RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 PRR20DP86480 221 aa9.12□□□□□ -0.95
USF1-211ENST00000534633 PRR20BP86481 221 aa9.12□□□□□ -0.95
USF1-211ENST00000534633 PRR20AP86496 221 aa9.12□□□□□ -0.95
USF1-211ENST00000534633 TMEM41BQ5BJD5 291 aa9.12□□□□□ -0.95
USF1-211ENST00000534633 STX12Q86Y82 276 aa9.12□□□□□ -0.95
USF1-211ENST00000534633 FAM24BQ8N5W8 94 aa9.12□□□□□ -0.95
USF1-211ENST00000534633 OR5C1Q8NGR4 320 aa9.12□□□□□ -0.95
USF1-211ENST00000534633 C17orf77Q96MU5 243 aa9.12□□□□□ -0.95
USF1-211ENST00000534633 UQCC1Q9NVA1 299 aa9.12□□□□□ -0.95
USF1-211ENST00000534633 RABAC1Q9UI14 185 aa9.12□□□□□ -0.95
USF1-211ENST00000534633 DNAH6Q9C0G6 4158 aa9.12□□□□□ -0.95
USF1-211ENST00000534633 IGLL5B9A064 214 aa9.11□□□□□ -0.95
USF1-211ENST00000534633 CFDP00746 253 aaPredicted RBP9.11□□□□□ -0.95
USF1-211ENST00000534633 FABP1P07148 127 aa9.11□□□□□ -0.95
USF1-211ENST00000534633 GIPP09681 153 aaPredicted RBP9.11□□□□□ -0.95
USF1-211ENST00000534633 SPP1P10451 314 aa9.11□□□□□ -0.95
USF1-211ENST00000534633 ORM2P19652 201 aa9.11□□□□□ -0.95
USF1-211ENST00000534633 ATP6V1FQ16864 119 aa9.11□□□□□ -0.95
USF1-211ENST00000534633 MORN3Q6PF18 240 aaPredicted RBP9.11□□□□□ -0.95
USF1-211ENST00000534633 TRPT1Q86TN4 253 aaKnown RBP9.11□□□□□ -0.95
USF1-211ENST00000534633 BPIFCQ8NFQ6 507 aa9.11□□□□□ -0.95
USF1-211ENST00000534633 DCANP1Q8TF63 244 aa9.11□□□□□ -0.95
USF1-211ENST00000534633 GRAMD2BQ96HH9 432 aa9.11□□□□□ -0.95
USF1-211ENST00000534633 TMEM147Q9BVK8 224 aa9.11□□□□□ -0.95
USF1-211ENST00000534633 SLC25A31Q9H0C2 315 aa9.11□□□□□ -0.95
USF1-211ENST00000534633 WFDC1Q9HC57 220 aa9.11□□□□□ -0.95
USF1-211ENST00000534633 APLNQ9ULZ1 77 aa9.11□□□□□ -0.95
USF1-211ENST00000534633 DNAH10Q8IVF4 4471 aa9.1□□□□□ -0.95
USF1-211ENST00000534633 K7EQG2 157 aa9.1□□□□□ -0.95
USF1-211ENST00000534633 MIFP14174 115 aa9.1□□□□□ -0.95
USF1-211ENST00000534633 RPL12P30050 165 aaKnown RBP9.1□□□□□ -0.95
USF1-211ENST00000534633 SELENOTP62341 195 aa9.1□□□□□ -0.95
USF1-211ENST00000534633 HBG1P69891 147 aa9.1□□□□□ -0.95
USF1-211ENST00000534633 HBG2P69892 147 aa9.1□□□□□ -0.95
USF1-211ENST00000534633 BAXQ07812 192 aa9.1□□□□□ -0.95
USF1-211ENST00000534633 MIC13Q5XKP0 118 aa9.1□□□□□ -0.95
USF1-211ENST00000534633 Q6ZNX1 250 aa9.1□□□□□ -0.95
USF1-211ENST00000534633 STXBP6Q8NFX7 210 aa9.1□□□□□ -0.95
USF1-211ENST00000534633 OR1B1Q8NGR6 318 aa9.1□□□□□ -0.95
USF1-211ENST00000534633 TMEM37Q8WXS4 190 aa9.1□□□□□ -0.95
USF1-211ENST00000534633 DOK5Q9P104 306 aa9.1□□□□□ -0.95
USF1-211ENST00000534633 HSPB11Q9Y547 144 aa9.1□□□□□ -0.95
USF1-211ENST00000534633 IGHV4-28A0A0C4DH34 117 aa9.09□□□□□ -0.95
USF1-211ENST00000534633 UBE2L5PA0A1B0GUS4 154 aa9.09□□□□□ -0.95
USF1-211ENST00000534633 ZNF98A6NK75 572 aa9.09□□□□□ -0.95
USF1-211ENST00000534633 ZNF705EA8MWA4 302 aaPredicted RBP9.09□□□□□ -0.95
USF1-211ENST00000534633 GIG44P09565 113 aaPredicted RBP9.09□□□□□ -0.95
USF1-211ENST00000534633 PET100P0DJ07 73 aa9.09□□□□□ -0.95
USF1-211ENST00000534633 RBMY1A1P0DJD3 496 aaKnown RBP9.09□□□□□ -0.95
USF1-211ENST00000534633 RBMY1CP0DJD4 496 aa9.09□□□□□ -0.95
USF1-211ENST00000534633 CAMLGP49069 296 aa9.09□□□□□ -0.95
USF1-211ENST00000534633 RAP2BP61225 183 aa9.09□□□□□ -0.95
USF1-211ENST00000534633 CLINT1Q14677 625 aa9.09□□□□□ -0.95
USF1-211ENST00000534633 RBMY1FQ15415 496 aaKnown RBP9.09□□□□□ -0.95
USF1-211ENST00000534633 THAP6Q8TBB0 222 aa9.09□□□□□ -0.95
USF1-211ENST00000534633 ASB13Q8WXK3 278 aa9.09□□□□□ -0.95
USF1-211ENST00000534633 NARS2Q96I59 477 aaKnown RBP9.09□□□□□ -0.95
USF1-211ENST00000534633 UHRF2Q96PU4 802 aa9.09□□□□□ -0.95
USF1-211ENST00000534633 VPS13DQ5THJ4 4388 aa9.08□□□□□ -0.96
USF1-211ENST00000534633 SMLR1H3BR10 107 aa9.08□□□□□ -0.96
USF1-211ENST00000534633 HYPMO75409 117 aa9.08□□□□□ -0.96
USF1-211ENST00000534633 ZNF688P0C7X2 276 aa9.08□□□□□ -0.96
USF1-211ENST00000534633 FGF7P21781 194 aa9.08□□□□□ -0.96
USF1-211ENST00000534633 HLA-DMBP28068 263 aa9.08□□□□□ -0.96
USF1-211ENST00000534633 RPL29P47914 159 aaKnown RBP9.08□□□□□ -0.96
USF1-211ENST00000534633 OPCMLQ14982 345 aa9.08□□□□□ -0.96
USF1-211ENST00000534633 C1orf194Q5T5A4 169 aa9.08□□□□□ -0.96
USF1-211ENST00000534633 MORN5Q5VZ52 161 aa9.08□□□□□ -0.96
USF1-211ENST00000534633 SIGLEC15Q6ZMC9 328 aa9.08□□□□□ -0.96
USF1-211ENST00000534633 ZNF546Q86UE3 836 aa9.08□□□□□ -0.96
USF1-211ENST00000534633 OR2T35Q8NGX2 323 aa9.08□□□□□ -0.96
USF1-211ENST00000534633 SLC25A39Q9BZJ4 359 aaPredicted RBP9.08□□□□□ -0.96
USF1-211ENST00000534633 SMIM3Q9BZL3 60 aa9.08□□□□□ -0.96
USF1-211ENST00000534633 WDR61Q9GZS3 305 aaKnown RBP9.08□□□□□ -0.96
USF1-211ENST00000534633 ARL6Q9H0F7 186 aa9.08□□□□□ -0.96
USF1-211ENST00000534633 TRAV10A0A0B4J240 114 aa9.07□□□□□ -0.96
USF1-211ENST00000534633 RNF222A6NCQ9 220 aa9.07□□□□□ -0.96
USF1-211ENST00000534633 HELTA6NFD8 242 aa9.07□□□□□ -0.96
USF1-211ENST00000534633 H3BRN7 92 aa9.07□□□□□ -0.96
USF1-211ENST00000534633 C4BPBP20851 252 aa9.07□□□□□ -0.96
USF1-211ENST00000534633 Q6ZTC4 211 aa9.07□□□□□ -0.96
USF1-211ENST00000534633 AQP10Q96PS8 301 aa9.07□□□□□ -0.96
USF1-211ENST00000534633 ATP5SQ99766 215 aa9.07□□□□□ -0.96
USF1-211ENST00000534633 SHANK2-AS3Q9BTD1 123 aa9.07□□□□□ -0.96
USF1-211ENST00000534633 SCRT1Q9BWW7 348 aa9.07□□□□□ -0.96
USF1-211ENST00000534633 NPCDR1Q9BY65 106 aa9.07□□□□□ -0.96
USF1-211ENST00000534633 SLC25A32Q9H2D1 315 aa9.07□□□□□ -0.96
USF1-211ENST00000534633 HIGD1AQ9Y241 93 aa9.07□□□□□ -0.96
USF1-211ENST00000534633 RFNGQ9Y644 331 aa9.07□□□□□ -0.96
USF1-211ENST00000534633 X6R8D5 127 aa9.07□□□□□ -0.96
USF1-211ENST00000534633 IGHV4-4A0A075B6R2 117 aa9.06□□□□□ -0.96
USF1-211ENST00000534633 ELOA3CA0A087WX78 387 aaPredicted RBP9.06□□□□□ -0.96
USF1-211ENST00000534633 KNCNA6PVL3 124 aa9.06□□□□□ -0.96
USF1-211ENST00000534633 SOCS3O14543 225 aa9.06□□□□□ -0.96
USF1-211ENST00000534633 MRPS12O15235 138 aaKnown RBP9.06□□□□□ -0.96
USF1-211ENST00000534633 OR5G3P0C626 314 aa9.06□□□□□ -0.96
USF1-211ENST00000534633 AP2S1P53680 142 aaPredicted RBP9.06□□□□□ -0.96
USF1-211ENST00000534633 FGL1Q08830 312 aa9.06□□□□□ -0.96
USF1-211ENST00000534633 GCSAMLQ5JQS6 135 aa9.06□□□□□ -0.96
USF1-211ENST00000534633 ACTL10Q5JWF8 245 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 151.7 ms