ENST00000535302 GAGE4Q13068 117 aa10.32□□□□□ -0.76
SPG11-203ENST00000535302 GAGE5Q13069 117 aa10.32□□□□□ -0.76
SPG11-203ENST00000535302 FAM186AA6NE01 2351 aa10.32□□□□□ -0.76
SPG11-203ENST00000535302 IGHV4-4A0A075B6R2 117 aa10.32□□□□□ -0.76
SPG11-203ENST00000535302 TRAV9-2A0A087WT02 112 aa10.32□□□□□ -0.76
SPG11-203ENST00000535302 RNF223E7ERA6 249 aa10.32□□□□□ -0.76
SPG11-203ENST00000535302 CACNA1GO43497 2377 aa10.32□□□□□ -0.76
SPG11-203ENST00000535302 XIRP1Q702N8 1843 aaKnown RBP10.31□□□□□ -0.76
SPG11-203ENST00000535302 RPL36AP83881 106 aaKnown RBP10.31□□□□□ -0.76
SPG11-203ENST00000535302 TMEM158Q8WZ71 300 aa10.31□□□□□ -0.76
SPG11-203ENST00000535302 RPL36ALQ969Q0 106 aaKnown RBP10.31□□□□□ -0.76
SPG11-203ENST00000535302 EFNA4P52798 201 aa10.31□□□□□ -0.76
SPG11-203ENST00000535302 LEPROTO15243 131 aa10.31□□□□□ -0.76
SPG11-203ENST00000535302 C9JAW5 83 aa10.31□□□□□ -0.76
SPG11-203ENST00000535302 MAJINQ3KP22 176 aa10.31□□□□□ -0.76
SPG11-203ENST00000535302 TMEM170AQ8WVE7 144 aa10.31□□□□□ -0.76
SPG11-203ENST00000535302 GAFA1Q96PS6 74 aa10.31□□□□□ -0.76
SPG11-203ENST00000535302 MGST2Q99735 147 aa10.31□□□□□ -0.76
SPG11-203ENST00000535302 PSG3Q16557 428 aa10.31□□□□□ -0.76
SPG11-203ENST00000535302 PRSS57Q6UWY2 283 aa10.31□□□□□ -0.76
SPG11-203ENST00000535302 PRIMA1Q86XR5 153 aa10.31□□□□□ -0.76
SPG11-203ENST00000535302 SNHG12Q9BXW3 62 aa10.31□□□□□ -0.76
SPG11-203ENST00000535302 RALGAPA2Q2PPJ7 1873 aa10.31□□□□□ -0.76
SPG11-203ENST00000535302 LTBP1Q14766 1721 aa10.31□□□□□ -0.76
SPG11-203ENST00000535302 RPRMLQ8N4K4 120 aa10.31□□□□□ -0.76
SPG11-203ENST00000535302 IGLV2-23P01705 113 aa10.3□□□□□ -0.76
SPG11-203ENST00000535302 TRAV12-2A0A075B6T6 113 aa10.3□□□□□ -0.76
SPG11-203ENST00000535302 LINC00473A8K010 186 aa10.3□□□□□ -0.76
SPG11-203ENST00000535302 Q6AWC8 147 aa10.3□□□□□ -0.76
SPG11-203ENST00000535302 SPTBN1Q01082 2364 aaKnown RBP10.3□□□□□ -0.76
SPG11-203ENST00000535302 CEACAM8P31997 349 aaPredicted RBP10.3□□□□□ -0.76
SPG11-203ENST00000535302 SPSB3Q6PJ21 355 aa10.3□□□□□ -0.76
SPG11-203ENST00000535302 BPESC1Q9GZL8 116 aa10.3□□□□□ -0.76
SPG11-203ENST00000535302 NCOR1O75376 2440 aa10.3□□□□□ -0.76
SPG11-203ENST00000535302 FAM166AQ6J272 317 aa10.3□□□□□ -0.76
SPG11-203ENST00000535302 ATP6V0BQ99437 205 aa10.3□□□□□ -0.76
SPG11-203ENST00000535302 GREB1LQ9C091 1923 aaPredicted RBP10.29□□□□□ -0.76
SPG11-203ENST00000535302 ZNF407Q9C0G0 2248 aa10.29□□□□□ -0.76
SPG11-203ENST00000535302 DEFB131AP59861 70 aa10.29□□□□□ -0.76
SPG11-203ENST00000535302 TCF15Q12870 199 aa10.29□□□□□ -0.76
SPG11-203ENST00000535302 SPINK13Q1W4C9 94 aa10.29□□□□□ -0.76
SPG11-203ENST00000535302 THAP8Q8NA92 274 aa10.29□□□□□ -0.76
SPG11-203ENST00000535302 C8orf49Q96NF6 230 aa10.29□□□□□ -0.76
SPG11-203ENST00000535302 TRIOBPQ9H2D6 2365 aa10.29□□□□□ -0.76
SPG11-203ENST00000535302 A0A0G2JMZ2 1700 aa10.29□□□□□ -0.76
SPG11-203ENST00000535302 LRRC37A2A6NM11 1700 aa10.29□□□□□ -0.76
SPG11-203ENST00000535302 LINC00479Q96M42 142 aa10.29□□□□□ -0.76
SPG11-203ENST00000535302 PNRC2Q9NPJ4 139 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms