RNA–Protein interactions for RNA: ENST00000502299.5

CLDND1-206, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-206ENST00000502299 RNF126Q9BV68 326 aa10.61□□□□□ -0.71
CLDND1-206ENST00000502299 CSTL1Q9H114 145 aa10.61□□□□□ -0.71
CLDND1-206ENST00000502299 ELOA3CA0A087WX78 387 aaPredicted RBP10.6□□□□□ -0.71
CLDND1-206ENST00000502299 H3BRN7 92 aa10.6□□□□□ -0.71
CLDND1-206ENST00000502299 MPDU1O75352 247 aa10.6□□□□□ -0.71
CLDND1-206ENST00000502299 MEOX2P50222 304 aa10.6□□□□□ -0.71
CLDND1-206ENST00000502299 EWSR1Q01844 656 aaKnown RBP eCLIP10.6□□□□□ -0.71
CLDND1-206ENST00000502299 PSMG4Q5JS54 123 aa10.6□□□□□ -0.71
CLDND1-206ENST00000502299 STHQ8IWL8 128 aa10.6□□□□□ -0.71
CLDND1-206ENST00000502299 OR5C1Q8NGR4 320 aa10.6□□□□□ -0.71
CLDND1-206ENST00000502299 CHAC2Q8WUX2 184 aa10.6□□□□□ -0.71
CLDND1-206ENST00000502299 ARV1Q9H2C2 271 aa10.6□□□□□ -0.71
CLDND1-206ENST00000502299 SLC25A32Q9H2D1 315 aa10.6□□□□□ -0.71
CLDND1-206ENST00000502299 RETNQ9HD89 108 aa10.6□□□□□ -0.71
CLDND1-206ENST00000502299 UBE2L5PA0A1B0GUS4 154 aa10.59□□□□□ -0.71
CLDND1-206ENST00000502299 RPL7P18124 248 aaKnown RBP10.59□□□□□ -0.71
CLDND1-206ENST00000502299 CXCL3P19876 107 aa10.59□□□□□ -0.71
CLDND1-206ENST00000502299 RPL29P47914 159 aaKnown RBP10.59□□□□□ -0.71
CLDND1-206ENST00000502299 PATE2Q6UY27 113 aa10.59□□□□□ -0.71
CLDND1-206ENST00000502299 RSG1Q9BU20 258 aa10.59□□□□□ -0.71
CLDND1-206ENST00000502299 SCRT1Q9BWW7 348 aa10.59□□□□□ -0.71
CLDND1-206ENST00000502299 TP53TG1Q9Y2A0 90 aa10.59□□□□□ -0.71
CLDND1-206ENST00000502299 SPRY2O43597 315 aa10.58□□□□□ -0.72
CLDND1-206ENST00000502299 PSMB3P49720 205 aa10.58□□□□□ -0.72
CLDND1-206ENST00000502299 PRR20EP86478 221 aa10.58□□□□□ -0.72
CLDND1-206ENST00000502299 PRR20CP86479 221 aa10.58□□□□□ -0.72
CLDND1-206ENST00000502299 PRR20DP86480 221 aa10.58□□□□□ -0.72
CLDND1-206ENST00000502299 PRR20BP86481 221 aa10.58□□□□□ -0.72
CLDND1-206ENST00000502299 PRR20AP86496 221 aa10.58□□□□□ -0.72
CLDND1-206ENST00000502299 OXA1LQ15070 435 aa10.58□□□□□ -0.72
CLDND1-206ENST00000502299 FCN2Q15485 313 aa10.58□□□□□ -0.72
CLDND1-206ENST00000502299 ACTL10Q5JWF8 245 aa10.58□□□□□ -0.72
CLDND1-206ENST00000502299 LINC00305Q7Z4B0 112 aa10.58□□□□□ -0.72
CLDND1-206ENST00000502299 THAP6Q8TBB0 222 aa10.58□□□□□ -0.72
CLDND1-206ENST00000502299 LINC00052Q96N35 136 aa10.58□□□□□ -0.72
CLDND1-206ENST00000502299 UHRF2Q96PU4 802 aa10.58□□□□□ -0.72
CLDND1-206ENST00000502299 OVOL2Q9BRP0 275 aa10.58□□□□□ -0.72
CLDND1-206ENST00000502299 DNAJC4Q9NNZ3 241 aa10.58□□□□□ -0.72
CLDND1-206ENST00000502299 KNCNA6PVL3 124 aa10.57□□□□□ -0.72
CLDND1-206ENST00000502299 ISLRO14498 428 aa10.57□□□□□ -0.72
CLDND1-206ENST00000502299 SOCS3O14543 225 aa10.57□□□□□ -0.72
CLDND1-206ENST00000502299 COX7A2P2O60397 106 aa10.57□□□□□ -0.72
CLDND1-206ENST00000502299 FGF7P21781 194 aa10.57□□□□□ -0.72
CLDND1-206ENST00000502299 RPL12P30050 165 aaKnown RBP10.57□□□□□ -0.72
CLDND1-206ENST00000502299 C10orf113Q5VZT2 155 aa10.57□□□□□ -0.72
CLDND1-206ENST00000502299 MIC13Q5XKP0 118 aa10.57□□□□□ -0.72
CLDND1-206ENST00000502299 MORN3Q6PF18 240 aaPredicted RBP10.57□□□□□ -0.72
CLDND1-206ENST00000502299 OR11H7Q8NGC8 314 aa10.57□□□□□ -0.72
CLDND1-206ENST00000502299 OR1L4Q8NGR5 311 aa10.57□□□□□ -0.72
CLDND1-206ENST00000502299 ASB13Q8WXK3 278 aa10.57□□□□□ -0.72
CLDND1-206ENST00000502299 TMEM37Q8WXS4 190 aa10.57□□□□□ -0.72
CLDND1-206ENST00000502299 RNF183Q96D59 192 aa10.57□□□□□ -0.72
CLDND1-206ENST00000502299 C16orf92Q96LL3 132 aa10.57□□□□□ -0.72
CLDND1-206ENST00000502299 SLC39A9Q9NUM3 307 aa10.57□□□□□ -0.72
CLDND1-206ENST00000502299 SPP1P10451 314 aa10.56□□□□□ -0.72
CLDND1-206ENST00000502299 ATF4P18848 351 aaPredicted RBP10.56□□□□□ -0.72
CLDND1-206ENST00000502299 B2MP61769 119 aa10.56□□□□□ -0.72
CLDND1-206ENST00000502299 FGL1Q08830 312 aa10.56□□□□□ -0.72
CLDND1-206ENST00000502299 CLINT1Q14677 625 aa10.56□□□□□ -0.72
CLDND1-206ENST00000502299 OPCMLQ14982 345 aa10.56□□□□□ -0.72
CLDND1-206ENST00000502299 DEFB135Q30KP9 77 aa10.56□□□□□ -0.72
CLDND1-206ENST00000502299 TRPT1Q86TN4 253 aaKnown RBP10.56□□□□□ -0.72
CLDND1-206ENST00000502299 PFDN5Q99471 154 aa10.56□□□□□ -0.72
CLDND1-206ENST00000502299 MBD2Q9UBB5 411 aa10.56□□□□□ -0.72
CLDND1-206ENST00000502299 HSPB11Q9Y547 144 aa10.56□□□□□ -0.72
CLDND1-206ENST00000502299 NUTF2P61970 127 aaKnown RBP10.55□□□□□ -0.72
CLDND1-206ENST00000502299 TMEM41BQ5BJD5 291 aa10.55□□□□□ -0.72
CLDND1-206ENST00000502299 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.55□□□□□ -0.72
CLDND1-206ENST00000502299 ZNF709Q8N972 641 aa10.55□□□□□ -0.72
CLDND1-206ENST00000502299 GATAD1Q8WUU5 269 aa10.55□□□□□ -0.72
CLDND1-206ENST00000502299 NPCDR1Q9BY65 106 aa10.55□□□□□ -0.72
CLDND1-206ENST00000502299 PXMP4Q9Y6I8 212 aa10.55□□□□□ -0.72
CLDND1-206ENST00000502299 H3BMM0 161 aa10.54□□□□□ -0.72
CLDND1-206ENST00000502299 CA1P00915 261 aaPredicted RBP10.54□□□□□ -0.72
CLDND1-206ENST00000502299 SPATA31B1PQ5VZV4 182 aa10.54□□□□□ -0.72
CLDND1-206ENST00000502299 EBLN2Q6P2I7 272 aa10.54□□□□□ -0.72
CLDND1-206ENST00000502299 BPIFA4PQ86YQ2 179 aa10.54□□□□□ -0.72
CLDND1-206ENST00000502299 LRRC20Q8TCA0 184 aa10.54□□□□□ -0.72
CLDND1-206ENST00000502299 C17orf77Q96MU5 243 aa10.54□□□□□ -0.72
CLDND1-206ENST00000502299 ATP5SQ99766 215 aa10.54□□□□□ -0.72
CLDND1-206ENST00000502299 WDR61Q9GZS3 305 aaKnown RBP10.54□□□□□ -0.72
CLDND1-206ENST00000502299 SAV1Q9H4B6 383 aaPredicted RBP10.54□□□□□ -0.72
CLDND1-206ENST00000502299 RPRMQ9NS64 109 aa10.54□□□□□ -0.72
CLDND1-206ENST00000502299 A0A087X0K7 114 aa10.53□□□□□ -0.72
CLDND1-206ENST00000502299 C17orf112F2Z3M2 114 aa10.53□□□□□ -0.72
CLDND1-206ENST00000502299 IFNA5P01569 189 aa10.53□□□□□ -0.72
CLDND1-206ENST00000502299 GIPP09681 153 aaPredicted RBP10.53□□□□□ -0.72
CLDND1-206ENST00000502299 HLA-DRB4P13762 266 aa10.53□□□□□ -0.72
CLDND1-206ENST00000502299 FOXI2Q6ZQN5 318 aa10.53□□□□□ -0.72
CLDND1-206ENST00000502299 SCGB1C1Q8TD33 95 aa10.53□□□□□ -0.72
CLDND1-206ENST00000502299 KCNIP2Q9NS61 270 aa10.53□□□□□ -0.72
CLDND1-206ENST00000502299 HLA-DRB4X5D2U9 266 aa10.53□□□□□ -0.72
CLDND1-206ENST00000502299 PLECQ15149 4684 aaKnown RBP10.52□□□□□ -0.72
CLDND1-206ENST00000502299 MRPS12O15235 138 aaKnown RBP10.52□□□□□ -0.73
CLDND1-206ENST00000502299 IL17DQ8TAD2 202 aa10.52□□□□□ -0.73
CLDND1-206ENST00000502299 CLUHP3Q96NS8 147 aa10.52□□□□□ -0.73
CLDND1-206ENST00000502299 RARRES2Q99969 163 aa10.52□□□□□ -0.73
CLDND1-206ENST00000502299 KRTAP17-1Q9BYP8 105 aa10.52□□□□□ -0.73
CLDND1-206ENST00000502299 SMIM3Q9BZL3 60 aa10.52□□□□□ -0.73
CLDND1-206ENST00000502299 TRAV8-2A0A0B4J237 113 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 673.7 ms