RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 SCRT1Q9BWW7 348 aa13.75□□□□□ -0.21
GMDS-208ENST00000530927 MFFQ9GZY8 342 aa13.75□□□□□ -0.21
GMDS-208ENST00000530927 SLC25A32Q9H2D1 315 aa13.75□□□□□ -0.21
GMDS-208ENST00000530927 UQCC1Q9NVA1 299 aa13.75□□□□□ -0.21
GMDS-208ENST00000530927 LINC00869P0C866 280 aa13.74□□□□□ -0.21
GMDS-208ENST00000530927 VWC2Q2TAL6 325 aa13.74□□□□□ -0.21
GMDS-208ENST00000530927 UHRF2Q96PU4 802 aa13.74□□□□□ -0.21
GMDS-208ENST00000530927 MGST2Q99735 147 aa13.74□□□□□ -0.21
GMDS-208ENST00000530927 TMEM147Q9BVK8 224 aa13.74□□□□□ -0.21
GMDS-208ENST00000530927 BOLA1Q9Y3E2 137 aa13.74□□□□□ -0.21
GMDS-208ENST00000530927 KIR2DL5BA0A0G2JN68 375 aa13.73□□□□□ -0.21
GMDS-208ENST00000530927 KIR2DL5BA0A0G2JPC4 375 aa13.73□□□□□ -0.21
GMDS-208ENST00000530927 ZNF98A6NK75 572 aa13.73□□□□□ -0.21
GMDS-208ENST00000530927 SPRY2O43597 315 aa13.73□□□□□ -0.21
GMDS-208ENST00000530927 AP2S1P53680 142 aaPredicted RBP13.73□□□□□ -0.21
GMDS-208ENST00000530927 ZNF345Q14585 488 aa13.73□□□□□ -0.21
GMDS-208ENST00000530927 ACTL10Q5JWF8 245 aa13.73□□□□□ -0.21
GMDS-208ENST00000530927 Q6ZWC4 215 aa13.73□□□□□ -0.21
GMDS-208ENST00000530927 OR8I2Q8N0Y5 310 aa13.73□□□□□ -0.21
GMDS-208ENST00000530927 KIR2DL5AQ8N109 375 aa13.73□□□□□ -0.21
GMDS-208ENST00000530927 KIR2DL5BQ8NHK3 375 aa13.73□□□□□ -0.21
GMDS-208ENST00000530927 CSTL1Q9H114 145 aa13.73□□□□□ -0.21
GMDS-208ENST00000530927 SOCS3O14543 225 aa13.73□□□□□ -0.21
GMDS-208ENST00000530927 CLINT1Q14677 625 aa13.73□□□□□ -0.21
GMDS-208ENST00000530927 TEPPQ6URK8 271 aa13.73□□□□□ -0.21
GMDS-208ENST00000530927 STHQ8IWL8 128 aa13.73□□□□□ -0.21
GMDS-208ENST00000530927 ATP5SQ99766 215 aa13.73□□□□□ -0.21
GMDS-208ENST00000530927 SMIM3Q9BZL3 60 aa13.73□□□□□ -0.21
GMDS-208ENST00000530927 A0A0D9SG52 128 aa13.72□□□□□ -0.21
GMDS-208ENST00000530927 AGPAT2O15120 278 aa13.72□□□□□ -0.21
GMDS-208ENST00000530927 CFDP00746 253 aaPredicted RBP13.72□□□□□ -0.21
GMDS-208ENST00000530927 GIG44P09565 113 aaPredicted RBP13.72□□□□□ -0.21
GMDS-208ENST00000530927 CASC10Q5T4H9 136 aa13.72□□□□□ -0.21
GMDS-208ENST00000530927 C1orf194Q5T5A4 169 aa13.72□□□□□ -0.21
GMDS-208ENST00000530927 GDF5OSQ5U4N7 250 aa13.72□□□□□ -0.21
GMDS-208ENST00000530927 PATE2Q6UY27 113 aa13.72□□□□□ -0.21
GMDS-208ENST00000530927 TRPT1Q86TN4 253 aaKnown RBP13.72□□□□□ -0.21
GMDS-208ENST00000530927 SLC7A5P1Q8MH63 180 aa13.72□□□□□ -0.21
GMDS-208ENST00000530927 RNF183Q96D59 192 aa13.72□□□□□ -0.21
GMDS-208ENST00000530927 SLC25A39Q9BZJ4 359 aaPredicted RBP13.72□□□□□ -0.21
GMDS-208ENST00000530927 ARL6Q9H0F7 186 aa13.72□□□□□ -0.21
GMDS-208ENST00000530927 FBXL17Q9UF56 701 aa13.72□□□□□ -0.21
GMDS-208ENST00000530927 SLC45A2Q9UMX9 530 aa13.72□□□□□ -0.21
GMDS-208ENST00000530927 H3BRN7 92 aa13.71□□□□□ -0.22
GMDS-208ENST00000530927 UBE2CO00762 179 aa13.71□□□□□ -0.22
GMDS-208ENST00000530927 CA1P00915 261 aaPredicted RBP13.71□□□□□ -0.22
GMDS-208ENST00000530927 OR5G3P0C626 314 aa13.71□□□□□ -0.22
GMDS-208ENST00000530927 KCNRGQ8N5I3 272 aa13.71□□□□□ -0.22
GMDS-208ENST00000530927 LINC00052Q96N35 136 aa13.71□□□□□ -0.22
GMDS-208ENST00000530927 PFDN2Q9UHV9 154 aa13.71□□□□□ -0.22
GMDS-208ENST00000530927 HIGD1AQ9Y241 93 aa13.71□□□□□ -0.22
GMDS-208ENST00000530927 WDR83OSQ9Y284 106 aa13.71□□□□□ -0.22
GMDS-208ENST00000530927 UBE2L5PA0A1B0GUS4 154 aa13.7□□□□□ -0.22
GMDS-208ENST00000530927 C3orf84H3BNL1 204 aa13.7□□□□□ -0.22
GMDS-208ENST00000530927 TAAR5O14804 337 aa13.7□□□□□ -0.22
GMDS-208ENST00000530927 HYPMO75409 117 aa13.7□□□□□ -0.22
GMDS-208ENST00000530927 CXCL2P19875 107 aa13.7□□□□□ -0.22
GMDS-208ENST00000530927 PLP1P60201 277 aa13.7□□□□□ -0.22
GMDS-208ENST00000530927 RAB31Q13636 194 aa13.7□□□□□ -0.22
GMDS-208ENST00000530927 IGFL4Q6B9Z1 124 aa13.7□□□□□ -0.22
GMDS-208ENST00000530927 C20orf173Q96LM9 149 aa13.7□□□□□ -0.22
GMDS-208ENST00000530927 RSG1Q9BU20 258 aa13.7□□□□□ -0.22
GMDS-208ENST00000530927 WFDC1Q9HC57 220 aa13.7□□□□□ -0.22
GMDS-208ENST00000530927 A0A0J9YWU9 116 aa13.69□□□□□ -0.22
GMDS-208ENST00000530927 MPDU1O75352 247 aa13.69□□□□□ -0.22
GMDS-208ENST00000530927 IFNA5P01569 189 aa13.69□□□□□ -0.22
GMDS-208ENST00000530927 PRB4P10163 310 aaPredicted RBP13.69□□□□□ -0.22
GMDS-208ENST00000530927 SNRPD3P62318 126 aaKnown RBP13.69□□□□□ -0.22
GMDS-208ENST00000530927 ZNF266Q14584 549 aa13.69□□□□□ -0.22
GMDS-208ENST00000530927 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.69□□□□□ -0.22
GMDS-208ENST00000530927 SHANK2-AS3Q9BTD1 123 aa13.69□□□□□ -0.22
GMDS-208ENST00000530927 TP53TG1Q9Y2A0 90 aa13.69□□□□□ -0.22
GMDS-208ENST00000530927 IFNA7P01567 189 aa13.68□□□□□ -0.22
GMDS-208ENST00000530927 SELENOTP62341 195 aa13.68□□□□□ -0.22
GMDS-208ENST00000530927 LGALSLQ3ZCW2 172 aaPredicted RBP13.68□□□□□ -0.22
GMDS-208ENST00000530927 MORN5Q5VZ52 161 aa13.68□□□□□ -0.22
GMDS-208ENST00000530927 MIC13Q5XKP0 118 aa13.68□□□□□ -0.22
GMDS-208ENST00000530927 TEX261Q6UWH6 196 aa13.68□□□□□ -0.22
GMDS-208ENST00000530927 ARPC5LQ9BPX5 153 aa13.68□□□□□ -0.22
GMDS-208ENST00000530927 PARD6GQ9BYG4 376 aaPredicted RBP13.68□□□□□ -0.22
GMDS-208ENST00000530927 WDR61Q9GZS3 305 aaKnown RBP13.68□□□□□ -0.22
GMDS-208ENST00000530927 ARV1Q9H2C2 271 aa13.68□□□□□ -0.22
GMDS-208ENST00000530927 CLEC5AQ9NY25 188 aa13.68□□□□□ -0.22
GMDS-208ENST00000530927 F6UB75 175 aa13.67□□□□□ -0.22
GMDS-208ENST00000530927 IGKV3-20P01619 116 aa13.67□□□□□ -0.22
GMDS-208ENST00000530927 SNRPCP09234 159 aaKnown RBP13.67□□□□□ -0.22
GMDS-208ENST00000530927 FGF7P21781 194 aa13.67□□□□□ -0.22
GMDS-208ENST00000530927 GALR1P47211 349 aa13.67□□□□□ -0.22
GMDS-208ENST00000530927 TMUB2Q71RG4 321 aa13.67□□□□□ -0.22
GMDS-208ENST00000530927 SCGB1C1Q8TD33 95 aa13.67□□□□□ -0.22
GMDS-208ENST00000530927 TMEM37Q8WXS4 190 aa13.67□□□□□ -0.22
GMDS-208ENST00000530927 DYNC2H1Q8NCM8 4307 aaKnown RBP13.66□□□□□ -0.22
GMDS-208ENST00000530927 BORCS7-ASMTA0A0B4J1R7 106 aa13.66□□□□□ -0.22
GMDS-208ENST00000530927 KANTRA0A1W2PQU2 76 aa13.66□□□□□ -0.22
GMDS-208ENST00000530927 CAMLGP49069 296 aa13.66□□□□□ -0.22
GMDS-208ENST00000530927 H3BMM0 161 aa13.65□□□□□ -0.22
GMDS-208ENST00000530927 BCL2L11O43521 198 aa13.65□□□□□ -0.22
GMDS-208ENST00000530927 JTBO76095 146 aa13.65□□□□□ -0.22
GMDS-208ENST00000530927 PSMB3P49720 205 aa13.65□□□□□ -0.22
GMDS-208ENST00000530927 RNF182Q8N6D2 247 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms