RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 MALP21145 153 aa9.15□□□□□ -0.95
PTPRK-221ENST00000532331 MRPL16Q9NX20 251 aaKnown RBP9.15□□□□□ -0.95
PTPRK-221ENST00000532331 HELZP42694 1942 aaKnown RBP9.15□□□□□ -0.95
PTPRK-221ENST00000532331 LINC00473A8K010 186 aa9.14□□□□□ -0.95
PTPRK-221ENST00000532331 SRSF3P84103 164 aaKnown RBP9.14□□□□□ -0.95
PTPRK-221ENST00000532331 TMEM14EPQ6UXP3 125 aa9.14□□□□□ -0.95
PTPRK-221ENST00000532331 RNF144BQ7Z419 303 aa9.14□□□□□ -0.95
PTPRK-221ENST00000532331 SRSF8Q9BRL6 282 aaKnown RBP9.14□□□□□ -0.95
PTPRK-221ENST00000532331 SCRT1Q9BWW7 348 aa9.14□□□□□ -0.95
PTPRK-221ENST00000532331 ADMP35318 185 aa9.14□□□□□ -0.95
PTPRK-221ENST00000532331 CYSLTR1Q9Y271 337 aa9.14□□□□□ -0.95
PTPRK-221ENST00000532331 ORMDL2Q53FV1 153 aa9.14□□□□□ -0.95
PTPRK-221ENST00000532331 C14orf144Q96I85 54 aa9.14□□□□□ -0.95
PTPRK-221ENST00000532331 MGST2Q99735 147 aa9.14□□□□□ -0.95
PTPRK-221ENST00000532331 PRADC1Q9BSG0 188 aa9.14□□□□□ -0.95
PTPRK-221ENST00000532331 PKDREJQ9NTG1 2253 aa9.14□□□□□ -0.95
PTPRK-221ENST00000532331 PGPEP1LA6NFU8 196 aa9.14□□□□□ -0.95
PTPRK-221ENST00000532331 NPIPB5A8MRT5 1133 aa9.14□□□□□ -0.95
PTPRK-221ENST00000532331 SERF1AO75920 110 aa9.14□□□□□ -0.95
PTPRK-221ENST00000532331 CTAG1AP78358 180 aa9.14□□□□□ -0.95
PTPRK-221ENST00000532331 ASCL4Q6XD76 172 aa9.14□□□□□ -0.95
PTPRK-221ENST00000532331 FER1L5A0AVI2 2057 aa9.14□□□□□ -0.95
PTPRK-221ENST00000532331 IGKV2-40A0A087WW87 121 aaPredicted RBP9.14□□□□□ -0.95
PTPRK-221ENST00000532331 IGHV4-61A0A0C4DH41 118 aa9.14□□□□□ -0.95
PTPRK-221ENST00000532331 IGKV2D-40P01614 121 aaPredicted RBP9.14□□□□□ -0.95
PTPRK-221ENST00000532331 HBDP02042 147 aa9.14□□□□□ -0.95
PTPRK-221ENST00000532331 DEFB112Q30KQ8 113 aa9.14□□□□□ -0.95
PTPRK-221ENST00000532331 JKAMPQ9P055 326 aa9.14□□□□□ -0.95
PTPRK-221ENST00000532331 IGHV4-39P01824 125 aa9.13□□□□□ -0.95
PTPRK-221ENST00000532331 FOXL1Q12952 345 aa9.13□□□□□ -0.95
PTPRK-221ENST00000532331 SPATA31B1PQ5VZV4 182 aa9.13□□□□□ -0.95
PTPRK-221ENST00000532331 C9orf139Q6ZV77 190 aa9.13□□□□□ -0.95
PTPRK-221ENST00000532331 PARD6GQ9BYG4 376 aaPredicted RBP9.13□□□□□ -0.95
PTPRK-221ENST00000532331 ITGB1BP1O14713 200 aa9.13□□□□□ -0.95
PTPRK-221ENST00000532331 ATRAIDQ6UW56 229 aa9.13□□□□□ -0.95
PTPRK-221ENST00000532331 VOPP1Q96AW1 172 aa9.13□□□□□ -0.95
PTPRK-221ENST00000532331 GNB1LQ9BYB4 327 aa9.13□□□□□ -0.95
PTPRK-221ENST00000532331 ATP5L2Q7Z4Y8 100 aa9.13□□□□□ -0.95
PTPRK-221ENST00000532331 NRN1Q9NPD7 142 aa9.13□□□□□ -0.95
PTPRK-221ENST00000532331 VPREB3Q9UKI3 123 aa9.13□□□□□ -0.95
PTPRK-221ENST00000532331 TRAV1-1A0A0B4J248 108 aa9.13□□□□□ -0.95
PTPRK-221ENST00000532331 INSP01308 110 aa9.12□□□□□ -0.95
PTPRK-221ENST00000532331 LINC00614P0C842 121 aa9.12□□□□□ -0.95
PTPRK-221ENST00000532331 C5orf24Q7Z6I8 188 aa9.12□□□□□ -0.95
PTPRK-221ENST00000532331 UBE2E2Q96LR5 201 aa9.12□□□□□ -0.95
PTPRK-221ENST00000532331 ZMAT4Q9H898 229 aa9.12□□□□□ -0.95
PTPRK-221ENST00000532331 SEPSECSQ9HD40 501 aaKnown RBP9.12□□□□□ -0.95
PTPRK-221ENST00000532331 SNAI2O43623 268 aa9.12□□□□□ -0.95
PTPRK-221ENST00000532331 FCN3O75636 299 aa9.12□□□□□ -0.95
PTPRK-221ENST00000532331 NTF4P34130 210 aa9.12□□□□□ -0.95
PTPRK-221ENST00000532331 EXOC3-AS1Q8N2X6 119 aa9.12□□□□□ -0.95
PTPRK-221ENST00000532331 NUDT10Q8NFP7 164 aa9.12□□□□□ -0.95
PTPRK-221ENST00000532331 NUDT11Q96G61 164 aa9.12□□□□□ -0.95
PTPRK-221ENST00000532331 COL4A4P53420 1690 aaPredicted RBP9.12□□□□□ -0.95
PTPRK-221ENST00000532331 FHL1Q13642 323 aa9.12□□□□□ -0.95
PTPRK-221ENST00000532331 NCOR1P1Q9H4R4 102 aa9.12□□□□□ -0.95
PTPRK-221ENST00000532331 RBMY1BA6NDE4 496 aaKnown RBP9.12□□□□□ -0.95
PTPRK-221ENST00000532331 RBMY1EA6NEQ0 496 aaKnown RBP9.12□□□□□ -0.95
PTPRK-221ENST00000532331 RBMY1DP0C7P1 496 aaKnown RBP9.12□□□□□ -0.95
PTPRK-221ENST00000532331 RBMY1A1P0DJD3 496 aaKnown RBP9.12□□□□□ -0.95
PTPRK-221ENST00000532331 RBMY1CP0DJD4 496 aa9.12□□□□□ -0.95
PTPRK-221ENST00000532331 LMO1P25800 156 aa9.12□□□□□ -0.95
PTPRK-221ENST00000532331 DUX4L9Q6RFH8 374 aaPredicted RBP9.12□□□□□ -0.95
PTPRK-221ENST00000532331 ZNF843Q8N446 348 aa9.12□□□□□ -0.95
PTPRK-221ENST00000532331 Q8NA96 180 aa9.12□□□□□ -0.95
PTPRK-221ENST00000532331 A0A1B0GUS0 222 aa9.12□□□□□ -0.95
PTPRK-221ENST00000532331 IGHV2-70P01814 119 aa9.12□□□□□ -0.95
PTPRK-221ENST00000532331 FXYD7P58549 80 aa9.12□□□□□ -0.95
PTPRK-221ENST00000532331 C10orf105Q8TEF2 133 aa9.12□□□□□ -0.95
PTPRK-221ENST00000532331 RCHY1Q96PM5 261 aa9.12□□□□□ -0.95
PTPRK-221ENST00000532331 CYTL1Q9NRR1 136 aa9.12□□□□□ -0.95
PTPRK-221ENST00000532331 ZNRD1Q9P1U0 126 aa9.12□□□□□ -0.95
PTPRK-221ENST00000532331 C1QL4Q86Z23 238 aa9.11□□□□□ -0.95
PTPRK-221ENST00000532331 ST6GALNAC6Q969X2 333 aa9.11□□□□□ -0.95
PTPRK-221ENST00000532331 ZNF581Q9P0T4 197 aa9.11□□□□□ -0.95
PTPRK-221ENST00000532331 PSCAO43653 123 aa9.11□□□□□ -0.95
PTPRK-221ENST00000532331 ZNF138P52744 262 aa9.11□□□□□ -0.95
PTPRK-221ENST00000532331 KAAG1Q9UBP8 84 aa9.11□□□□□ -0.95
PTPRK-221ENST00000532331 FAM208BQ5VWN6 2430 aa9.11□□□□□ -0.95
PTPRK-221ENST00000532331 TRBV7-9A0A0J9YWB2 115 aa9.11□□□□□ -0.95
PTPRK-221ENST00000532331 TCRAP04437 139 aa9.11□□□□□ -0.95
PTPRK-221ENST00000532331 AGMATQ9BSE5 352 aa9.11□□□□□ -0.95
PTPRK-221ENST00000532331 PLXND1Q9Y4D7 1925 aa9.11□□□□□ -0.95
PTPRK-221ENST00000532331 DOCK7Q96N67 2140 aa9.11□□□□□ -0.95
PTPRK-221ENST00000532331 DOCK9Q9BZ29 2069 aa9.11□□□□□ -0.95
PTPRK-221ENST00000532331 LINC01549A6NIU2 74 aa9.11□□□□□ -0.95
PTPRK-221ENST00000532331 CD28P10747 220 aa9.11□□□□□ -0.95
PTPRK-221ENST00000532331 TSSC4Q9Y5U2 329 aaPredicted RBP9.11□□□□□ -0.95
PTPRK-221ENST00000532331 TRGV1A0A0A0MS02 117 aa9.1□□□□□ -0.95
PTPRK-221ENST00000532331 IGKV3D-20A0A0C4DH25 116 aa9.1□□□□□ -0.95
PTPRK-221ENST00000532331 IGKV1-16P04430 117 aa9.1□□□□□ -0.95
PTPRK-221ENST00000532331 EVI2AP22794 236 aa9.1□□□□□ -0.95
PTPRK-221ENST00000532331 FAM120AOSQ5T036 256 aa9.1□□□□□ -0.95
PTPRK-221ENST00000532331 TMEM158Q8WZ71 300 aa9.1□□□□□ -0.95
PTPRK-221ENST00000532331 LINC00477Q96M19 166 aa9.1□□□□□ -0.95
PTPRK-221ENST00000532331 DPM2O94777 84 aa9.1□□□□□ -0.95
PTPRK-221ENST00000532331 TOMM40O96008 361 aa9.1□□□□□ -0.95
PTPRK-221ENST00000532331 APOC4P55056 127 aa9.1□□□□□ -0.95
PTPRK-221ENST00000532331 DEFB131AP59861 70 aa9.1□□□□□ -0.95
PTPRK-221ENST00000532331 CHCHD5Q9BSY4 110 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms