RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 FAM74A1Q5RGS3 127 aa10.17□□□□□ -0.78
MSH6-208ENST00000493177 SPATA31B1PQ5VZV4 182 aa10.17□□□□□ -0.78
MSH6-208ENST00000493177 LEMD1Q68G75 181 aa10.17□□□□□ -0.78
MSH6-208ENST00000493177 MIR17HGQ75NE6 70 aa10.17□□□□□ -0.78
MSH6-208ENST00000493177 FAM213BQ8TBF2 198 aa10.17□□□□□ -0.78
MSH6-208ENST00000493177 MARC2Q969Z3 335 aa10.17□□□□□ -0.78
MSH6-208ENST00000493177 SHANK2-AS3Q9BTD1 123 aa10.17□□□□□ -0.78
MSH6-208ENST00000493177 RHPN1-AS1Q9BWJ2 59 aa10.17□□□□□ -0.78
MSH6-208ENST00000493177 MRPL32Q9BYC8 188 aaKnown RBP10.17□□□□□ -0.78
MSH6-208ENST00000493177 ACTR3CQ9C0K3 210 aaPredicted RBP10.17□□□□□ -0.78
MSH6-208ENST00000493177 RPRMQ9NS64 109 aa10.17□□□□□ -0.78
MSH6-208ENST00000493177 FUT9Q9Y231 359 aa10.17□□□□□ -0.78
MSH6-208ENST00000493177 SELENOKQ9Y6D0 94 aa10.17□□□□□ -0.78
MSH6-208ENST00000493177 TRAV5A0A0B4J249 113 aa10.16□□□□□ -0.78
MSH6-208ENST00000493177 ZNF98A6NK75 572 aa10.16□□□□□ -0.78
MSH6-208ENST00000493177 EIF3GO75821 320 aaKnown RBP eCLIP10.16□□□□□ -0.78
MSH6-208ENST00000493177 CBLN1P23435 193 aa10.16□□□□□ -0.78
MSH6-208ENST00000493177 OR8I2Q8N0Y5 310 aa10.16□□□□□ -0.78
MSH6-208ENST00000493177 SEPSECSQ9HD40 501 aaKnown RBP10.16□□□□□ -0.78
MSH6-208ENST00000493177 PLA2G2EQ9NZK7 142 aa10.16□□□□□ -0.78
MSH6-208ENST00000493177 RNF24Q9Y225 148 aa10.16□□□□□ -0.78
MSH6-208ENST00000493177 CHEK1O14757 476 aa10.15□□□□□ -0.78
MSH6-208ENST00000493177 HMGB3O15347 200 aaKnown RBP10.15□□□□□ -0.78
MSH6-208ENST00000493177 BUB3O43684 328 aa10.15□□□□□ -0.78
MSH6-208ENST00000493177 IFNA7P01567 189 aa10.15□□□□□ -0.78
MSH6-208ENST00000493177 SULT1A2P50226 295 aa10.15□□□□□ -0.78
MSH6-208ENST00000493177 RAB5CP51148 216 aa10.15□□□□□ -0.78
MSH6-208ENST00000493177 TAS2R45P59539 299 aa10.15□□□□□ -0.78
MSH6-208ENST00000493177 MORN5Q5VZ52 161 aa10.15□□□□□ -0.78
MSH6-208ENST00000493177 TEX261Q6UWH6 196 aa10.15□□□□□ -0.78
MSH6-208ENST00000493177 RPP25LQ8N5L8 163 aaKnown RBP10.15□□□□□ -0.78
MSH6-208ENST00000493177 TECRQ9NZ01 308 aaKnown RBP10.15□□□□□ -0.78
MSH6-208ENST00000493177 U3KQE9 123 aa10.15□□□□□ -0.78
MSH6-208ENST00000493177 CTXND1A0A1B0GTU2 59 aa10.14□□□□□ -0.79
MSH6-208ENST00000493177 C8orf88P0DMB2 117 aa10.14□□□□□ -0.79
MSH6-208ENST00000493177 FHITP49789 147 aa10.14□□□□□ -0.79
MSH6-208ENST00000493177 RPL11P62913 178 aaKnown RBP10.14□□□□□ -0.79
MSH6-208ENST00000493177 C16orf54Q6UWD8 224 aa10.14□□□□□ -0.79
MSH6-208ENST00000493177 LCN15Q6UWW0 184 aa10.14□□□□□ -0.79
MSH6-208ENST00000493177 DPPA3Q6W0C5 159 aa10.14□□□□□ -0.79
MSH6-208ENST00000493177 IL34Q6ZMJ4 242 aa10.14□□□□□ -0.79
MSH6-208ENST00000493177 RNF141Q8WVD5 230 aa10.14□□□□□ -0.79
MSH6-208ENST00000493177 RAB24Q969Q5 203 aa10.14□□□□□ -0.79
MSH6-208ENST00000493177 B9D2Q9BPU9 175 aa10.14□□□□□ -0.79
MSH6-208ENST00000493177 UBQLN2Q9UHD9 624 aa10.14□□□□□ -0.79
MSH6-208ENST00000493177 PRKDCP78527 4128 aaKnown RBP10.13□□□□□ -0.79
MSH6-208ENST00000493177 IGKV3-7A0A075B6H7 116 aa10.13□□□□□ -0.79
MSH6-208ENST00000493177 ZNF705EA8MWA4 302 aaPredicted RBP10.13□□□□□ -0.79
MSH6-208ENST00000493177 OR7C2O60412 319 aa10.13□□□□□ -0.79
MSH6-208ENST00000493177 RPL7P18124 248 aaKnown RBP10.13□□□□□ -0.79
MSH6-208ENST00000493177 ATF4P18848 351 aaPredicted RBP10.13□□□□□ -0.79
MSH6-208ENST00000493177 GALR1P47211 349 aa10.13□□□□□ -0.79
MSH6-208ENST00000493177 KHDC3LQ587J8 217 aa10.13□□□□□ -0.79
MSH6-208ENST00000493177 C1orf194Q5T5A4 169 aa10.13□□□□□ -0.79
MSH6-208ENST00000493177 SIGLEC15Q6ZMC9 328 aa10.13□□□□□ -0.79
MSH6-208ENST00000493177 ADAMTSL5Q6ZMM2 481 aa10.13□□□□□ -0.79
MSH6-208ENST00000493177 TCF24Q7RTU0 167 aa10.13□□□□□ -0.79
MSH6-208ENST00000493177 BPIFA4PQ86YQ2 179 aa10.13□□□□□ -0.79
MSH6-208ENST00000493177 IQCF2Q8IXL9 164 aa10.13□□□□□ -0.79
MSH6-208ENST00000493177 ZNF680Q8NEM1 530 aa10.13□□□□□ -0.79
MSH6-208ENST00000493177 SLC25A2Q9BXI2 301 aa10.13□□□□□ -0.79
MSH6-208ENST00000493177 MLXQ9UH92 298 aa10.13□□□□□ -0.79
MSH6-208ENST00000493177 A0A1B0GV50 99 aa10.12□□□□□ -0.79
MSH6-208ENST00000493177 MAP1LC3B2A6NCE7 125 aa10.12□□□□□ -0.79
MSH6-208ENST00000493177 HELTA6NFD8 242 aa10.12□□□□□ -0.79
MSH6-208ENST00000493177 ZNF785A8K8V0 405 aa10.12□□□□□ -0.79
MSH6-208ENST00000493177 ZNF726P1Q15940 193 aa10.12□□□□□ -0.79
MSH6-208ENST00000493177 RBPMS2Q6ZRY4 209 aaKnown RBP10.12□□□□□ -0.79
MSH6-208ENST00000493177 SSX7Q7RTT5 188 aa10.12□□□□□ -0.79
MSH6-208ENST00000493177 GLMPQ8WWB7 406 aa10.12□□□□□ -0.79
MSH6-208ENST00000493177 GPR82Q96P67 336 aa10.12□□□□□ -0.79
MSH6-208ENST00000493177 PAXXQ9BUH6 204 aa10.12□□□□□ -0.79
MSH6-208ENST00000493177 MAP1LC3BQ9GZQ8 125 aa10.12□□□□□ -0.79
MSH6-208ENST00000493177 OR51M1Q9H341 326 aa10.12□□□□□ -0.79
MSH6-208ENST00000493177 SIGLEC8Q9NYZ4 499 aa10.12□□□□□ -0.79
MSH6-208ENST00000493177 SNRPCP09234 159 aaKnown RBP10.11□□□□□ -0.79
MSH6-208ENST00000493177 H2AFB1P0C5Y9 115 aa10.11□□□□□ -0.79
MSH6-208ENST00000493177 STAG3L2P0CL84 134 aa10.11□□□□□ -0.79
MSH6-208ENST00000493177 STAG3L3P0CL85 134 aa10.11□□□□□ -0.79
MSH6-208ENST00000493177 PYYP10082 97 aa10.11□□□□□ -0.79
MSH6-208ENST00000493177 GP9P14770 177 aa10.11□□□□□ -0.79
MSH6-208ENST00000493177 FGF8P55075 233 aaPredicted RBP10.11□□□□□ -0.79
MSH6-208ENST00000493177 DEFB114Q30KQ6 69 aa10.11□□□□□ -0.79
MSH6-208ENST00000493177 STXBP6Q8NFX7 210 aa10.11□□□□□ -0.79
MSH6-208ENST00000493177 SFT2D1Q8WV19 159 aa10.11□□□□□ -0.79
MSH6-208ENST00000493177 FAM167A-AS1Q96KT0 104 aa10.11□□□□□ -0.79
MSH6-208ENST00000493177 SMAD5-AS1Q9Y6J3 95 aa10.11□□□□□ -0.79
MSH6-208ENST00000493177 DNAH3Q8TD57 4116 aa10.1□□□□□ -0.79
MSH6-208ENST00000493177 CXorf1O96002 111 aa10.1□□□□□ -0.79
MSH6-208ENST00000493177 CD5P06127 495 aa10.1□□□□□ -0.79
MSH6-208ENST00000493177 OR10J4P0C629 311 aa10.1□□□□□ -0.79
MSH6-208ENST00000493177 ARL14EPLP0DKL9 152 aa10.1□□□□□ -0.79
MSH6-208ENST00000493177 TFPI2P48307 235 aa10.1□□□□□ -0.79
MSH6-208ENST00000493177 UBE2L3P68036 154 aaKnown RBP10.1□□□□□ -0.79
MSH6-208ENST00000493177 BLOC1S1P78537 153 aa10.1□□□□□ -0.79
MSH6-208ENST00000493177 CD300EQ496F6 205 aaPredicted RBP10.1□□□□□ -0.79
MSH6-208ENST00000493177 PQLC2Q6ZP29 291 aa10.1□□□□□ -0.79
MSH6-208ENST00000493177 WFDC3Q8IUB2 231 aa10.1□□□□□ -0.79
MSH6-208ENST00000493177 GBGT1Q8N5D6 347 aa10.1□□□□□ -0.79
MSH6-208ENST00000493177 LRRC20Q8TCA0 184 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms