RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 C2orf70A6NJV1 201 aa9.23□□□□□ -0.93
TRAF3IP2-211ENST00000528599 OR5G3P0C626 314 aa9.23□□□□□ -0.93
TRAF3IP2-211ENST00000528599 CRYBB3P26998 211 aa9.23□□□□□ -0.93
TRAF3IP2-211ENST00000528599 TMEM41BQ5BJD5 291 aa9.23□□□□□ -0.93
TRAF3IP2-211ENST00000528599 ATRAIDQ6UW56 229 aa9.23□□□□□ -0.93
TRAF3IP2-211ENST00000528599 UHRF2Q96PU4 802 aa9.23□□□□□ -0.93
TRAF3IP2-211ENST00000528599 METTL26Q96S19 204 aa9.23□□□□□ -0.93
TRAF3IP2-211ENST00000528599 EIF5A2Q9GZV4 153 aaKnown RBP9.23□□□□□ -0.93
TRAF3IP2-211ENST00000528599 TMEM231Q9H6L2 316 aa9.23□□□□□ -0.93
TRAF3IP2-211ENST00000528599 VSIRQ9H7M9 311 aa9.23□□□□□ -0.93
TRAF3IP2-211ENST00000528599 DNAJC4Q9NNZ3 241 aa9.23□□□□□ -0.93
TRAF3IP2-211ENST00000528599 RABAC1Q9UI14 185 aa9.23□□□□□ -0.93
TRAF3IP2-211ENST00000528599 U3KQE9 123 aa9.23□□□□□ -0.93
TRAF3IP2-211ENST00000528599 COX7A2P2O60397 106 aa9.23□□□□□ -0.93
TRAF3IP2-211ENST00000528599 CSN3P07498 182 aa9.23□□□□□ -0.93
TRAF3IP2-211ENST00000528599 FOLR2P14207 255 aa9.23□□□□□ -0.93
TRAF3IP2-211ENST00000528599 CBLN1P23435 193 aa9.23□□□□□ -0.93
TRAF3IP2-211ENST00000528599 NPPCP23582 126 aa9.23□□□□□ -0.93
TRAF3IP2-211ENST00000528599 CCL20P78556 96 aa9.23□□□□□ -0.93
TRAF3IP2-211ENST00000528599 GUCA2BQ16661 112 aa9.23□□□□□ -0.93
TRAF3IP2-211ENST00000528599 SFT2D1Q8WV19 159 aa9.23□□□□□ -0.93
TRAF3IP2-211ENST00000528599 SLC35B3Q9H1N7 401 aa9.23□□□□□ -0.93
TRAF3IP2-211ENST00000528599 PEMTQ9UBM1 199 aa9.23□□□□□ -0.93
TRAF3IP2-211ENST00000528599 SMPXQ9UHP9 88 aa9.23□□□□□ -0.93
TRAF3IP2-211ENST00000528599 HIGD1AQ9Y241 93 aa9.23□□□□□ -0.93
TRAF3IP2-211ENST00000528599 ELOA3CA0A087WX78 387 aaPredicted RBP9.22□□□□□ -0.93
TRAF3IP2-211ENST00000528599 IGHV3-66A0A0C4DH42 116 aa9.22□□□□□ -0.93
TRAF3IP2-211ENST00000528599 IGHV7-4-1A0A0J9YVY3 117 aa9.22□□□□□ -0.93
TRAF3IP2-211ENST00000528599 DNASE2O00115 360 aaPredicted RBP9.22□□□□□ -0.93
TRAF3IP2-211ENST00000528599 NDUFS6O75380 124 aaKnown RBP9.22□□□□□ -0.93
TRAF3IP2-211ENST00000528599 C8orf88P0DMB2 117 aa9.22□□□□□ -0.93
TRAF3IP2-211ENST00000528599 ZNF506Q5JVG8 444 aa9.22□□□□□ -0.93
TRAF3IP2-211ENST00000528599 MORN5Q5VZ52 161 aa9.22□□□□□ -0.93
TRAF3IP2-211ENST00000528599 C10orf113Q5VZT2 155 aa9.22□□□□□ -0.93
TRAF3IP2-211ENST00000528599 WFDC9Q8NEX5 89 aa9.22□□□□□ -0.93
TRAF3IP2-211ENST00000528599 OR10G4Q8NGN3 311 aa9.22□□□□□ -0.93
TRAF3IP2-211ENST00000528599 OR1L4Q8NGR5 311 aa9.22□□□□□ -0.93
TRAF3IP2-211ENST00000528599 SLC25A39Q9BZJ4 359 aaPredicted RBP9.22□□□□□ -0.93
TRAF3IP2-211ENST00000528599 SELENOKQ9Y6D0 94 aa9.22□□□□□ -0.93
TRAF3IP2-211ENST00000528599 NOTCH1P46531 2555 aa9.21□□□□□ -0.93
TRAF3IP2-211ENST00000528599 H3BRN7 92 aa9.21□□□□□ -0.93
TRAF3IP2-211ENST00000528599 ACOT6Q3I5F7 207 aaPredicted RBP9.21□□□□□ -0.93
TRAF3IP2-211ENST00000528599 KHDC3LQ587J8 217 aa9.21□□□□□ -0.93
TRAF3IP2-211ENST00000528599 SPATA31B1PQ5VZV4 182 aa9.21□□□□□ -0.93
TRAF3IP2-211ENST00000528599 LINC00305Q7Z4B0 112 aa9.21□□□□□ -0.93
TRAF3IP2-211ENST00000528599 GATAD1Q8WUU5 269 aa9.21□□□□□ -0.93
TRAF3IP2-211ENST00000528599 PFDN5Q99471 154 aa9.21□□□□□ -0.93
TRAF3IP2-211ENST00000528599 SHANK2-AS3Q9BTD1 123 aa9.21□□□□□ -0.93
TRAF3IP2-211ENST00000528599 RHPN1-AS1Q9BWJ2 59 aa9.21□□□□□ -0.93
TRAF3IP2-211ENST00000528599 SEPSECSQ9HD40 501 aaKnown RBP9.21□□□□□ -0.93
TRAF3IP2-211ENST00000528599 ZNF98A6NK75 572 aa9.2□□□□□ -0.94
TRAF3IP2-211ENST00000528599 CHEK1O14757 476 aa9.2□□□□□ -0.94
TRAF3IP2-211ENST00000528599 BUB3O43684 328 aa9.2□□□□□ -0.94
TRAF3IP2-211ENST00000528599 EIF3GO75821 320 aaKnown RBP eCLIP9.2□□□□□ -0.94
TRAF3IP2-211ENST00000528599 LEMD1Q68G75 181 aa9.2□□□□□ -0.94
TRAF3IP2-211ENST00000528599 RPP25LQ8N5L8 163 aaKnown RBP9.2□□□□□ -0.94
TRAF3IP2-211ENST00000528599 CLRN3Q8NCR9 226 aa9.2□□□□□ -0.94
TRAF3IP2-211ENST00000528599 OR10G9Q8NGN4 311 aa9.2□□□□□ -0.94
TRAF3IP2-211ENST00000528599 OR10G7Q8NGN6 311 aa9.2□□□□□ -0.94
TRAF3IP2-211ENST00000528599 ELOVL1Q9BW60 279 aa9.2□□□□□ -0.94
TRAF3IP2-211ENST00000528599 MLXQ9UH92 298 aa9.2□□□□□ -0.94
TRAF3IP2-211ENST00000528599 TRAV5A0A0B4J249 113 aa9.2□□□□□ -0.94
TRAF3IP2-211ENST00000528599 SEC14L6B5MCN3 397 aa9.2□□□□□ -0.94
TRAF3IP2-211ENST00000528599 CD33P20138 364 aa9.2□□□□□ -0.94
TRAF3IP2-211ENST00000528599 TAGLN2P37802 199 aaKnown RBP9.2□□□□□ -0.94
TRAF3IP2-211ENST00000528599 PPT1P50897 306 aa9.2□□□□□ -0.94
TRAF3IP2-211ENST00000528599 ZNF726P1Q15940 193 aa9.2□□□□□ -0.94
TRAF3IP2-211ENST00000528599 FAM78BQ5VT40 261 aa9.2□□□□□ -0.94
TRAF3IP2-211ENST00000528599 MIR17HGQ75NE6 70 aa9.2□□□□□ -0.94
TRAF3IP2-211ENST00000528599 SIGLEC8Q9NYZ4 499 aa9.2□□□□□ -0.94
TRAF3IP2-211ENST00000528599 SAP30O75446 220 aa9.19□□□□□ -0.94
TRAF3IP2-211ENST00000528599 FAM122CQ6P4D5 195 aa9.19□□□□□ -0.94
TRAF3IP2-211ENST00000528599 C16orf54Q6UWD8 224 aa9.19□□□□□ -0.94
TRAF3IP2-211ENST00000528599 RNF2Q99496 336 aa9.19□□□□□ -0.94
TRAF3IP2-211ENST00000528599 RARRES2Q99969 163 aa9.19□□□□□ -0.94
TRAF3IP2-211ENST00000528599 SLC25A22Q9H936 323 aa9.19□□□□□ -0.94
TRAF3IP2-211ENST00000528599 FUT9Q9Y231 359 aa9.19□□□□□ -0.94
TRAF3IP2-211ENST00000528599 CTXND1A0A1B0GTU2 59 aa9.18□□□□□ -0.94
TRAF3IP2-211ENST00000528599 A0A1W2PS18 150 aa9.18□□□□□ -0.94
TRAF3IP2-211ENST00000528599 SRP19P09132 144 aaKnown RBP9.18□□□□□ -0.94
TRAF3IP2-211ENST00000528599 RHOBP62745 196 aa9.18□□□□□ -0.94
TRAF3IP2-211ENST00000528599 SOHLH1Q5JUK2 328 aa9.18□□□□□ -0.94
TRAF3IP2-211ENST00000528599 SSX7Q7RTT5 188 aa9.18□□□□□ -0.94
TRAF3IP2-211ENST00000528599 GLMPQ8WWB7 406 aa9.18□□□□□ -0.94
TRAF3IP2-211ENST00000528599 ACTR3CQ9C0K3 210 aaPredicted RBP9.18□□□□□ -0.94
TRAF3IP2-211ENST00000528599 LOC102723971A0A1B0GUV8 181 aa9.17□□□□□ -0.94
TRAF3IP2-211ENST00000528599 IGLL1P15814 213 aa9.17□□□□□ -0.94
TRAF3IP2-211ENST00000528599 ICAM4Q14773 271 aa9.17□□□□□ -0.94
TRAF3IP2-211ENST00000528599 DEFB114Q30KQ6 69 aa9.17□□□□□ -0.94
TRAF3IP2-211ENST00000528599 C1orf194Q5T5A4 169 aa9.17□□□□□ -0.94
TRAF3IP2-211ENST00000528599 S100A7AQ86SG5 101 aa9.17□□□□□ -0.94
TRAF3IP2-211ENST00000528599 OR8I2Q8N0Y5 310 aa9.17□□□□□ -0.94
TRAF3IP2-211ENST00000528599 RAB24Q969Q5 203 aa9.17□□□□□ -0.94
TRAF3IP2-211ENST00000528599 FAM167A-AS1Q96KT0 104 aa9.17□□□□□ -0.94
TRAF3IP2-211ENST00000528599 SLC25A2Q9BXI2 301 aa9.17□□□□□ -0.94
TRAF3IP2-211ENST00000528599 MRPL32Q9BYC8 188 aaKnown RBP9.17□□□□□ -0.94
TRAF3IP2-211ENST00000528599 TECRQ9NZ01 308 aaKnown RBP9.17□□□□□ -0.94
TRAF3IP2-211ENST00000528599 NOTCH3Q9UM47 2321 aa9.17□□□□□ -0.94
TRAF3IP2-211ENST00000528599 A0A1W2PPV4 95 aa9.16□□□□□ -0.94
TRAF3IP2-211ENST00000528599 MAP1LC3B2A6NCE7 125 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms