RNA–Protein interactions for RNA: ENST00000527947.5

RAE1-209, Transcript of ribonucleic acid export 1, humanhuman

TSL 1 (best) BASIC

Gene RAE1, Length 1,503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-209ENST00000527947 PATE2Q6UY27 113 aa8.85□□□□□ -0.99
RAE1-209ENST00000527947 TRPT1Q86TN4 253 aaKnown RBP8.85□□□□□ -0.99
RAE1-209ENST00000527947 RNF126Q9BV68 326 aa8.85□□□□□ -0.99
RAE1-209ENST00000527947 SLC25A32Q9H2D1 315 aa8.85□□□□□ -0.99
RAE1-209ENST00000527947 SLC25A22Q9H936 323 aa8.85□□□□□ -0.99
RAE1-209ENST00000527947 OR5AC2Q9NZP5 309 aa8.85□□□□□ -0.99
RAE1-209ENST00000527947 DOK5Q9P104 306 aa8.85□□□□□ -0.99
RAE1-209ENST00000527947 TENM2Q9NT68 2774 aa8.84□□□□□ -0.99
RAE1-209ENST00000527947 ISLRO14498 428 aa8.84□□□□□ -0.99
RAE1-209ENST00000527947 SOCS3O14543 225 aa8.84□□□□□ -0.99
RAE1-209ENST00000527947 MPC2O95563 127 aa8.84□□□□□ -0.99
RAE1-209ENST00000527947 SPP1P10451 314 aa8.84□□□□□ -0.99
RAE1-209ENST00000527947 RPL7P18124 248 aaKnown RBP8.84□□□□□ -0.99
RAE1-209ENST00000527947 RPL29P47914 159 aaKnown RBP8.84□□□□□ -0.99
RAE1-209ENST00000527947 EWSR1Q01844 656 aaKnown RBP eCLIP8.84□□□□□ -0.99
RAE1-209ENST00000527947 NHLH2Q02577 135 aa8.84□□□□□ -0.99
RAE1-209ENST00000527947 DEFB135Q30KP9 77 aa8.84□□□□□ -0.99
RAE1-209ENST00000527947 TMEM41BQ5BJD5 291 aa8.84□□□□□ -0.99
RAE1-209ENST00000527947 GATAD1Q8WUU5 269 aa8.84□□□□□ -0.99
RAE1-209ENST00000527947 RSG1Q9BU20 258 aa8.84□□□□□ -0.99
RAE1-209ENST00000527947 SCRT1Q9BWW7 348 aa8.84□□□□□ -0.99
RAE1-209ENST00000527947 ARV1Q9H2C2 271 aa8.84□□□□□ -0.99
RAE1-209ENST00000527947 KNCNA6PVL3 124 aa8.83□□□□□ -1
RAE1-209ENST00000527947 PRR20EP86478 221 aa8.83□□□□□ -1
RAE1-209ENST00000527947 PRR20CP86479 221 aa8.83□□□□□ -1
RAE1-209ENST00000527947 PRR20DP86480 221 aa8.83□□□□□ -1
RAE1-209ENST00000527947 PRR20BP86481 221 aa8.83□□□□□ -1
RAE1-209ENST00000527947 PRR20AP86496 221 aa8.83□□□□□ -1
RAE1-209ENST00000527947 RGS21Q2M5E4 152 aa8.83□□□□□ -1
RAE1-209ENST00000527947 ACTL10Q5JWF8 245 aa8.83□□□□□ -1
RAE1-209ENST00000527947 Q6ZRG5 221 aa8.83□□□□□ -1
RAE1-209ENST00000527947 MED28Q9H204 178 aa8.83□□□□□ -1
RAE1-209ENST00000527947 CSMD3Q7Z407 3707 aa8.83□□□□□ -1
RAE1-209ENST00000527947 UBE2L5PA0A1B0GUS4 154 aa8.82□□□□□ -1
RAE1-209ENST00000527947 COX7A2P2O60397 106 aa8.82□□□□□ -1
RAE1-209ENST00000527947 OPCMLQ14982 345 aa8.82□□□□□ -1
RAE1-209ENST00000527947 SPATA31B1PQ5VZV4 182 aa8.82□□□□□ -1
RAE1-209ENST00000527947 OR5C1Q8NGR4 320 aa8.82□□□□□ -1
RAE1-209ENST00000527947 OR1L4Q8NGR5 311 aa8.82□□□□□ -1
RAE1-209ENST00000527947 C16orf92Q96LL3 132 aa8.82□□□□□ -1
RAE1-209ENST00000527947 C17orf77Q96MU5 243 aa8.82□□□□□ -1
RAE1-209ENST00000527947 CLUHP3Q96NS8 147 aa8.82□□□□□ -1
RAE1-209ENST00000527947 UHRF2Q96PU4 802 aa8.82□□□□□ -1
RAE1-209ENST00000527947 DNAJC4Q9NNZ3 241 aa8.82□□□□□ -1
RAE1-209ENST00000527947 BOLA1Q9Y3E2 137 aa8.82□□□□□ -1
RAE1-209ENST00000527947 A0A087X0K7 114 aa8.81□□□□□ -1
RAE1-209ENST00000527947 H3BMM0 161 aa8.81□□□□□ -1
RAE1-209ENST00000527947 CA1P00915 261 aaPredicted RBP8.81□□□□□ -1
RAE1-209ENST00000527947 HLA-DRB4P13762 266 aa8.81□□□□□ -1
RAE1-209ENST00000527947 ATF4P18848 351 aaPredicted RBP8.81□□□□□ -1
RAE1-209ENST00000527947 CXCL3P19876 107 aa8.81□□□□□ -1
RAE1-209ENST00000527947 FGF7P21781 194 aa8.81□□□□□ -1
RAE1-209ENST00000527947 C10orf113Q5VZT2 155 aa8.81□□□□□ -1
RAE1-209ENST00000527947 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.81□□□□□ -1
RAE1-209ENST00000527947 FOXI2Q6ZQN5 318 aa8.81□□□□□ -1
RAE1-209ENST00000527947 LINC00305Q7Z4B0 112 aa8.81□□□□□ -1
RAE1-209ENST00000527947 ASB13Q8WXK3 278 aa8.81□□□□□ -1
RAE1-209ENST00000527947 TMEM37Q8WXS4 190 aa8.81□□□□□ -1
RAE1-209ENST00000527947 LINC00052Q96N35 136 aa8.81□□□□□ -1
RAE1-209ENST00000527947 PFDN5Q99471 154 aa8.81□□□□□ -1
RAE1-209ENST00000527947 SLC39A9Q9NUM3 307 aa8.81□□□□□ -1
RAE1-209ENST00000527947 HLA-DRB4X5D2U9 266 aa8.81□□□□□ -1
RAE1-209ENST00000527947 RPL12P30050 165 aaKnown RBP8.8□□□□□ -1
RAE1-209ENST00000527947 NUTF2P61970 127 aaKnown RBP8.8□□□□□ -1
RAE1-209ENST00000527947 MIC13Q5XKP0 118 aa8.8□□□□□ -1
RAE1-209ENST00000527947 SAV1Q9H4B6 383 aaPredicted RBP8.8□□□□□ -1
RAE1-209ENST00000527947 RPRMQ9NS64 109 aa8.8□□□□□ -1
RAE1-209ENST00000527947 PXMP4Q9Y6I8 212 aa8.8□□□□□ -1
RAE1-209ENST00000527947 DNAH1Q9P2D7 4330 aa8.8□□□□□ -1
RAE1-209ENST00000527947 LYSTQ99698 3801 aa8.8□□□□□ -1
RAE1-209ENST00000527947 JTBO76095 146 aa8.8□□□□□ -1
RAE1-209ENST00000527947 GIG44P09565 113 aaPredicted RBP8.8□□□□□ -1
RAE1-209ENST00000527947 B2MP61769 119 aa8.8□□□□□ -1
RAE1-209ENST00000527947 FCN2Q15485 313 aa8.8□□□□□ -1
RAE1-209ENST00000527947 EBLN2Q6P2I7 272 aa8.8□□□□□ -1
RAE1-209ENST00000527947 BPIFA4PQ86YQ2 179 aa8.8□□□□□ -1
RAE1-209ENST00000527947 OR11H7Q8NGC8 314 aa8.8□□□□□ -1
RAE1-209ENST00000527947 THAP6Q8TBB0 222 aa8.8□□□□□ -1
RAE1-209ENST00000527947 RARRES2Q99969 163 aa8.8□□□□□ -1
RAE1-209ENST00000527947 C1QTNF4Q9BXJ3 329 aa8.8□□□□□ -1
RAE1-209ENST00000527947 NPCDR1Q9BY65 106 aa8.8□□□□□ -1
RAE1-209ENST00000527947 KCNIP2Q9NS61 270 aa8.8□□□□□ -1
RAE1-209ENST00000527947 MBD2Q9UBB5 411 aa8.8□□□□□ -1
RAE1-209ENST00000527947 HSPB11Q9Y547 144 aa8.8□□□□□ -1
RAE1-209ENST00000527947 MRPS12O15235 138 aaKnown RBP8.79□□□□□ -1
RAE1-209ENST00000527947 CXCL2P19875 107 aa8.79□□□□□ -1
RAE1-209ENST00000527947 CLINT1Q14677 625 aa8.79□□□□□ -1
RAE1-209ENST00000527947 OXA1LQ15070 435 aa8.79□□□□□ -1
RAE1-209ENST00000527947 ATP5SQ99766 215 aa8.79□□□□□ -1
RAE1-209ENST00000527947 WDR61Q9GZS3 305 aaKnown RBP8.79□□□□□ -1
RAE1-209ENST00000527947 TRAV8-2A0A0B4J237 113 aa8.78□□□□□ -1
RAE1-209ENST00000527947 A0A0J9YX75 114 aa8.78□□□□□ -1
RAE1-209ENST00000527947 FGL1Q08830 312 aa8.78□□□□□ -1
RAE1-209ENST00000527947 ZNF709Q8N972 641 aa8.78□□□□□ -1
RAE1-209ENST00000527947 OR11H2Q8NH07 326 aa8.78□□□□□ -1
RAE1-209ENST00000527947 C20orf173Q96LM9 149 aa8.78□□□□□ -1
RAE1-209ENST00000527947 AGRNO00468 2067 aa8.77□□□□□ -1
RAE1-209ENST00000527947 C17orf112F2Z3M2 114 aa8.77□□□□□ -1.01
RAE1-209ENST00000527947 IFNA5P01569 189 aa8.77□□□□□ -1.01
RAE1-209ENST00000527947 GIPP09681 153 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms