RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 LAMTOR1Q6IAA8 161 aa5.01□□□□□ -1.61
VPS52-219ENST00000493379 BTNL8Q6UX41 500 aa5.01□□□□□ -1.61
VPS52-219ENST00000493379 Q6ZNX1 250 aa5.01□□□□□ -1.61
VPS52-219ENST00000493379 TMEM182Q6ZP80 229 aaPredicted RBP5.01□□□□□ -1.61
VPS52-219ENST00000493379 ACOT7LQ6ZUV0 252 aa5.01□□□□□ -1.61
VPS52-219ENST00000493379 OR11H7Q8NGC8 314 aa5.01□□□□□ -1.61
VPS52-219ENST00000493379 RNF125Q96EQ8 232 aa5.01□□□□□ -1.61
VPS52-219ENST00000493379 ACY3Q96HD9 319 aa5.01□□□□□ -1.61
VPS52-219ENST00000493379 RNF2Q99496 336 aa5.01□□□□□ -1.61
VPS52-219ENST00000493379 NEURL2Q9BR09 285 aa5.01□□□□□ -1.61
VPS52-219ENST00000493379 C20orf24Q9BUV8 137 aa5.01□□□□□ -1.61
VPS52-219ENST00000493379 WDR83OSQ9Y284 106 aa5.01□□□□□ -1.61
VPS52-219ENST00000493379 LSM5Q9Y4Y9 91 aaKnown RBP5.01□□□□□ -1.61
VPS52-219ENST00000493379 IGSF23A1L1A6 192 aa5□□□□□ -1.61
VPS52-219ENST00000493379 ZFP92A6NM28 416 aa5□□□□□ -1.61
VPS52-219ENST00000493379 L7N2F9 121 aa5□□□□□ -1.61
VPS52-219ENST00000493379 SSNA1O43805 119 aa5□□□□□ -1.61
VPS52-219ENST00000493379 MPDU1O75352 247 aa5□□□□□ -1.61
VPS52-219ENST00000493379 YIF1AO95070 293 aa5□□□□□ -1.61
VPS52-219ENST00000493379 IL4P05112 153 aa5□□□□□ -1.61
VPS52-219ENST00000493379 GIPP09681 153 aaPredicted RBP5□□□□□ -1.61
VPS52-219ENST00000493379 NPSP0C0P6 89 aa5□□□□□ -1.61
VPS52-219ENST00000493379 LINC00869P0C866 280 aa5□□□□□ -1.61
VPS52-219ENST00000493379 NUP62P37198 522 aaPredicted RBP5□□□□□ -1.61
VPS52-219ENST00000493379 EIF2B2P49770 351 aaKnown RBP5□□□□□ -1.61
VPS52-219ENST00000493379 AP2S1P53680 142 aaPredicted RBP5□□□□□ -1.61
VPS52-219ENST00000493379 FCN2Q15485 313 aa5□□□□□ -1.61
VPS52-219ENST00000493379 ZNF503Q96F45 646 aa5□□□□□ -1.61
VPS52-219ENST00000493379 METTL26Q96S19 204 aa5□□□□□ -1.61
VPS52-219ENST00000493379 PARD6GQ9BYG4 376 aaPredicted RBP5□□□□□ -1.61
VPS52-219ENST00000493379 SLC25A31Q9H0C2 315 aa5□□□□□ -1.61
VPS52-219ENST00000493379 MED28Q9H204 178 aa5□□□□□ -1.61
VPS52-219ENST00000493379 OR5AC2Q9NZP5 309 aa5□□□□□ -1.61
VPS52-219ENST00000493379 SMAD5-AS1Q9Y6J3 95 aa5□□□□□ -1.61
VPS52-219ENST00000493379 DMBT1Q9UGM3 2413 aaPredicted RBP4.99□□□□□ -1.61
VPS52-219ENST00000493379 IGHV3OR16-8A0A075B7F1 116 aa4.99□□□□□ -1.61
VPS52-219ENST00000493379 K7EQG2 157 aa4.99□□□□□ -1.61
VPS52-219ENST00000493379 AGPAT2O15120 278 aa4.99□□□□□ -1.61
VPS52-219ENST00000493379 DFFBO76075 338 aa4.99□□□□□ -1.61
VPS52-219ENST00000493379 CST7O76096 145 aa4.99□□□□□ -1.61
VPS52-219ENST00000493379 CD7P09564 240 aa4.99□□□□□ -1.61
VPS52-219ENST00000493379 NHLRC4P0CG21 123 aaPredicted RBP4.99□□□□□ -1.61
VPS52-219ENST00000493379 PET100P0DJ07 73 aa4.99□□□□□ -1.61
VPS52-219ENST00000493379 IGHV4-30-4P0DP06 118 aa4.99□□□□□ -1.61
VPS52-219ENST00000493379 RPL29P47914 159 aaKnown RBP4.99□□□□□ -1.61
VPS52-219ENST00000493379 CAV2P51636 162 aa4.99□□□□□ -1.61
VPS52-219ENST00000493379 HBG1P69891 147 aa4.99□□□□□ -1.61
VPS52-219ENST00000493379 HBG2P69892 147 aa4.99□□□□□ -1.61
VPS52-219ENST00000493379 EWSR1Q01844 656 aaKnown RBP eCLIP4.99□□□□□ -1.61
VPS52-219ENST00000493379 FGL1Q08830 312 aa4.99□□□□□ -1.61
VPS52-219ENST00000493379 SLC38A11Q08AI6 406 aa4.99□□□□□ -1.61
VPS52-219ENST00000493379 CFAP161Q6P656 301 aa4.99□□□□□ -1.61
VPS52-219ENST00000493379 PATE2Q6UY27 113 aa4.99□□□□□ -1.61
VPS52-219ENST00000493379 RBPMS2Q6ZRY4 209 aaKnown RBP4.99□□□□□ -1.61
VPS52-219ENST00000493379 CYP2G1PQ6ZSU1 146 aa4.99□□□□□ -1.61
VPS52-219ENST00000493379 BPIFCQ8NFQ6 507 aa4.99□□□□□ -1.61
VPS52-219ENST00000493379 DYNLRB2Q8TF09 96 aa4.99□□□□□ -1.61
VPS52-219ENST00000493379 DCANP1Q8TF63 244 aa4.99□□□□□ -1.61
VPS52-219ENST00000493379 GRAMD2BQ96HH9 432 aa4.99□□□□□ -1.61
VPS52-219ENST00000493379 C17orf77Q96MU5 243 aa4.99□□□□□ -1.61
VPS52-219ENST00000493379 TMEM147Q9BVK8 224 aa4.99□□□□□ -1.61
VPS52-219ENST00000493379 TMEM231Q9H6L2 316 aa4.99□□□□□ -1.61
VPS52-219ENST00000493379 UQCC1Q9NVA1 299 aa4.99□□□□□ -1.61
VPS52-219ENST00000493379 RABAC1Q9UI14 185 aa4.99□□□□□ -1.61
VPS52-219ENST00000493379 KMT2AQ03164 3969 aa4.98□□□□□ -1.61
VPS52-219ENST00000493379 HELTA6NFD8 242 aa4.98□□□□□ -1.61
VPS52-219ENST00000493379 OR4C46A6NHA9 309 aa4.98□□□□□ -1.61
VPS52-219ENST00000493379 ZNF98A6NK75 572 aa4.98□□□□□ -1.61
VPS52-219ENST00000493379 G3V3Q6 166 aa4.98□□□□□ -1.61
VPS52-219ENST00000493379 ZNF207O43670 478 aaKnown RBP4.98□□□□□ -1.61
VPS52-219ENST00000493379 S100A7P31151 101 aa4.98□□□□□ -1.61
VPS52-219ENST00000493379 BCAP31P51572 246 aa4.98□□□□□ -1.61
VPS52-219ENST00000493379 S100A10P60903 97 aa4.98□□□□□ -1.61
VPS52-219ENST00000493379 PAFAH1B2P68402 229 aa4.98□□□□□ -1.61
VPS52-219ENST00000493379 ODF3L2Q3SX64 289 aa4.98□□□□□ -1.61
VPS52-219ENST00000493379 Q5BKY6 102 aa4.98□□□□□ -1.61
VPS52-219ENST00000493379 TCF24Q7RTU0 167 aa4.98□□□□□ -1.61
VPS52-219ENST00000493379 GTSCR1Q86UQ5 136 aa4.98□□□□□ -1.61
VPS52-219ENST00000493379 STX12Q86Y82 276 aa4.98□□□□□ -1.61
VPS52-219ENST00000493379 TMEM37Q8WXS4 190 aa4.98□□□□□ -1.61
VPS52-219ENST00000493379 LINC00476Q8WZB0 136 aa4.98□□□□□ -1.61
VPS52-219ENST00000493379 NARS2Q96I59 477 aaKnown RBP4.98□□□□□ -1.61
VPS52-219ENST00000493379 GPR82Q96P67 336 aa4.98□□□□□ -1.61
VPS52-219ENST00000493379 AQP10Q96PS8 301 aa4.98□□□□□ -1.61
VPS52-219ENST00000493379 MGST2Q99735 147 aa4.98□□□□□ -1.61
VPS52-219ENST00000493379 ASCL2Q99929 193 aa4.98□□□□□ -1.61
VPS52-219ENST00000493379 MS4A6AQ9H2W1 248 aa4.98□□□□□ -1.61
VPS52-219ENST00000493379 FBXL17Q9UF56 701 aa4.98□□□□□ -1.61
VPS52-219ENST00000493379 PAIP2BQ9ULR5 123 aaKnown RBP4.98□□□□□ -1.61
VPS52-219ENST00000493379 RNF24Q9Y225 148 aa4.98□□□□□ -1.61
VPS52-219ENST00000493379 HSPB11Q9Y547 144 aa4.98□□□□□ -1.61
VPS52-219ENST00000493379 PKHD1P08F94 4074 aa4.97□□□□□ -1.61
VPS52-219ENST00000493379 OR11H12B2RN74 326 aa4.97□□□□□ -1.61
VPS52-219ENST00000493379 H3BRN7 92 aa4.97□□□□□ -1.61
VPS52-219ENST00000493379 SOCS3O14543 225 aa4.97□□□□□ -1.61
VPS52-219ENST00000493379 MRPS12O15235 138 aaKnown RBP4.97□□□□□ -1.61
VPS52-219ENST00000493379 HYPMO75409 117 aa4.97□□□□□ -1.61
VPS52-219ENST00000493379 FRMD6-AS1P0C7T7 363 aa4.97□□□□□ -1.61
VPS52-219ENST00000493379 GATA2P23769 480 aaPredicted RBP4.97□□□□□ -1.61
VPS52-219ENST00000493379 RPL12P30050 165 aaKnown RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms