RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 NBDYA0A0U1RRE5 68 aa6.79□□□□□ -1.32
UBR4-216ENST00000494503 MED6O75586 246 aa6.79□□□□□ -1.32
UBR4-216ENST00000494503 CFDP00746 253 aaPredicted RBP6.79□□□□□ -1.32
UBR4-216ENST00000494503 FAUP35544 74 aaKnown RBP6.79□□□□□ -1.32
UBR4-216ENST00000494503 ATP5IP56385 69 aaPredicted RBP6.79□□□□□ -1.32
UBR4-216ENST00000494503 FAM3BP58499 235 aaPredicted RBP6.79□□□□□ -1.32
UBR4-216ENST00000494503 RAP2BP61225 183 aa6.79□□□□□ -1.32
UBR4-216ENST00000494503 SPCS2Q15005 226 aa6.79□□□□□ -1.32
UBR4-216ENST00000494503 SPANXN5Q5MJ07 72 aa6.79□□□□□ -1.32
UBR4-216ENST00000494503 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.79□□□□□ -1.32
UBR4-216ENST00000494503 PKD1P98161 4303 aa6.78□□□□□ -1.32
UBR4-216ENST00000494503 IGKV1OR2-108A0A075B7D4 117 aa6.78□□□□□ -1.32
UBR4-216ENST00000494503 PIGBOS1A0A0B4J2F0 54 aa6.78□□□□□ -1.32
UBR4-216ENST00000494503 ANKRD20A5PA0PJZ0 165 aa6.78□□□□□ -1.32
UBR4-216ENST00000494503 BOLA2-SMG1P6H3BVE0 249 aa6.78□□□□□ -1.32
UBR4-216ENST00000494503 NOL3O60936 208 aaKnown RBP6.78□□□□□ -1.32
UBR4-216ENST00000494503 IL5P05113 134 aa6.78□□□□□ -1.32
UBR4-216ENST00000494503 ATP5G1P05496 136 aa6.78□□□□□ -1.32
UBR4-216ENST00000494503 HOXB5P09067 269 aa6.78□□□□□ -1.32
UBR4-216ENST00000494503 OR5G3P0C626 314 aa6.78□□□□□ -1.32
UBR4-216ENST00000494503 ATP5G3P48201 142 aa6.78□□□□□ -1.32
UBR4-216ENST00000494503 ALDH3B2P48448 385 aa6.78□□□□□ -1.32
UBR4-216ENST00000494503 OR5I1Q13606 314 aa6.78□□□□□ -1.32
UBR4-216ENST00000494503 THAP8Q8NA92 274 aa6.78□□□□□ -1.32
UBR4-216ENST00000494503 GPR82Q96P67 336 aa6.78□□□□□ -1.32
UBR4-216ENST00000494503 CIB3Q96Q77 187 aaPredicted RBP6.78□□□□□ -1.32
UBR4-216ENST00000494503 RSL24D1Q9UHA3 163 aaKnown RBP6.78□□□□□ -1.32
UBR4-216ENST00000494503 DNAH17Q9UFH2 4485 aa6.78□□□□□ -1.32
UBR4-216ENST00000494503 DNAH11Q96DT5 4516 aa6.77□□□□□ -1.33
UBR4-216ENST00000494503 ABCA13Q86UQ4 5058 aa6.77□□□□□ -1.33
UBR4-216ENST00000494503 CTDSPLO15194 276 aa6.77□□□□□ -1.33
UBR4-216ENST00000494503 SYNGR2O43760 224 aa6.77□□□□□ -1.33
UBR4-216ENST00000494503 SMIM18P0DKX4 95 aa6.77□□□□□ -1.33
UBR4-216ENST00000494503 ANXA7P20073 488 aaKnown RBP6.77□□□□□ -1.33
UBR4-216ENST00000494503 AZU1P20160 251 aa6.77□□□□□ -1.33
UBR4-216ENST00000494503 B2MP61769 119 aa6.77□□□□□ -1.33
UBR4-216ENST00000494503 DLK1P80370 383 aa6.77□□□□□ -1.33
UBR4-216ENST00000494503 AMTNQ6UX39 209 aa6.77□□□□□ -1.33
UBR4-216ENST00000494503 ACOT7LQ6ZUV0 252 aa6.77□□□□□ -1.33
UBR4-216ENST00000494503 SSX7Q7RTT5 188 aa6.77□□□□□ -1.33
UBR4-216ENST00000494503 SPATA12Q7Z6I5 190 aa6.77□□□□□ -1.33
UBR4-216ENST00000494503 RABL2AQ9UBK7 228 aaPredicted RBP6.77□□□□□ -1.33
UBR4-216ENST00000494503 RABL2BQ9UNT1 228 aa6.77□□□□□ -1.33
UBR4-216ENST00000494503 HIGD1AQ9Y241 93 aa6.77□□□□□ -1.33
UBR4-216ENST00000494503 A0A0J9YY99 117 aa6.76□□□□□ -1.33
UBR4-216ENST00000494503 DUXBA0A1W2PPF3 345 aa6.76□□□□□ -1.33
UBR4-216ENST00000494503 FABP12A6NFH5 140 aa6.76□□□□□ -1.33
UBR4-216ENST00000494503 J3KRW8 73 aa6.76□□□□□ -1.33
UBR4-216ENST00000494503 CRXO43186 299 aaPredicted RBP6.76□□□□□ -1.33
UBR4-216ENST00000494503 LINC00869P0C866 280 aa6.76□□□□□ -1.33
UBR4-216ENST00000494503 RPL7P18124 248 aaKnown RBP6.76□□□□□ -1.33
UBR4-216ENST00000494503 RRAS2P62070 204 aaPredicted RBP6.76□□□□□ -1.33
UBR4-216ENST00000494503 PYDC2Q56P42 97 aa6.76□□□□□ -1.33
UBR4-216ENST00000494503 TMEM128Q5BJH2 165 aa6.76□□□□□ -1.33
UBR4-216ENST00000494503 TMEM182Q6ZP80 229 aaPredicted RBP6.76□□□□□ -1.33
UBR4-216ENST00000494503 TMEM144Q7Z5S9 345 aa6.76□□□□□ -1.33
UBR4-216ENST00000494503 OR4D5Q8NGN0 318 aa6.76□□□□□ -1.33
UBR4-216ENST00000494503 ZNRF2Q8NHG8 242 aa6.76□□□□□ -1.33
UBR4-216ENST00000494503 MCFD2Q8NI22 146 aa6.76□□□□□ -1.33
UBR4-216ENST00000494503 RNF141Q8WVD5 230 aa6.76□□□□□ -1.33
UBR4-216ENST00000494503 C16orf74Q96GX8 76 aa6.76□□□□□ -1.33
UBR4-216ENST00000494503 UHRF2Q96PU4 802 aa6.76□□□□□ -1.33
UBR4-216ENST00000494503 MRPS26Q9BYN8 205 aaKnown RBP6.76□□□□□ -1.33
UBR4-216ENST00000494503 NOP10Q9NPE3 64 aaKnown RBP6.76□□□□□ -1.33
UBR4-216ENST00000494503 SLC45A2Q9UMX9 530 aa6.76□□□□□ -1.33
UBR4-216ENST00000494503 STRAPQ9Y3F4 350 aaKnown RBP6.76□□□□□ -1.33
UBR4-216ENST00000494503 LINC00588Q9Y4M8 146 aa6.76□□□□□ -1.33
UBR4-216ENST00000494503 TIMM8BQ9Y5J9 83 aaPredicted RBP6.76□□□□□ -1.33
UBR4-216ENST00000494503 TRAV8-2A0A0B4J237 113 aa6.75□□□□□ -1.33
UBR4-216ENST00000494503 CBY3A6NI87 242 aa6.75□□□□□ -1.33
UBR4-216ENST00000494503 H3BRN7 92 aa6.75□□□□□ -1.33
UBR4-216ENST00000494503 HYPMO75409 117 aa6.75□□□□□ -1.33
UBR4-216ENST00000494503 CDK2AP2O75956 126 aa6.75□□□□□ -1.33
UBR4-216ENST00000494503 SNRPCP09234 159 aaKnown RBP6.75□□□□□ -1.33
UBR4-216ENST00000494503 TAS2R60P59551 318 aa6.75□□□□□ -1.33
UBR4-216ENST00000494503 AP3S2P59780 193 aa6.75□□□□□ -1.33
UBR4-216ENST00000494503 CYP2G1PQ6ZSU1 146 aa6.75□□□□□ -1.33
UBR4-216ENST00000494503 CCDC190Q86UF4 302 aa6.75□□□□□ -1.33
UBR4-216ENST00000494503 TMEM256Q8N2U0 113 aa6.75□□□□□ -1.33
UBR4-216ENST00000494503 TOMM5Q8N4H5 51 aa6.75□□□□□ -1.33
UBR4-216ENST00000494503 OR8A1Q8NGG7 326 aa6.75□□□□□ -1.33
UBR4-216ENST00000494503 GNPNAT1Q96EK6 184 aaPredicted RBP6.75□□□□□ -1.33
UBR4-216ENST00000494503 CCDC59Q9P031 241 aaKnown RBP6.75□□□□□ -1.33
UBR4-216ENST00000494503 DYNC1H1Q14204 4646 aaKnown RBP6.75□□□□□ -1.33
UBR4-216ENST00000494503 TRAV26-1A0A087WT03 109 aa6.74□□□□□ -1.33
UBR4-216ENST00000494503 SSSCA1O60232 199 aa6.74□□□□□ -1.33
UBR4-216ENST00000494503 PITX3O75364 302 aa6.74□□□□□ -1.33
UBR4-216ENST00000494503 SCGB1D2O95969 90 aa6.74□□□□□ -1.33
UBR4-216ENST00000494503 TSPOP30536 169 aa6.74□□□□□ -1.33
UBR4-216ENST00000494503 PPP1R1AQ13522 171 aa6.74□□□□□ -1.33
UBR4-216ENST00000494503 TTC32Q5I0X7 151 aa6.74□□□□□ -1.33
UBR4-216ENST00000494503 S100A7AQ86SG5 101 aa6.74□□□□□ -1.33
UBR4-216ENST00000494503 CCDC28AQ8IWP9 274 aa6.74□□□□□ -1.33
UBR4-216ENST00000494503 OR10J6PQ8NGY7 276 aa6.74□□□□□ -1.33
UBR4-216ENST00000494503 RAB2BQ8WUD1 216 aa6.74□□□□□ -1.33
UBR4-216ENST00000494503 RPUSD4Q96CM3 377 aaKnown RBP6.74□□□□□ -1.33
UBR4-216ENST00000494503 SHANK2-AS3Q9BTD1 123 aa6.74□□□□□ -1.33
UBR4-216ENST00000494503 ARL6Q9H0F7 186 aa6.74□□□□□ -1.33
UBR4-216ENST00000494503 Q9H8V8 135 aa6.74□□□□□ -1.33
UBR4-216ENST00000494503 SCRT2Q9NQ03 307 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms