RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 F5H768 121 aa9.29□□□□□ -0.92
DDX41-210ENST00000509576 H3BP45 60 aa9.29□□□□□ -0.92
DDX41-210ENST00000509576 MRPS12O15235 138 aaKnown RBP9.29□□□□□ -0.92
DDX41-210ENST00000509576 NUDT3O95989 172 aa9.29□□□□□ -0.92
DDX41-210ENST00000509576 ORM2P19652 201 aa9.29□□□□□ -0.92
DDX41-210ENST00000509576 ATP5IP56385 69 aaPredicted RBP9.29□□□□□ -0.92
DDX41-210ENST00000509576 FAM3BP58499 235 aaPredicted RBP9.29□□□□□ -0.92
DDX41-210ENST00000509576 Q8N1X5 172 aa9.29□□□□□ -0.92
DDX41-210ENST00000509576 LRTM2Q8N967 370 aa9.29□□□□□ -0.92
DDX41-210ENST00000509576 PARD6GQ9BYG4 376 aaPredicted RBP9.29□□□□□ -0.92
DDX41-210ENST00000509576 SLIRPQ9GZT3 109 aaKnown RBP9.29□□□□□ -0.92
DDX41-210ENST00000509576 MCUBQ9NWR8 336 aa9.29□□□□□ -0.92
DDX41-210ENST00000509576 WRBO00258 174 aa9.28□□□□□ -0.92
DDX41-210ENST00000509576 INSP01308 110 aa9.28□□□□□ -0.92
DDX41-210ENST00000509576 TNFSF8P32971 234 aa9.28□□□□□ -0.92
DDX41-210ENST00000509576 GALR1P47211 349 aa9.28□□□□□ -0.92
DDX41-210ENST00000509576 MEOX2P50222 304 aa9.28□□□□□ -0.92
DDX41-210ENST00000509576 PATE2Q6UY27 113 aa9.28□□□□□ -0.92
DDX41-210ENST00000509576 ACOT7LQ6ZUV0 252 aa9.28□□□□□ -0.92
DDX41-210ENST00000509576 OR4D5Q8NGN0 318 aa9.28□□□□□ -0.92
DDX41-210ENST00000509576 UHRF2Q96PU4 802 aa9.28□□□□□ -0.92
DDX41-210ENST00000509576 TMEM208Q9BTX3 173 aa9.28□□□□□ -0.92
DDX41-210ENST00000509576 CACFD1Q9UGQ2 172 aa9.28□□□□□ -0.92
DDX41-210ENST00000509576 PAIP2BQ9ULR5 123 aaKnown RBP9.28□□□□□ -0.92
DDX41-210ENST00000509576 SLC45A2Q9UMX9 530 aa9.28□□□□□ -0.92
DDX41-210ENST00000509576 TMED3Q9Y3Q3 217 aa9.28□□□□□ -0.92
DDX41-210ENST00000509576 BOLA2-SMG1P6H3BVE0 249 aa9.27□□□□□ -0.93
DDX41-210ENST00000509576 CXCL3P19876 107 aa9.27□□□□□ -0.93
DDX41-210ENST00000509576 HOXA5P20719 270 aa9.27□□□□□ -0.93
DDX41-210ENST00000509576 PPP1R1AQ13522 171 aa9.27□□□□□ -0.93
DDX41-210ENST00000509576 SPATA12Q7Z6I5 190 aa9.27□□□□□ -0.93
DDX41-210ENST00000509576 TMED4Q7Z7H5 227 aa9.27□□□□□ -0.93
DDX41-210ENST00000509576 LINC00612Q8N6U2 182 aa9.27□□□□□ -0.93
DDX41-210ENST00000509576 ZBTB8BQ8NAP8 495 aaPredicted RBP9.27□□□□□ -0.93
DDX41-210ENST00000509576 OR1B1Q8NGR6 318 aa9.27□□□□□ -0.93
DDX41-210ENST00000509576 RNASE8Q8TDE3 154 aaKnown RBP9.27□□□□□ -0.93
DDX41-210ENST00000509576 ATG101Q9BSB4 218 aa9.27□□□□□ -0.93
DDX41-210ENST00000509576 SHANK2-AS3Q9BTD1 123 aa9.27□□□□□ -0.93
DDX41-210ENST00000509576 CCDC59Q9P031 241 aaKnown RBP9.27□□□□□ -0.93
DDX41-210ENST00000509576 SCP2D1Q9UJQ7 156 aa9.27□□□□□ -0.93
DDX41-210ENST00000509576 SYNGR2O43760 224 aa9.26□□□□□ -0.93
DDX41-210ENST00000509576 SNRPCP09234 159 aaKnown RBP9.26□□□□□ -0.93
DDX41-210ENST00000509576 SLC25A6P12236 298 aa9.26□□□□□ -0.93
DDX41-210ENST00000509576 FUSP35637 526 aaKnown RBP eCLIP9.26□□□□□ -0.93
DDX41-210ENST00000509576 RAB11AP62491 216 aa9.26□□□□□ -0.93
DDX41-210ENST00000509576 FGL1Q08830 312 aa9.26□□□□□ -0.93
DDX41-210ENST00000509576 GGNBP1Q5YKI7 109 aa9.26□□□□□ -0.93
DDX41-210ENST00000509576 SSX7Q7RTT5 188 aa9.26□□□□□ -0.93
DDX41-210ENST00000509576 OR8A1Q8NGG7 326 aa9.26□□□□□ -0.93
DDX41-210ENST00000509576 PFDN2Q9UHV9 154 aa9.26□□□□□ -0.93
DDX41-210ENST00000509576 VPS13BQ7Z7G8 4022 aa9.26□□□□□ -0.93
DDX41-210ENST00000509576 DUXBA0A1W2PPF3 345 aa9.25□□□□□ -0.93
DDX41-210ENST00000509576 CBY3A6NI87 242 aa9.25□□□□□ -0.93
DDX41-210ENST00000509576 PRAC2D3DTV9 90 aa9.25□□□□□ -0.93
DDX41-210ENST00000509576 DUSP14O95147 198 aaKnown RBP9.25□□□□□ -0.93
DDX41-210ENST00000509576 ATP5G1P05496 136 aa9.25□□□□□ -0.93
DDX41-210ENST00000509576 FABP1P07148 127 aa9.25□□□□□ -0.93
DDX41-210ENST00000509576 ATP5G3P48201 142 aa9.25□□□□□ -0.93
DDX41-210ENST00000509576 SRPXP78539 464 aa9.25□□□□□ -0.93
DDX41-210ENST00000509576 HIST1H1AQ02539 215 aaPredicted RBP9.25□□□□□ -0.93
DDX41-210ENST00000509576 TMEM128Q5BJH2 165 aa9.25□□□□□ -0.93
DDX41-210ENST00000509576 SPANXN5Q5MJ07 72 aa9.25□□□□□ -0.93
DDX41-210ENST00000509576 MORN5Q5VZ52 161 aa9.25□□□□□ -0.93
DDX41-210ENST00000509576 CYP2G1PQ6ZSU1 146 aa9.25□□□□□ -0.93
DDX41-210ENST00000509576 ZNF738Q8NE65 137 aa9.25□□□□□ -0.93
DDX41-210ENST00000509576 BPIFCQ8NFQ6 507 aa9.25□□□□□ -0.93
DDX41-210ENST00000509576 RABL2BQ9UNT1 228 aa9.25□□□□□ -0.93
DDX41-210ENST00000509576 V9GYH0 126 aa9.25□□□□□ -0.93
DDX41-210ENST00000509576 A0A087X0K7 114 aa9.24□□□□□ -0.93
DDX41-210ENST00000509576 ADAP1O75689 374 aa9.24□□□□□ -0.93
DDX41-210ENST00000509576 SFT2D2O95562 160 aa9.24□□□□□ -0.93
DDX41-210ENST00000509576 HOXB5P09067 269 aa9.24□□□□□ -0.93
DDX41-210ENST00000509576 PLP1P60201 277 aa9.24□□□□□ -0.93
DDX41-210ENST00000509576 POLR2GP62487 172 aaKnown RBP eCLIP9.24□□□□□ -0.93
DDX41-210ENST00000509576 PSG3Q16557 428 aa9.24□□□□□ -0.93
DDX41-210ENST00000509576 SAMD13Q5VXD3 122 aa9.24□□□□□ -0.93
DDX41-210ENST00000509576 TMEM144Q7Z5S9 345 aa9.24□□□□□ -0.93
DDX41-210ENST00000509576 GPR141Q7Z602 305 aa9.24□□□□□ -0.93
DDX41-210ENST00000509576 LINC01587Q99440 93 aa9.24□□□□□ -0.93
DDX41-210ENST00000509576 TMEM147Q9BVK8 224 aa9.24□□□□□ -0.93
DDX41-210ENST00000509576 MRPS26Q9BYN8 205 aaKnown RBP9.24□□□□□ -0.93
DDX41-210ENST00000509576 NOP10Q9NPE3 64 aaKnown RBP9.24□□□□□ -0.93
DDX41-210ENST00000509576 SCRT2Q9NQ03 307 aa9.24□□□□□ -0.93
DDX41-210ENST00000509576 MYCBP2O75592 4640 aa9.23□□□□□ -0.93
DDX41-210ENST00000509576 LINC00854A0A1B0GVQ3 168 aa9.23□□□□□ -0.93
DDX41-210ENST00000509576 SLC17A3O00476 420 aa9.23□□□□□ -0.93
DDX41-210ENST00000509576 CFDP00746 253 aaPredicted RBP9.23□□□□□ -0.93
DDX41-210ENST00000509576 ANXA3P12429 323 aa9.23□□□□□ -0.93
DDX41-210ENST00000509576 HTN1P15515 57 aa9.23□□□□□ -0.93
DDX41-210ENST00000509576 VAMP1P23763 118 aa9.23□□□□□ -0.93
DDX41-210ENST00000509576 TAS2R60P59551 318 aa9.23□□□□□ -0.93
DDX41-210ENST00000509576 ID3Q02535 119 aa9.23□□□□□ -0.93
DDX41-210ENST00000509576 AKR1C1Q04828 323 aa9.23□□□□□ -0.93
DDX41-210ENST00000509576 ARL16Q0P5N6 197 aa9.23□□□□□ -0.93
DDX41-210ENST00000509576 ESRGQ1W209 222 aa9.23□□□□□ -0.93
DDX41-210ENST00000509576 Q6ZRN7 208 aaPredicted RBP9.23□□□□□ -0.93
DDX41-210ENST00000509576 GPR82Q96P67 336 aa9.23□□□□□ -0.93
DDX41-210ENST00000509576 SCGB3A2Q96PL1 93 aa9.23□□□□□ -0.93
DDX41-210ENST00000509576 Q9H8V8 135 aa9.23□□□□□ -0.93
DDX41-210ENST00000509576 TRAV26-1A0A087WT03 109 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms