RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 PMS2P11Q13670 270 aa18.53■□□□□ 0.56
PVT1-201ENST00000504719 FCN2Q15485 313 aa18.53■□□□□ 0.56
PVT1-201ENST00000504719 ATP6V1FQ16864 119 aa18.53■□□□□ 0.56
PVT1-201ENST00000504719 HIGD1AQ9Y241 93 aa18.53■□□□□ 0.56
PVT1-201ENST00000504719 CXorf65A6NEN9 183 aa18.52■□□□□ 0.56
PVT1-201ENST00000504719 KNCNA6PVL3 124 aa18.52■□□□□ 0.56
PVT1-201ENST00000504719 S100A7P31151 101 aa18.52■□□□□ 0.56
PVT1-201ENST00000504719 CAMLGP49069 296 aa18.52■□□□□ 0.56
PVT1-201ENST00000504719 RAP2BP61225 183 aa18.52■□□□□ 0.56
PVT1-201ENST00000504719 RAB31Q13636 194 aa18.52■□□□□ 0.56
PVT1-201ENST00000504719 OR11H7Q8NGC8 314 aa18.52■□□□□ 0.56
PVT1-201ENST00000504719 OR11H2Q8NH07 326 aa18.52■□□□□ 0.56
PVT1-201ENST00000504719 SLC25A39Q9BZJ4 359 aaPredicted RBP18.52■□□□□ 0.56
PVT1-201ENST00000504719 HYDINQ4G0P3 5121 aa18.51■□□□□ 0.55
PVT1-201ENST00000504719 BAXQ07812 192 aa18.51■□□□□ 0.55
PVT1-201ENST00000504719 OXA1LQ15070 435 aa18.51■□□□□ 0.55
PVT1-201ENST00000504719 OR5C1Q8NGR4 320 aa18.51■□□□□ 0.55
PVT1-201ENST00000504719 SCRT1Q9BWW7 348 aa18.51■□□□□ 0.55
PVT1-201ENST00000504719 SLC25A32Q9H2D1 315 aa18.51■□□□□ 0.55
PVT1-201ENST00000504719 SEPSECSQ9HD40 501 aaKnown RBP18.51■□□□□ 0.55
PVT1-201ENST00000504719 ALMS1Q8TCU4 4167 aa18.5■□□□□ 0.55
PVT1-201ENST00000504719 H3BRN7 92 aa18.5■□□□□ 0.55
PVT1-201ENST00000504719 GIG44P09565 113 aaPredicted RBP18.5■□□□□ 0.55
PVT1-201ENST00000504719 PSMG4Q5JS54 123 aa18.5■□□□□ 0.55
PVT1-201ENST00000504719 PATE2Q6UY27 113 aa18.5■□□□□ 0.55
PVT1-201ENST00000504719 UHRF2Q96PU4 802 aa18.5■□□□□ 0.55
PVT1-201ENST00000504719 MBD2Q9UBB5 411 aa18.5■□□□□ 0.55
PVT1-201ENST00000504719 NUPR2A6NF83 97 aa18.49■□□□□ 0.55
PVT1-201ENST00000504719 SPP1P10451 314 aa18.49■□□□□ 0.55
PVT1-201ENST00000504719 FGF7P21781 194 aa18.49■□□□□ 0.55
PVT1-201ENST00000504719 ACTL10Q5JWF8 245 aa18.49■□□□□ 0.55
PVT1-201ENST00000504719 PXDC1Q5TGL8 231 aa18.49■□□□□ 0.55
PVT1-201ENST00000504719 MORN3Q6PF18 240 aaPredicted RBP18.49■□□□□ 0.55
PVT1-201ENST00000504719 SHANK2-AS3Q9BTD1 123 aa18.49■□□□□ 0.55
PVT1-201ENST00000504719 ARV1Q9H2C2 271 aa18.49■□□□□ 0.55
PVT1-201ENST00000504719 C11orf68Q9H3H3 251 aaKnown RBP18.49■□□□□ 0.55
PVT1-201ENST00000504719 GALR1P47211 349 aa18.48■□□□□ 0.55
PVT1-201ENST00000504719 SNRPD3P62318 126 aaKnown RBP18.48■□□□□ 0.55
PVT1-201ENST00000504719 CLINT1Q14677 625 aa18.48■□□□□ 0.55
PVT1-201ENST00000504719 TMEM41BQ5BJD5 291 aa18.48■□□□□ 0.55
PVT1-201ENST00000504719 CEMP1Q6PRD7 247 aaPredicted RBP18.48■□□□□ 0.55
PVT1-201ENST00000504719 MIC13Q5XKP0 118 aa18.47■□□□□ 0.55
PVT1-201ENST00000504719 S100A7AQ86SG5 101 aa18.47■□□□□ 0.55
PVT1-201ENST00000504719 GPR82Q96P67 336 aa18.47■□□□□ 0.55
PVT1-201ENST00000504719 COX7A2P2O60397 106 aa18.46■□□□□ 0.55
PVT1-201ENST00000504719 C4BPBP20851 252 aa18.46■□□□□ 0.55
PVT1-201ENST00000504719 RPL12P30050 165 aaKnown RBP18.46■□□□□ 0.55
PVT1-201ENST00000504719 PRR20EP86478 221 aa18.46■□□□□ 0.55
PVT1-201ENST00000504719 PRR20CP86479 221 aa18.46■□□□□ 0.55
PVT1-201ENST00000504719 PRR20DP86480 221 aa18.46■□□□□ 0.55
PVT1-201ENST00000504719 PRR20BP86481 221 aa18.46■□□□□ 0.55
PVT1-201ENST00000504719 PRR20AP86496 221 aa18.46■□□□□ 0.55
PVT1-201ENST00000504719 THAP6Q8TBB0 222 aa18.46■□□□□ 0.55
PVT1-201ENST00000504719 RSG1Q9BU20 258 aa18.46■□□□□ 0.55
PVT1-201ENST00000504719 RPL29P47914 159 aaKnown RBP18.45■□□□□ 0.54
PVT1-201ENST00000504719 OPCMLQ14982 345 aa18.45■□□□□ 0.54
PVT1-201ENST00000504719 Q6ZRG5 221 aa18.45■□□□□ 0.54
PVT1-201ENST00000504719 LINC00305Q7Z4B0 112 aa18.45■□□□□ 0.54
PVT1-201ENST00000504719 TMEM37Q8WXS4 190 aa18.45■□□□□ 0.54
PVT1-201ENST00000504719 ELOA3CA0A087WX78 387 aaPredicted RBP18.44■□□□□ 0.54
PVT1-201ENST00000504719 SOCS3O14543 225 aa18.44■□□□□ 0.54
PVT1-201ENST00000504719 MPDU1O75352 247 aa18.44■□□□□ 0.54
PVT1-201ENST00000504719 ID1P41134 155 aa18.44■□□□□ 0.54
PVT1-201ENST00000504719 CHAC2Q8WUX2 184 aa18.44■□□□□ 0.54
PVT1-201ENST00000504719 C17orf77Q96MU5 243 aa18.44■□□□□ 0.54
PVT1-201ENST00000504719 NPCDR1Q9BY65 106 aa18.44■□□□□ 0.54
PVT1-201ENST00000504719 HSPB11Q9Y547 144 aa18.44■□□□□ 0.54
PVT1-201ENST00000504719 RPL7P18124 248 aaKnown RBP18.43■□□□□ 0.54
PVT1-201ENST00000504719 PSMB3P49720 205 aa18.43■□□□□ 0.54
PVT1-201ENST00000504719 MEOX2P50222 304 aa18.43■□□□□ 0.54
PVT1-201ENST00000504719 B2MP61769 119 aa18.43■□□□□ 0.54
PVT1-201ENST00000504719 C10orf113Q5VZT2 155 aa18.43■□□□□ 0.54
PVT1-201ENST00000504719 LINC00052Q96N35 136 aa18.43■□□□□ 0.54
PVT1-201ENST00000504719 DNAJC4Q9NNZ3 241 aa18.43■□□□□ 0.54
PVT1-201ENST00000504719 SLC39A9Q9NUM3 307 aa18.43■□□□□ 0.54
PVT1-201ENST00000504719 PXMP4Q9Y6I8 212 aa18.43■□□□□ 0.54
PVT1-201ENST00000504719 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.42■□□□□ 0.54
PVT1-201ENST00000504719 PHLDA1Q8WV24 401 aaPredicted RBP18.42■□□□□ 0.54
PVT1-201ENST00000504719 ATP5SQ99766 215 aa18.42■□□□□ 0.54
PVT1-201ENST00000504719 RNF24Q9Y225 148 aa18.42■□□□□ 0.54
PVT1-201ENST00000504719 KLK5Q9Y337 293 aaPredicted RBP18.42■□□□□ 0.54
PVT1-201ENST00000504719 H3BMM0 161 aa18.41■□□□□ 0.54
PVT1-201ENST00000504719 ISLRO14498 428 aa18.41■□□□□ 0.54
PVT1-201ENST00000504719 DEFB4AO15263 64 aa18.41■□□□□ 0.54
PVT1-201ENST00000504719 GIPP09681 153 aaPredicted RBP18.41■□□□□ 0.54
PVT1-201ENST00000504719 NANOS2P60321 138 aaKnown RBP18.41■□□□□ 0.54
PVT1-201ENST00000504719 SAMD13Q5VXD3 122 aa18.41■□□□□ 0.54
PVT1-201ENST00000504719 Q8NAQ8 132 aa18.41■□□□□ 0.54
PVT1-201ENST00000504719 CSNK1G2-AS1Q8NCQ2 148 aa18.41■□□□□ 0.54
PVT1-201ENST00000504719 OR1L4Q8NGR5 311 aa18.41■□□□□ 0.54
PVT1-201ENST00000504719 C11orf45Q8TAV5 145 aa18.41■□□□□ 0.54
PVT1-201ENST00000504719 C16orf92Q96LL3 132 aa18.41■□□□□ 0.54
PVT1-201ENST00000504719 SMIM3Q9BZL3 60 aa18.41■□□□□ 0.54
PVT1-201ENST00000504719 ZNF705EA8MWA4 302 aaPredicted RBP18.4■□□□□ 0.54
PVT1-201ENST00000504719 FGL1Q08830 312 aa18.4■□□□□ 0.54
PVT1-201ENST00000504719 MORN5Q5VZ52 161 aa18.4■□□□□ 0.54
PVT1-201ENST00000504719 ASB13Q8WXK3 278 aa18.4■□□□□ 0.54
PVT1-201ENST00000504719 LINC00476Q8WZB0 136 aa18.4■□□□□ 0.54
PVT1-201ENST00000504719 PFDN5Q99471 154 aa18.4■□□□□ 0.54
PVT1-201ENST00000504719 WDR61Q9GZS3 305 aaKnown RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms