RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 TMEM208Q9BTX3 173 aa11.43□□□□□ -0.58
PDLIM7-213ENST00000505074 RSG1Q9BU20 258 aa11.43□□□□□ -0.58
PDLIM7-213ENST00000505074 SCRT2Q9NQ03 307 aa11.43□□□□□ -0.58
PDLIM7-213ENST00000505074 STRAPQ9Y3F4 350 aaKnown RBP11.43□□□□□ -0.58
PDLIM7-213ENST00000505074 A0A0J9YX75 114 aa11.42□□□□□ -0.58
PDLIM7-213ENST00000505074 TEX48A0A1B0GUV7 120 aa11.42□□□□□ -0.58
PDLIM7-213ENST00000505074 ZNF98A6NK75 572 aa11.42□□□□□ -0.58
PDLIM7-213ENST00000505074 S100A7P31151 101 aa11.42□□□□□ -0.58
PDLIM7-213ENST00000505074 FAM222AQ5U5X8 452 aa11.42□□□□□ -0.58
PDLIM7-213ENST00000505074 ACOT7LQ6ZUV0 252 aa11.42□□□□□ -0.58
PDLIM7-213ENST00000505074 NIPSNAP3BQ9BS92 247 aa11.42□□□□□ -0.58
PDLIM7-213ENST00000505074 DOK5Q9P104 306 aa11.42□□□□□ -0.58
PDLIM7-213ENST00000505074 LOC102723971A0A1B0GUV8 181 aa11.41□□□□□ -0.58
PDLIM7-213ENST00000505074 PAX9P55771 341 aa11.41□□□□□ -0.58
PDLIM7-213ENST00000505074 C20orf173Q96LM9 149 aa11.41□□□□□ -0.58
PDLIM7-213ENST00000505074 ADAP1O75689 374 aa11.4□□□□□ -0.58
PDLIM7-213ENST00000505074 RRN3P1Q2M238 152 aa11.4□□□□□ -0.58
PDLIM7-213ENST00000505074 SPANXN2Q5MJ10 180 aa11.4□□□□□ -0.58
PDLIM7-213ENST00000505074 TRIQKQ629K1 86 aa11.4□□□□□ -0.58
PDLIM7-213ENST00000505074 DEDD2Q8WXF8 326 aa11.4□□□□□ -0.58
PDLIM7-213ENST00000505074 CLUHP3Q96NS8 147 aa11.4□□□□□ -0.58
PDLIM7-213ENST00000505074 DKK2Q9UBU2 259 aa11.4□□□□□ -0.58
PDLIM7-213ENST00000505074 SLC45A2Q9UMX9 530 aa11.4□□□□□ -0.58
PDLIM7-213ENST00000505074 YTHDF2Q9Y5A9 579 aaKnown RBP11.4□□□□□ -0.58
PDLIM7-213ENST00000505074 PRSS46E5RG02 174 aa11.39□□□□□ -0.59
PDLIM7-213ENST00000505074 SSSCA1O60232 199 aa11.39□□□□□ -0.59
PDLIM7-213ENST00000505074 IL5P05113 134 aa11.39□□□□□ -0.59
PDLIM7-213ENST00000505074 RAP2BP61225 183 aa11.39□□□□□ -0.59
PDLIM7-213ENST00000505074 POLR2GP62487 172 aaKnown RBP eCLIP11.39□□□□□ -0.59
PDLIM7-213ENST00000505074 IGFL4Q6B9Z1 124 aa11.39□□□□□ -0.59
PDLIM7-213ENST00000505074 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.39□□□□□ -0.59
PDLIM7-213ENST00000505074 TMEM182Q6ZP80 229 aaPredicted RBP11.39□□□□□ -0.59
PDLIM7-213ENST00000505074 C1orf158Q8N1D5 194 aa11.39□□□□□ -0.59
PDLIM7-213ENST00000505074 GPR82Q96P67 336 aa11.39□□□□□ -0.59
PDLIM7-213ENST00000505074 PSENENQ9NZ42 101 aa11.39□□□□□ -0.59
PDLIM7-213ENST00000505074 LINC00854A0A1B0GVQ3 168 aa11.38□□□□□ -0.59
PDLIM7-213ENST00000505074 SCGB1D2O95969 90 aa11.38□□□□□ -0.59
PDLIM7-213ENST00000505074 OR5G3P0C626 314 aa11.38□□□□□ -0.59
PDLIM7-213ENST00000505074 UBE2MP61081 183 aaKnown RBP11.38□□□□□ -0.59
PDLIM7-213ENST00000505074 DAD1P61803 113 aa11.38□□□□□ -0.59
PDLIM7-213ENST00000505074 CYP2G1PQ6ZSU1 146 aa11.38□□□□□ -0.59
PDLIM7-213ENST00000505074 CCDC190Q86UF4 302 aa11.38□□□□□ -0.59
PDLIM7-213ENST00000505074 RNF182Q8N6D2 247 aa11.38□□□□□ -0.59
PDLIM7-213ENST00000505074 ZNF738Q8NE65 137 aa11.38□□□□□ -0.59
PDLIM7-213ENST00000505074 OR4D5Q8NGN0 318 aa11.38□□□□□ -0.59
PDLIM7-213ENST00000505074 HIGD1AQ9Y241 93 aa11.38□□□□□ -0.59
PDLIM7-213ENST00000505074 C9orf170A2RU37 121 aa11.37□□□□□ -0.59
PDLIM7-213ENST00000505074 M0R2Z0 102 aa11.37□□□□□ -0.59
PDLIM7-213ENST00000505074 DUSP14O95147 198 aaKnown RBP11.37□□□□□ -0.59
PDLIM7-213ENST00000505074 INSP01308 110 aa11.37□□□□□ -0.59
PDLIM7-213ENST00000505074 CNN1P51911 297 aaKnown RBP11.37□□□□□ -0.59
PDLIM7-213ENST00000505074 RRAS2P62070 204 aaPredicted RBP11.37□□□□□ -0.59
PDLIM7-213ENST00000505074 SPINK13Q1W4C9 94 aa11.37□□□□□ -0.59
PDLIM7-213ENST00000505074 TMEM144Q7Z5S9 345 aa11.37□□□□□ -0.59
PDLIM7-213ENST00000505074 IGF2BP2-AS1Q96M15 143 aa11.37□□□□□ -0.59
PDLIM7-213ENST00000505074 SLC25A39Q9BZJ4 359 aaPredicted RBP11.37□□□□□ -0.59
PDLIM7-213ENST00000505074 PPP1R14DQ9NXH3 145 aa11.37□□□□□ -0.59
PDLIM7-213ENST00000505074 NACAE9PAV3 2078 aa11.37□□□□□ -0.59
PDLIM7-213ENST00000505074 H3BRN7 92 aa11.36□□□□□ -0.59
PDLIM7-213ENST00000505074 LINC00869P0C866 280 aa11.36□□□□□ -0.59
PDLIM7-213ENST00000505074 TNP2Q05952 138 aa11.36□□□□□ -0.59
PDLIM7-213ENST00000505074 RNF212Q495C1 297 aa11.36□□□□□ -0.59
PDLIM7-213ENST00000505074 C4orf46Q504U0 113 aa11.36□□□□□ -0.59
PDLIM7-213ENST00000505074 LRRC20Q8TCA0 184 aa11.36□□□□□ -0.59
PDLIM7-213ENST00000505074 FAM210BQ96KR6 192 aa11.36□□□□□ -0.59
PDLIM7-213ENST00000505074 SRRQ9GZT4 340 aa11.36□□□□□ -0.59
PDLIM7-213ENST00000505074 FLVCR2Q9UPI3 526 aa11.36□□□□□ -0.59
PDLIM7-213ENST00000505074 NAP1L6A6NFF2 107 aa11.35□□□□□ -0.59
PDLIM7-213ENST00000505074 ZNF705GA8MUZ8 300 aaPredicted RBP11.35□□□□□ -0.59
PDLIM7-213ENST00000505074 HYPMO75409 117 aa11.35□□□□□ -0.59
PDLIM7-213ENST00000505074 NDUFB6O95139 128 aa11.35□□□□□ -0.59
PDLIM7-213ENST00000505074 RPL7P18124 248 aaKnown RBP11.35□□□□□ -0.59
PDLIM7-213ENST00000505074 RHOBP62745 196 aa11.35□□□□□ -0.59
PDLIM7-213ENST00000505074 ID3Q02535 119 aa11.35□□□□□ -0.59
PDLIM7-213ENST00000505074 OR11H7Q8NGC8 314 aa11.35□□□□□ -0.59
PDLIM7-213ENST00000505074 UHRF2Q96PU4 802 aa11.35□□□□□ -0.59
PDLIM7-213ENST00000505074 SHANK2-AS3Q9BTD1 123 aa11.35□□□□□ -0.59
PDLIM7-213ENST00000505074 MGAT4CQ9UBM8 478 aa11.35□□□□□ -0.59
PDLIM7-213ENST00000505074 CENPXA8MT69 81 aa11.34□□□□□ -0.59
PDLIM7-213ENST00000505074 CCNKO75909 580 aa11.34□□□□□ -0.59
PDLIM7-213ENST00000505074 OR4E1P0C645 316 aa11.34□□□□□ -0.59
PDLIM7-213ENST00000505074 METTL15P1P0C7V9 234 aa11.34□□□□□ -0.59
PDLIM7-213ENST00000505074 HIST1H1AQ02539 215 aaPredicted RBP11.34□□□□□ -0.59
PDLIM7-213ENST00000505074 TMEM88Q6PEY1 159 aa11.34□□□□□ -0.59
PDLIM7-213ENST00000505074 AMTNQ6UX39 209 aa11.34□□□□□ -0.59
PDLIM7-213ENST00000505074 S100A7AQ86SG5 101 aa11.34□□□□□ -0.59
PDLIM7-213ENST00000505074 BAP18Q8IXM2 172 aa11.34□□□□□ -0.59
PDLIM7-213ENST00000505074 C17orf77Q96MU5 243 aa11.34□□□□□ -0.59
PDLIM7-213ENST00000505074 ARL6Q9H0F7 186 aa11.34□□□□□ -0.59
PDLIM7-213ENST00000505074 TRAV12-2A0A075B6T6 113 aa11.33□□□□□ -0.6
PDLIM7-213ENST00000505074 TRAV8-2A0A0B4J237 113 aa11.33□□□□□ -0.6
PDLIM7-213ENST00000505074 ANXA7P20073 488 aaKnown RBP11.33□□□□□ -0.6
PDLIM7-213ENST00000505074 SELENOTP62341 195 aa11.33□□□□□ -0.6
PDLIM7-213ENST00000505074 OXA1LQ15070 435 aa11.33□□□□□ -0.6
PDLIM7-213ENST00000505074 BAK1Q16611 211 aa11.33□□□□□ -0.6
PDLIM7-213ENST00000505074 IAH1Q2TAA2 248 aaPredicted RBP11.33□□□□□ -0.6
PDLIM7-213ENST00000505074 OR10P1Q8NGE3 313 aa11.33□□□□□ -0.6
PDLIM7-213ENST00000505074 SMIM8Q96KF7 97 aa11.33□□□□□ -0.6
PDLIM7-213ENST00000505074 GSKIPQ9P0R6 139 aa11.33□□□□□ -0.6
PDLIM7-213ENST00000505074 LRP1BQ9NZR2 4599 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms