RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 MFFQ9GZY8 342 aa11.28□□□□□ -0.6
CAPN1-213ENST00000527897 ARL6Q9H0F7 186 aa11.28□□□□□ -0.6
CAPN1-213ENST00000527897 SAV1Q9H4B6 383 aaPredicted RBP11.28□□□□□ -0.6
CAPN1-213ENST00000527897 IGHV3OR16-12A0A075B7B8 117 aa11.27□□□□□ -0.61
CAPN1-213ENST00000527897 H3BRN7 92 aa11.27□□□□□ -0.61
CAPN1-213ENST00000527897 GOSR2O14653 212 aa11.27□□□□□ -0.61
CAPN1-213ENST00000527897 CST7O76096 145 aa11.27□□□□□ -0.61
CAPN1-213ENST00000527897 RBMY1A1P0DJD3 496 aaKnown RBP11.27□□□□□ -0.61
CAPN1-213ENST00000527897 RBMY1CP0DJD4 496 aa11.27□□□□□ -0.61
CAPN1-213ENST00000527897 RBMY1FQ15415 496 aaKnown RBP11.27□□□□□ -0.61
CAPN1-213ENST00000527897 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.27□□□□□ -0.61
CAPN1-213ENST00000527897 C20orf173Q96LM9 149 aa11.27□□□□□ -0.61
CAPN1-213ENST00000527897 RPRMQ9NS64 109 aa11.27□□□□□ -0.61
CAPN1-213ENST00000527897 PTTG2Q9NZH5 202 aa11.27□□□□□ -0.61
CAPN1-213ENST00000527897 X6R8D5 127 aa11.27□□□□□ -0.61
CAPN1-213ENST00000527897 FAM24AA6NFZ4 105 aa11.26□□□□□ -0.61
CAPN1-213ENST00000527897 ZNF705EA8MWA4 302 aaPredicted RBP11.26□□□□□ -0.61
CAPN1-213ENST00000527897 FNDC10F2Z333 226 aa11.26□□□□□ -0.61
CAPN1-213ENST00000527897 UPK1BO75841 260 aa11.26□□□□□ -0.61
CAPN1-213ENST00000527897 PVALBP20472 110 aaPredicted RBP11.26□□□□□ -0.61
CAPN1-213ENST00000527897 SAMD13Q5VXD3 122 aa11.26□□□□□ -0.61
CAPN1-213ENST00000527897 IGFL4Q6B9Z1 124 aa11.26□□□□□ -0.61
CAPN1-213ENST00000527897 CSNK1G2-AS1Q8NCQ2 148 aa11.26□□□□□ -0.61
CAPN1-213ENST00000527897 LINC00476Q8WZB0 136 aa11.26□□□□□ -0.61
CAPN1-213ENST00000527897 GPR82Q96P67 336 aa11.26□□□□□ -0.61
CAPN1-213ENST00000527897 SHANK2-AS3Q9BTD1 123 aa11.26□□□□□ -0.61
CAPN1-213ENST00000527897 AGPAT2O15120 278 aa11.25□□□□□ -0.61
CAPN1-213ENST00000527897 FAM78BQ5VT40 261 aa11.25□□□□□ -0.61
CAPN1-213ENST00000527897 ZNF546Q86UE3 836 aa11.25□□□□□ -0.61
CAPN1-213ENST00000527897 SLC35B3Q9H1N7 401 aa11.25□□□□□ -0.61
CAPN1-213ENST00000527897 ELOA3CA0A087WX78 387 aaPredicted RBP11.24□□□□□ -0.61
CAPN1-213ENST00000527897 A0A0J9YX75 114 aa11.24□□□□□ -0.61
CAPN1-213ENST00000527897 DEDDO75618 318 aa11.24□□□□□ -0.61
CAPN1-213ENST00000527897 RPL7P18124 248 aaKnown RBP11.24□□□□□ -0.61
CAPN1-213ENST00000527897 RAB32Q13637 225 aa11.24□□□□□ -0.61
CAPN1-213ENST00000527897 S100A7AQ86SG5 101 aa11.24□□□□□ -0.61
CAPN1-213ENST00000527897 RNF182Q8N6D2 247 aa11.24□□□□□ -0.61
CAPN1-213ENST00000527897 LRRC20Q8TCA0 184 aa11.24□□□□□ -0.61
CAPN1-213ENST00000527897 C17orf77Q96MU5 243 aa11.24□□□□□ -0.61
CAPN1-213ENST00000527897 GGACTQ9BVM4 153 aa11.24□□□□□ -0.61
CAPN1-213ENST00000527897 ARV1Q9H2C2 271 aa11.24□□□□□ -0.61
CAPN1-213ENST00000527897 GPN1Q9HCN4 374 aaPredicted RBP11.24□□□□□ -0.61
CAPN1-213ENST00000527897 COX7A2P2O60397 106 aa11.23□□□□□ -0.61
CAPN1-213ENST00000527897 HLA-DMBP28068 263 aa11.23□□□□□ -0.61
CAPN1-213ENST00000527897 PLP1P60201 277 aa11.23□□□□□ -0.61
CAPN1-213ENST00000527897 PSG9Q00887 426 aa11.23□□□□□ -0.61
CAPN1-213ENST00000527897 IFITM3Q01628 133 aa11.23□□□□□ -0.61
CAPN1-213ENST00000527897 SPATA31B1PQ5VZV4 182 aa11.23□□□□□ -0.61
CAPN1-213ENST00000527897 PATE2Q6UY27 113 aa11.23□□□□□ -0.61
CAPN1-213ENST00000527897 ZNF738Q8NE65 137 aa11.23□□□□□ -0.61
CAPN1-213ENST00000527897 MGST2Q99735 147 aa11.23□□□□□ -0.61
CAPN1-213ENST00000527897 SIX6O95475 246 aa11.22□□□□□ -0.61
CAPN1-213ENST00000527897 SNRPCP09234 159 aaKnown RBP11.22□□□□□ -0.61
CAPN1-213ENST00000527897 ZNF705DP0CH99 300 aaPredicted RBP11.22□□□□□ -0.61
CAPN1-213ENST00000527897 ZNF705BP0CI00 300 aaPredicted RBP11.22□□□□□ -0.61
CAPN1-213ENST00000527897 PRB4P10163 310 aaPredicted RBP11.22□□□□□ -0.61
CAPN1-213ENST00000527897 EMP1P54849 157 aa11.22□□□□□ -0.61
CAPN1-213ENST00000527897 RAB31Q13636 194 aa11.22□□□□□ -0.61
CAPN1-213ENST00000527897 ZNF767PQ75MW2 155 aa11.22□□□□□ -0.61
CAPN1-213ENST00000527897 LINC00305Q7Z4B0 112 aa11.22□□□□□ -0.61
CAPN1-213ENST00000527897 ZNF709Q8N972 641 aa11.22□□□□□ -0.61
CAPN1-213ENST00000527897 UQCC1Q9NVA1 299 aa11.22□□□□□ -0.61
CAPN1-213ENST00000527897 UBE2L5PA0A1B0GUS4 154 aa11.21□□□□□ -0.61
CAPN1-213ENST00000527897 IGSF23A1L1A6 192 aa11.21□□□□□ -0.61
CAPN1-213ENST00000527897 CAMLGP49069 296 aa11.21□□□□□ -0.61
CAPN1-213ENST00000527897 Q6ZTC4 211 aa11.21□□□□□ -0.61
CAPN1-213ENST00000527897 NRARPQ7Z6K4 114 aa11.21□□□□□ -0.61
CAPN1-213ENST00000527897 STX12Q86Y82 276 aa11.21□□□□□ -0.61
CAPN1-213ENST00000527897 C2CD4CQ8TF44 421 aa11.21□□□□□ -0.61
CAPN1-213ENST00000527897 C11orf1Q9H5F2 150 aa11.21□□□□□ -0.61
CAPN1-213ENST00000527897 LYRM2Q9NU23 88 aaPredicted RBP11.21□□□□□ -0.61
CAPN1-213ENST00000527897 CELA1Q9UNI1 258 aa11.21□□□□□ -0.61
CAPN1-213ENST00000527897 TRAV8-2A0A0B4J237 113 aa11.2□□□□□ -0.62
CAPN1-213ENST00000527897 IGLL5B9A064 214 aa11.2□□□□□ -0.62
CAPN1-213ENST00000527897 INMT-MINDY4F8WBC2 141 aa11.2□□□□□ -0.62
CAPN1-213ENST00000527897 SULT1A1P50225 295 aa11.2□□□□□ -0.62
CAPN1-213ENST00000527897 BAXQ07812 192 aa11.2□□□□□ -0.62
CAPN1-213ENST00000527897 LRRC37A5PQ49AS3 106 aa11.2□□□□□ -0.62
CAPN1-213ENST00000527897 PXDC1Q5TGL8 231 aa11.2□□□□□ -0.62
CAPN1-213ENST00000527897 C10orf113Q5VZT2 155 aa11.2□□□□□ -0.62
CAPN1-213ENST00000527897 MIC13Q5XKP0 118 aa11.2□□□□□ -0.62
CAPN1-213ENST00000527897 TMEM252Q8N6L7 170 aa11.2□□□□□ -0.62
CAPN1-213ENST00000527897 HRH4Q9H3N8 390 aa11.2□□□□□ -0.62
CAPN1-213ENST00000527897 GOLT1BQ9Y3E0 138 aa11.2□□□□□ -0.62
CAPN1-213ENST00000527897 C11orf94C9JXX5 98 aa11.19□□□□□ -0.62
CAPN1-213ENST00000527897 H3BTX0 84 aa11.19□□□□□ -0.62
CAPN1-213ENST00000527897 DUSP14O95147 198 aaKnown RBP11.19□□□□□ -0.62
CAPN1-213ENST00000527897 FGF7P21781 194 aa11.19□□□□□ -0.62
CAPN1-213ENST00000527897 S100A11P31949 105 aa11.19□□□□□ -0.62
CAPN1-213ENST00000527897 CNN1P51911 297 aaKnown RBP11.19□□□□□ -0.62
CAPN1-213ENST00000527897 DEFA1P59665 94 aa11.19□□□□□ -0.62
CAPN1-213ENST00000527897 DEFA3P59666 94 aa11.19□□□□□ -0.62
CAPN1-213ENST00000527897 HBG1P69891 147 aa11.19□□□□□ -0.62
CAPN1-213ENST00000527897 HBG2P69892 147 aa11.19□□□□□ -0.62
CAPN1-213ENST00000527897 IL15RAQ13261 267 aa11.19□□□□□ -0.62
CAPN1-213ENST00000527897 SPINK13Q1W4C9 94 aa11.19□□□□□ -0.62
CAPN1-213ENST00000527897 ZNF705AQ6ZN79 300 aaPredicted RBP11.19□□□□□ -0.62
CAPN1-213ENST00000527897 Q6ZRG5 221 aa11.19□□□□□ -0.62
CAPN1-213ENST00000527897 CLUHP3Q96NS8 147 aa11.19□□□□□ -0.62
CAPN1-213ENST00000527897 TMEM208Q9BTX3 173 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms