RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 TAAR5O14804 337 aa10.47□□□□□ -0.73
USF1-209ENST00000529476 CD81P60033 236 aa10.47□□□□□ -0.73
USF1-209ENST00000529476 PAFAH1B2P68402 229 aa10.47□□□□□ -0.73
USF1-209ENST00000529476 FFAR4Q5NUL3 377 aa10.47□□□□□ -0.73
USF1-209ENST00000529476 GTSCR1Q86UQ5 136 aa10.47□□□□□ -0.73
USF1-209ENST00000529476 PFDN5Q99471 154 aa10.47□□□□□ -0.73
USF1-209ENST00000529476 CYTL1Q9NRR1 136 aa10.47□□□□□ -0.73
USF1-209ENST00000529476 A0A0D9SG52 128 aa10.46□□□□□ -0.73
USF1-209ENST00000529476 ATP6V0CP27449 155 aa10.46□□□□□ -0.73
USF1-209ENST00000529476 S100A7AQ86SG5 101 aa10.46□□□□□ -0.73
USF1-209ENST00000529476 GATAD1Q8WUU5 269 aa10.46□□□□□ -0.73
USF1-209ENST00000529476 ARPC5LQ9BPX5 153 aa10.46□□□□□ -0.73
USF1-209ENST00000529476 SH3BGRL3Q9H299 93 aa10.46□□□□□ -0.73
USF1-209ENST00000529476 NRN1Q9NPD7 142 aa10.46□□□□□ -0.73
USF1-209ENST00000529476 TIMM9Q9Y5J7 89 aa10.46□□□□□ -0.73
USF1-209ENST00000529476 SMAD5-AS1Q9Y6J3 95 aa10.46□□□□□ -0.73
USF1-209ENST00000529476 TRAV5A0A0B4J249 113 aa10.45□□□□□ -0.74
USF1-209ENST00000529476 K7EQG2 157 aa10.45□□□□□ -0.74
USF1-209ENST00000529476 GALR1P47211 349 aa10.45□□□□□ -0.74
USF1-209ENST00000529476 SPATA31B1PQ5VZV4 182 aa10.45□□□□□ -0.74
USF1-209ENST00000529476 TMUB2Q71RG4 321 aa10.45□□□□□ -0.74
USF1-209ENST00000529476 FAM24BQ8N5W8 94 aa10.45□□□□□ -0.74
USF1-209ENST00000529476 DCANP1Q8TF63 244 aa10.45□□□□□ -0.74
USF1-209ENST00000529476 HYLS1Q96M11 299 aa10.45□□□□□ -0.74
USF1-209ENST00000529476 WFDC10AQ9H1F0 79 aa10.45□□□□□ -0.74
USF1-209ENST00000529476 C19orf73Q9NVV2 129 aa10.45□□□□□ -0.74
USF1-209ENST00000529476 UBQLN2Q9UHD9 624 aa10.45□□□□□ -0.74
USF1-209ENST00000529476 TRAV2A0A0B4J234 112 aa10.44□□□□□ -0.74
USF1-209ENST00000529476 BCL2L11O43521 198 aa10.44□□□□□ -0.74
USF1-209ENST00000529476 JTBO76095 146 aa10.44□□□□□ -0.74
USF1-209ENST00000529476 RPL7P18124 248 aaKnown RBP10.44□□□□□ -0.74
USF1-209ENST00000529476 ODF3L2Q3SX64 289 aa10.44□□□□□ -0.74
USF1-209ENST00000529476 LGALSLQ3ZCW2 172 aaPredicted RBP10.44□□□□□ -0.74
USF1-209ENST00000529476 ZFP69Q49AA0 526 aa10.44□□□□□ -0.74
USF1-209ENST00000529476 FAM78BQ5VT40 261 aa10.44□□□□□ -0.74
USF1-209ENST00000529476 MRAPQ8TCY5 172 aa10.44□□□□□ -0.74
USF1-209ENST00000529476 C17orf77Q96MU5 243 aa10.44□□□□□ -0.74
USF1-209ENST00000529476 GPR82Q96P67 336 aa10.44□□□□□ -0.74
USF1-209ENST00000529476 PSMG3Q9BT73 122 aaPredicted RBP10.44□□□□□ -0.74
USF1-209ENST00000529476 SEPSECSQ9HD40 501 aaKnown RBP10.44□□□□□ -0.74
USF1-209ENST00000529476 DNAH3Q8TD57 4116 aa10.43□□□□□ -0.74
USF1-209ENST00000529476 KANTRA0A1W2PQU2 76 aa10.43□□□□□ -0.74
USF1-209ENST00000529476 MRPS12O15235 138 aaKnown RBP10.43□□□□□ -0.74
USF1-209ENST00000529476 PFDN1O60925 122 aa10.43□□□□□ -0.74
USF1-209ENST00000529476 RAB2AP61019 212 aa10.43□□□□□ -0.74
USF1-209ENST00000529476 DEFB121Q5J5C9 76 aa10.43□□□□□ -0.74
USF1-209ENST00000529476 MIR17HGQ75NE6 70 aa10.43□□□□□ -0.74
USF1-209ENST00000529476 DEFB125Q8N687 156 aa10.43□□□□□ -0.74
USF1-209ENST00000529476 OR2G3Q8NGZ4 309 aa10.43□□□□□ -0.74
USF1-209ENST00000529476 GNPNAT1Q96EK6 184 aaPredicted RBP10.43□□□□□ -0.74
USF1-209ENST00000529476 MAP6D1Q9H9H5 199 aa10.43□□□□□ -0.74
USF1-209ENST00000529476 RNF24Q9Y225 148 aa10.43□□□□□ -0.74
USF1-209ENST00000529476 OR11H12B2RN74 326 aa10.42□□□□□ -0.74
USF1-209ENST00000529476 SOCS3O14543 225 aa10.42□□□□□ -0.74
USF1-209ENST00000529476 SNRPCP09234 159 aaKnown RBP10.42□□□□□ -0.74
USF1-209ENST00000529476 ZNF688P0C7X2 276 aa10.42□□□□□ -0.74
USF1-209ENST00000529476 ATF4P18848 351 aaPredicted RBP10.42□□□□□ -0.74
USF1-209ENST00000529476 ACOT6Q3I5F7 207 aaPredicted RBP10.42□□□□□ -0.74
USF1-209ENST00000529476 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.42□□□□□ -0.74
USF1-209ENST00000529476 BPIFA4PQ86YQ2 179 aa10.42□□□□□ -0.74
USF1-209ENST00000529476 ZNF471Q9BX82 626 aaPredicted RBP10.42□□□□□ -0.74
USF1-209ENST00000529476 SLC25A2Q9BXI2 301 aa10.42□□□□□ -0.74
USF1-209ENST00000529476 FUT9Q9Y231 359 aa10.42□□□□□ -0.74
USF1-209ENST00000529476 EIF3GO75821 320 aaKnown RBP eCLIP10.41□□□□□ -0.74
USF1-209ENST00000529476 IGHV4-30-4P0DP06 118 aa10.41□□□□□ -0.74
USF1-209ENST00000529476 M6PRP20645 277 aa10.41□□□□□ -0.74
USF1-209ENST00000529476 DEFB131AP59861 70 aa10.41□□□□□ -0.74
USF1-209ENST00000529476 SERF2P84101 59 aa10.41□□□□□ -0.74
USF1-209ENST00000529476 ZNF124Q15973 351 aa10.41□□□□□ -0.74
USF1-209ENST00000529476 APRG1Q8IVJ8 170 aa10.41□□□□□ -0.74
USF1-209ENST00000529476 C9orf62Q8N4C0 152 aa10.41□□□□□ -0.74
USF1-209ENST00000529476 FAM167A-AS1Q96KT0 104 aa10.41□□□□□ -0.74
USF1-209ENST00000529476 MRPL32Q9BYC8 188 aaKnown RBP10.41□□□□□ -0.74
USF1-209ENST00000529476 A0A087X0K7 114 aa10.4□□□□□ -0.74
USF1-209ENST00000529476 H3BTX0 84 aa10.4□□□□□ -0.74
USF1-209ENST00000529476 CMC4P56277 68 aaPredicted RBP10.4□□□□□ -0.74
USF1-209ENST00000529476 RHOBP62745 196 aa10.4□□□□□ -0.74
USF1-209ENST00000529476 PSMG4Q5JS54 123 aa10.4□□□□□ -0.74
USF1-209ENST00000529476 FAM122CQ6P4D5 195 aa10.4□□□□□ -0.74
USF1-209ENST00000529476 OR10G4Q8NGN3 311 aa10.4□□□□□ -0.74
USF1-209ENST00000529476 OR10G9Q8NGN4 311 aa10.4□□□□□ -0.74
USF1-209ENST00000529476 OR10G7Q8NGN6 311 aa10.4□□□□□ -0.74
USF1-209ENST00000529476 CITED4Q96RK1 184 aa10.4□□□□□ -0.74
USF1-209ENST00000529476 FAM110AQ9BQ89 295 aa10.4□□□□□ -0.74
USF1-209ENST00000529476 SRD5A3Q9H8P0 318 aa10.4□□□□□ -0.74
USF1-209ENST00000529476 H3BQ15 152 aa10.39□□□□□ -0.75
USF1-209ENST00000529476 IGLC2P0DOY2 106 aa10.39□□□□□ -0.75
USF1-209ENST00000529476 PYYP10082 97 aa10.39□□□□□ -0.75
USF1-209ENST00000529476 SPP1P10451 314 aa10.39□□□□□ -0.75
USF1-209ENST00000529476 ID1P41134 155 aa10.39□□□□□ -0.75
USF1-209ENST00000529476 MEOX2P50222 304 aa10.39□□□□□ -0.75
USF1-209ENST00000529476 NKX2-5P52952 324 aaPredicted RBP10.39□□□□□ -0.75
USF1-209ENST00000529476 SNRPD3P62318 126 aaKnown RBP10.39□□□□□ -0.75
USF1-209ENST00000529476 IGFL4Q6B9Z1 124 aa10.39□□□□□ -0.75
USF1-209ENST00000529476 C16orf92Q96LL3 132 aa10.39□□□□□ -0.75
USF1-209ENST00000529476 LINC00052Q96N35 136 aa10.39□□□□□ -0.75
USF1-209ENST00000529476 TUBA4BQ9H853 241 aa10.39□□□□□ -0.75
USF1-209ENST00000529476 TMEM14CQ9P0S9 112 aa10.39□□□□□ -0.75
USF1-209ENST00000529476 TRAV8-2A0A0B4J237 113 aa10.38□□□□□ -0.75
USF1-209ENST00000529476 A0A1W2PPV4 95 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms