RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 PRRC2CQ9Y520 2896 aaKnown RBP13.63□□□□□ -0.23
SQSTM1-211ENST00000506690 A0A1W2PPI3 338 aa13.62□□□□□ -0.23
SQSTM1-211ENST00000506690 TMEM164Q5U3C3 297 aa13.62□□□□□ -0.23
SQSTM1-211ENST00000506690 PVRIGQ6DKI7 326 aa13.62□□□□□ -0.23
SQSTM1-211ENST00000506690 FAM216BQ8N7L0 139 aa13.62□□□□□ -0.23
SQSTM1-211ENST00000506690 CCL13Q99616 98 aa13.62□□□□□ -0.23
SQSTM1-211ENST00000506690 RNF7Q9UBF6 113 aa13.62□□□□□ -0.23
SQSTM1-211ENST00000506690 CACNA1GO43497 2377 aa13.62□□□□□ -0.23
SQSTM1-211ENST00000506690 A0A1W2PNU3 283 aaPredicted RBP13.62□□□□□ -0.23
SQSTM1-211ENST00000506690 IGLV2-23P01705 113 aa13.62□□□□□ -0.23
SQSTM1-211ENST00000506690 CACNG7P62955 275 aa13.62□□□□□ -0.23
SQSTM1-211ENST00000506690 DHRS13Q6UX07 377 aa13.62□□□□□ -0.23
SQSTM1-211ENST00000506690 ZNF788Q6ZQV5 615 aa13.62□□□□□ -0.23
SQSTM1-211ENST00000506690 ZNF493Q6ZR52 646 aa13.62□□□□□ -0.23
SQSTM1-211ENST00000506690 GOLT1AQ6ZVE7 132 aa13.62□□□□□ -0.23
SQSTM1-211ENST00000506690 C9orf106Q8NAJ2 232 aa13.62□□□□□ -0.23
SQSTM1-211ENST00000506690 SIGLEC8Q9NYZ4 499 aa13.62□□□□□ -0.23
SQSTM1-211ENST00000506690 FABP2P12104 132 aa13.61□□□□□ -0.23
SQSTM1-211ENST00000506690 FAM169BQ8N8A8 192 aa13.61□□□□□ -0.23
SQSTM1-211ENST00000506690 DEFB108BQ8NET1 73 aa13.61□□□□□ -0.23
SQSTM1-211ENST00000506690 TNFRSF14Q92956 283 aa13.61□□□□□ -0.23
SQSTM1-211ENST00000506690 TMEM189A5PLL7 270 aa13.61□□□□□ -0.23
SQSTM1-211ENST00000506690 U3KQK5 164 aa13.61□□□□□ -0.23
SQSTM1-211ENST00000506690 PCP2Q8IVA1 136 aa13.6□□□□□ -0.23
SQSTM1-211ENST00000506690 EXOC3-AS1Q8N2X6 119 aa13.6□□□□□ -0.23
SQSTM1-211ENST00000506690 TMEM178AQ8NBL3 297 aa13.6□□□□□ -0.23
SQSTM1-211ENST00000506690 LINC00312Q9Y6C7 94 aa13.6□□□□□ -0.23
SQSTM1-211ENST00000506690 SCGB1A1P11684 91 aa13.6□□□□□ -0.23
SQSTM1-211ENST00000506690 PAX8Q06710 450 aa13.6□□□□□ -0.23
SQSTM1-211ENST00000506690 FER1L6-AS2Q96M78 137 aa13.6□□□□□ -0.23
SQSTM1-211ENST00000506690 ZNF71Q9NQZ8 489 aaPredicted RBP13.6□□□□□ -0.23
SQSTM1-211ENST00000506690 PLSCR4Q9NRQ2 329 aa13.6□□□□□ -0.23
SQSTM1-211ENST00000506690 SLC25A15Q9Y619 301 aa13.6□□□□□ -0.23
SQSTM1-211ENST00000506690 NDUFS8O00217 210 aa13.59□□□□□ -0.23
SQSTM1-211ENST00000506690 IGHG3P01860 377 aa13.59□□□□□ -0.23
SQSTM1-211ENST00000506690 TCTAP57738 103 aa13.59□□□□□ -0.23
SQSTM1-211ENST00000506690 MEF2CQ06413 473 aaPredicted RBP13.59□□□□□ -0.23
SQSTM1-211ENST00000506690 TIMM23BQ5SRD1 257 aa13.59□□□□□ -0.23
SQSTM1-211ENST00000506690 SAMD5Q5TGI4 173 aa13.59□□□□□ -0.23
SQSTM1-211ENST00000506690 Q6AWC8 147 aa13.59□□□□□ -0.23
SQSTM1-211ENST00000506690 TMEM14CQ9P0S9 112 aa13.59□□□□□ -0.23
SQSTM1-211ENST00000506690 LOC389332A0A1B0GUA5 103 aa13.59□□□□□ -0.23
SQSTM1-211ENST00000506690 TEX48A0A1B0GUV7 120 aa13.59□□□□□ -0.23
SQSTM1-211ENST00000506690 D6R8Y8 96 aa13.59□□□□□ -0.23
SQSTM1-211ENST00000506690 MRGPRG-AS1Q2M3A8 158 aa13.59□□□□□ -0.23
SQSTM1-211ENST00000506690 PRSS57Q6UWY2 283 aa13.59□□□□□ -0.23
SQSTM1-211ENST00000506690 GNG7O60262 68 aa13.58□□□□□ -0.24
SQSTM1-211ENST00000506690 HCP5Q6MZN7 132 aa13.58□□□□□ -0.24
SQSTM1-211ENST00000506690 ZNF414Q96IQ9 312 aa13.58□□□□□ -0.24
SQSTM1-211ENST00000506690 HIGD1AQ9Y241 93 aa13.58□□□□□ -0.24
SQSTM1-211ENST00000506690 PLXNB1O43157 2135 aa13.58□□□□□ -0.24
SQSTM1-211ENST00000506690 CADP27708 2225 aa13.58□□□□□ -0.24
SQSTM1-211ENST00000506690 HBDP02042 147 aa13.58□□□□□ -0.24
SQSTM1-211ENST00000506690 SMIM13P0DJ93 91 aa13.58□□□□□ -0.24
SQSTM1-211ENST00000506690 TMEM75Q8N9X5 138 aa13.58□□□□□ -0.24
SQSTM1-211ENST00000506690 TPSG1Q9NRR2 321 aa13.58□□□□□ -0.24
SQSTM1-211ENST00000506690 INTS1Q8N201 2190 aaKnown RBP13.57□□□□□ -0.24
SQSTM1-211ENST00000506690 IGLV3-9A0A075B6K5 115 aa13.57□□□□□ -0.24
SQSTM1-211ENST00000506690 GLRXP35754 106 aa13.57□□□□□ -0.24
SQSTM1-211ENST00000506690 NMUP48645 174 aa13.57□□□□□ -0.24
SQSTM1-211ENST00000506690 CRIP1P50238 77 aa13.57□□□□□ -0.24
SQSTM1-211ENST00000506690 DIAPH2-AS1Q14236 149 aa13.57□□□□□ -0.24
SQSTM1-211ENST00000506690 PPIAL4CA0A0B4J2A2 164 aa13.56□□□□□ -0.24
SQSTM1-211ENST00000506690 CT45A10P0DMU9 189 aa13.56□□□□□ -0.24
SQSTM1-211ENST00000506690 AZU1P20160 251 aa13.56□□□□□ -0.24
SQSTM1-211ENST00000506690 PIFOQ8TCI5 191 aa13.56□□□□□ -0.24
SQSTM1-211ENST00000506690 IFI27L1Q96BM0 104 aa13.56□□□□□ -0.24
SQSTM1-211ENST00000506690 PRELID3AQ96N28 172 aa13.56□□□□□ -0.24
SQSTM1-211ENST00000506690 SLC25A17O43808 307 aa13.56□□□□□ -0.24
SQSTM1-211ENST00000506690 GOSR1O95249 250 aa13.56□□□□□ -0.24
SQSTM1-211ENST00000506690 TNFRSF1AP19438 455 aa13.56□□□□□ -0.24
SQSTM1-211ENST00000506690 RPL24P83731 157 aaKnown RBP13.56□□□□□ -0.24
SQSTM1-211ENST00000506690 FAM104BQ5XKR9 115 aa13.56□□□□□ -0.24
SQSTM1-211ENST00000506690 SMPXQ9UHP9 88 aa13.56□□□□□ -0.24
SQSTM1-211ENST00000506690 NKX2-8O15522 239 aa13.55□□□□□ -0.24
SQSTM1-211ENST00000506690 ORMDL3Q8N138 153 aa13.55□□□□□ -0.24
SQSTM1-211ENST00000506690 TMEM190Q8WZ59 177 aa13.55□□□□□ -0.24
SQSTM1-211ENST00000506690 SLC25A39Q9BZJ4 359 aaPredicted RBP13.55□□□□□ -0.24
SQSTM1-211ENST00000506690 PRR33A8MZF0 331 aa13.55□□□□□ -0.24
SQSTM1-211ENST00000506690 FCGR2BP31994 310 aaPredicted RBP13.55□□□□□ -0.24
SQSTM1-211ENST00000506690 FXYD7P58549 80 aa13.55□□□□□ -0.24
SQSTM1-211ENST00000506690 TPPP3Q9BW30 176 aa13.55□□□□□ -0.24
SQSTM1-211ENST00000506690 TNFAIP6P98066 277 aaPredicted RBP13.54□□□□□ -0.24
SQSTM1-211ENST00000506690 PSG3Q16557 428 aa13.54□□□□□ -0.24
SQSTM1-211ENST00000506690 VMA21Q3ZAQ7 101 aa13.54□□□□□ -0.24
SQSTM1-211ENST00000506690 TEX36Q5VZQ5 186 aa13.54□□□□□ -0.24
SQSTM1-211ENST00000506690 RITA1Q96K30 269 aa13.54□□□□□ -0.24
SQSTM1-211ENST00000506690 SIGMAR1Q99720 223 aa13.54□□□□□ -0.24
SQSTM1-211ENST00000506690 ASCL2Q99929 193 aa13.54□□□□□ -0.24
SQSTM1-211ENST00000506690 HIGD1BQ9P298 99 aa13.54□□□□□ -0.24
SQSTM1-211ENST00000506690 PSG8Q9UQ74 426 aa13.54□□□□□ -0.24
SQSTM1-211ENST00000506690 F11RQ9Y624 299 aaKnown RBP13.54□□□□□ -0.24
SQSTM1-211ENST00000506690 PPIAL4EA0A075B759 164 aa13.54□□□□□ -0.24
SQSTM1-211ENST00000506690 IGHV3-21A0A0B4J1V1 117 aa13.54□□□□□ -0.24
SQSTM1-211ENST00000506690 PPIAL4FP0DN26 164 aa13.54□□□□□ -0.24
SQSTM1-211ENST00000506690 CCL3L1P16619 93 aa13.54□□□□□ -0.24
SQSTM1-211ENST00000506690 FXYD2P54710 66 aa13.54□□□□□ -0.24
SQSTM1-211ENST00000506690 AMN1Q8IY45 258 aa13.54□□□□□ -0.24
SQSTM1-211ENST00000506690 VGLL1Q99990 258 aa13.54□□□□□ -0.24
SQSTM1-211ENST00000506690 SERTM2A0A1B0GWG4 89 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms