RNA–Protein interactions for RNA: ENST00000497977.1

PTPRN-218, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 3

Gene PTPRN, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-218ENST00000497977 APRG1Q8IVJ8 170 aa7.72□□□□□ -1.17
PTPRN-218ENST00000497977 TCTE3Q8IZS6 198 aa7.72□□□□□ -1.17
PTPRN-218ENST00000497977 OR11H4Q8NGC9 324 aa7.72□□□□□ -1.17
PTPRN-218ENST00000497977 LRRC20Q8TCA0 184 aa7.72□□□□□ -1.17
PTPRN-218ENST00000497977 AQP10Q96PS8 301 aa7.72□□□□□ -1.17
PTPRN-218ENST00000497977 MGST2Q99735 147 aa7.72□□□□□ -1.17
PTPRN-218ENST00000497977 MFFQ9GZY8 342 aa7.72□□□□□ -1.17
PTPRN-218ENST00000497977 HIGD1AQ9Y241 93 aa7.72□□□□□ -1.17
PTPRN-218ENST00000497977 ZNF98A6NK75 572 aa7.71□□□□□ -1.18
PTPRN-218ENST00000497977 AGPAT2O15120 278 aa7.71□□□□□ -1.18
PTPRN-218ENST00000497977 IFNA5P01569 189 aa7.71□□□□□ -1.18
PTPRN-218ENST00000497977 OR5G3P0C626 314 aa7.71□□□□□ -1.18
PTPRN-218ENST00000497977 RPL35AP18077 110 aaKnown RBP7.71□□□□□ -1.18
PTPRN-218ENST00000497977 RPL7P18124 248 aaKnown RBP7.71□□□□□ -1.18
PTPRN-218ENST00000497977 CAMLGP49069 296 aa7.71□□□□□ -1.18
PTPRN-218ENST00000497977 PLP1P60201 277 aa7.71□□□□□ -1.18
PTPRN-218ENST00000497977 ZFP69Q49AA0 526 aa7.71□□□□□ -1.18
PTPRN-218ENST00000497977 EBLN2Q6P2I7 272 aa7.71□□□□□ -1.18
PTPRN-218ENST00000497977 ZNF709Q8N972 641 aa7.71□□□□□ -1.18
PTPRN-218ENST00000497977 OR1L4Q8NGR5 311 aa7.71□□□□□ -1.18
PTPRN-218ENST00000497977 MUC7Q8TAX7 377 aa7.71□□□□□ -1.18
PTPRN-218ENST00000497977 GLMPQ8WWB7 406 aa7.71□□□□□ -1.18
PTPRN-218ENST00000497977 WFDC1Q9HC57 220 aa7.71□□□□□ -1.18
PTPRN-218ENST00000497977 WDR83OSQ9Y284 106 aa7.71□□□□□ -1.18
PTPRN-218ENST00000497977 ISLRO14498 428 aa7.7□□□□□ -1.18
PTPRN-218ENST00000497977 PFDN1O60925 122 aa7.7□□□□□ -1.18
PTPRN-218ENST00000497977 ZNF688P0C7X2 276 aa7.7□□□□□ -1.18
PTPRN-218ENST00000497977 PSMB3P49720 205 aa7.7□□□□□ -1.18
PTPRN-218ENST00000497977 VWC2Q2TAL6 325 aa7.7□□□□□ -1.18
PTPRN-218ENST00000497977 PSMG4Q5JS54 123 aa7.7□□□□□ -1.18
PTPRN-218ENST00000497977 MIC13Q5XKP0 118 aa7.7□□□□□ -1.18
PTPRN-218ENST00000497977 TMEM182Q6ZP80 229 aaPredicted RBP7.7□□□□□ -1.18
PTPRN-218ENST00000497977 HSD17B11Q8NBQ5 300 aa7.7□□□□□ -1.18
PTPRN-218ENST00000497977 SCGB1C1Q8TD33 95 aa7.7□□□□□ -1.18
PTPRN-218ENST00000497977 DCANP1Q8TF63 244 aa7.7□□□□□ -1.18
PTPRN-218ENST00000497977 RNF183Q96D59 192 aa7.7□□□□□ -1.18
PTPRN-218ENST00000497977 C16orf92Q96LL3 132 aa7.7□□□□□ -1.18
PTPRN-218ENST00000497977 LINC00052Q96N35 136 aa7.7□□□□□ -1.18
PTPRN-218ENST00000497977 PFDN5Q99471 154 aa7.7□□□□□ -1.18
PTPRN-218ENST00000497977 RSG1Q9BU20 258 aa7.7□□□□□ -1.18
PTPRN-218ENST00000497977 NPCDR1Q9BY65 106 aa7.7□□□□□ -1.18
PTPRN-218ENST00000497977 ARL6Q9H0F7 186 aa7.7□□□□□ -1.18
PTPRN-218ENST00000497977 WFDC10AQ9H1F0 79 aa7.7□□□□□ -1.18
PTPRN-218ENST00000497977 SLC25A22Q9H936 323 aa7.7□□□□□ -1.18
PTPRN-218ENST00000497977 DNAJC4Q9NNZ3 241 aa7.7□□□□□ -1.18
PTPRN-218ENST00000497977 RPRMQ9NS64 109 aa7.7□□□□□ -1.18
PTPRN-218ENST00000497977 CLEC5AQ9NY25 188 aa7.7□□□□□ -1.18
PTPRN-218ENST00000497977 PXMP4Q9Y6I8 212 aa7.7□□□□□ -1.18
PTPRN-218ENST00000497977 KANTRA0A1W2PQU2 76 aa7.69□□□□□ -1.18
PTPRN-218ENST00000497977 COX7A2P2O60397 106 aa7.69□□□□□ -1.18
PTPRN-218ENST00000497977 C1QBP02746 253 aa7.69□□□□□ -1.18
PTPRN-218ENST00000497977 ATF4P18848 351 aaPredicted RBP7.69□□□□□ -1.18
PTPRN-218ENST00000497977 CXCL2P19875 107 aa7.69□□□□□ -1.18
PTPRN-218ENST00000497977 NKX2-5P52952 324 aaPredicted RBP7.69□□□□□ -1.18
PTPRN-218ENST00000497977 ZNF266Q14584 549 aa7.69□□□□□ -1.18
PTPRN-218ENST00000497977 OPCMLQ14982 345 aa7.69□□□□□ -1.18
PTPRN-218ENST00000497977 LEMD1Q68G75 181 aa7.69□□□□□ -1.18
PTPRN-218ENST00000497977 BPIFA4PQ86YQ2 179 aa7.69□□□□□ -1.18
PTPRN-218ENST00000497977 RARRES2Q99969 163 aa7.69□□□□□ -1.18
PTPRN-218ENST00000497977 WDR61Q9GZS3 305 aaKnown RBP7.69□□□□□ -1.18
PTPRN-218ENST00000497977 KCNIP2Q9NS61 270 aa7.69□□□□□ -1.18
PTPRN-218ENST00000497977 C17orf112F2Z3M2 114 aa7.68□□□□□ -1.18
PTPRN-218ENST00000497977 BCL2L11O43521 198 aa7.68□□□□□ -1.18
PTPRN-218ENST00000497977 DUSP14O95147 198 aaKnown RBP7.68□□□□□ -1.18
PTPRN-218ENST00000497977 CA1P00915 261 aaPredicted RBP7.68□□□□□ -1.18
PTPRN-218ENST00000497977 B2MP61769 119 aa7.68□□□□□ -1.18
PTPRN-218ENST00000497977 ZNF345Q14585 488 aa7.68□□□□□ -1.18
PTPRN-218ENST00000497977 ACTL10Q5JWF8 245 aa7.68□□□□□ -1.18
PTPRN-218ENST00000497977 RPL7L1Q6DKI1 246 aaKnown RBP7.68□□□□□ -1.18
PTPRN-218ENST00000497977 UHRF2Q96PU4 802 aa7.68□□□□□ -1.18
PTPRN-218ENST00000497977 ARPC5LQ9BPX5 153 aa7.68□□□□□ -1.18
PTPRN-218ENST00000497977 SCRT1Q9BWW7 348 aa7.68□□□□□ -1.18
PTPRN-218ENST00000497977 SLC25A39Q9BZJ4 359 aaPredicted RBP7.68□□□□□ -1.18
PTPRN-218ENST00000497977 SH3BGRL3Q9H299 93 aa7.68□□□□□ -1.18
PTPRN-218ENST00000497977 RFNGQ9Y644 331 aa7.68□□□□□ -1.18
PTPRN-218ENST00000497977 BORCS7-ASMTA0A0B4J1R7 106 aa7.67□□□□□ -1.18
PTPRN-218ENST00000497977 BOLA2-SMG1P6H3BVE0 249 aa7.67□□□□□ -1.18
PTPRN-218ENST00000497977 RPL29P47914 159 aaKnown RBP7.67□□□□□ -1.18
PTPRN-218ENST00000497977 GUK1Q16774 197 aa7.67□□□□□ -1.18
PTPRN-218ENST00000497977 GCSAMLQ5JQS6 135 aa7.67□□□□□ -1.18
PTPRN-218ENST00000497977 FFAR4Q5NUL3 377 aa7.67□□□□□ -1.18
PTPRN-218ENST00000497977 C10orf113Q5VZT2 155 aa7.67□□□□□ -1.18
PTPRN-218ENST00000497977 KCNRGQ8N5I3 272 aa7.67□□□□□ -1.18
PTPRN-218ENST00000497977 OVOL2Q9BRP0 275 aa7.67□□□□□ -1.18
PTPRN-218ENST00000497977 SHANK2-AS3Q9BTD1 123 aa7.67□□□□□ -1.18
PTPRN-218ENST00000497977 ZNF471Q9BX82 626 aaPredicted RBP7.67□□□□□ -1.18
PTPRN-218ENST00000497977 ARV1Q9H2C2 271 aa7.67□□□□□ -1.18
PTPRN-218ENST00000497977 SLC39A9Q9NUM3 307 aa7.67□□□□□ -1.18
PTPRN-218ENST00000497977 PPP1R14DQ9NXH3 145 aa7.67□□□□□ -1.18
PTPRN-218ENST00000497977 DNAH3Q8TD57 4116 aa7.67□□□□□ -1.18
PTPRN-218ENST00000497977 HMSDA8MTL9 139 aa7.66□□□□□ -1.18
PTPRN-218ENST00000497977 AMBPP02760 352 aa7.66□□□□□ -1.18
PTPRN-218ENST00000497977 DEFB135Q30KP9 77 aa7.66□□□□□ -1.18
PTPRN-218ENST00000497977 FOXI2Q6ZQN5 318 aa7.66□□□□□ -1.18
PTPRN-218ENST00000497977 TMUB2Q71RG4 321 aa7.66□□□□□ -1.18
PTPRN-218ENST00000497977 LINC00305Q7Z4B0 112 aa7.66□□□□□ -1.18
PTPRN-218ENST00000497977 HYLS1Q96M11 299 aa7.66□□□□□ -1.18
PTPRN-218ENST00000497977 CLUHP3Q96NS8 147 aa7.66□□□□□ -1.18
PTPRN-218ENST00000497977 EDA2RQ9HAV5 297 aa7.66□□□□□ -1.18
PTPRN-218ENST00000497977 A0A0D9SG52 128 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms