RNA–Protein interactions for RNA: ENST00000492512.1

GPNMB-213, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-213ENST00000492512 TRAV26-1A0A087WT03 109 aa9.49□□□□□ -0.89
GPNMB-213ENST00000492512 GPX4P36969 197 aaPredicted RBP9.49□□□□□ -0.89
GPNMB-213ENST00000492512 XGP55808 180 aa9.49□□□□□ -0.89
GPNMB-213ENST00000492512 TMEM256Q8N2U0 113 aa9.49□□□□□ -0.89
GPNMB-213ENST00000492512 OR10J6PQ8NGY7 276 aa9.49□□□□□ -0.89
GPNMB-213ENST00000492512 OR52I2Q8NH67 350 aa9.49□□□□□ -0.89
GPNMB-213ENST00000492512 MCFD2Q8NI22 146 aa9.49□□□□□ -0.89
GPNMB-213ENST00000492512 RXFP4Q8TDU9 374 aa9.49□□□□□ -0.89
GPNMB-213ENST00000492512 DTD1Q8TEA8 209 aa9.49□□□□□ -0.89
GPNMB-213ENST00000492512 SLC25A39Q9BZJ4 359 aaPredicted RBP9.49□□□□□ -0.89
GPNMB-213ENST00000492512 MTFP1Q9UDX5 166 aa9.49□□□□□ -0.89
GPNMB-213ENST00000492512 FAM25AB3EWG3 89 aa9.48□□□□□ -0.89
GPNMB-213ENST00000492512 FAM25CB3EWG5 89 aa9.48□□□□□ -0.89
GPNMB-213ENST00000492512 FAM25GB3EWG6 89 aa9.48□□□□□ -0.89
GPNMB-213ENST00000492512 BOLA2-SMG1P6H3BVE0 249 aa9.48□□□□□ -0.89
GPNMB-213ENST00000492512 EREGO14944 169 aa9.48□□□□□ -0.89
GPNMB-213ENST00000492512 RAB3DO95716 219 aa9.48□□□□□ -0.89
GPNMB-213ENST00000492512 M6PRP20645 277 aa9.48□□□□□ -0.89
GPNMB-213ENST00000492512 LINC00315P59091 139 aa9.48□□□□□ -0.89
GPNMB-213ENST00000492512 TAS2R60P59551 318 aa9.48□□□□□ -0.89
GPNMB-213ENST00000492512 ESRGQ1W209 222 aa9.48□□□□□ -0.89
GPNMB-213ENST00000492512 IGFL4Q6B9Z1 124 aa9.48□□□□□ -0.89
GPNMB-213ENST00000492512 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.48□□□□□ -0.89
GPNMB-213ENST00000492512 TMEM144Q7Z5S9 345 aa9.48□□□□□ -0.89
GPNMB-213ENST00000492512 ZNF503Q96F45 646 aa9.48□□□□□ -0.89
GPNMB-213ENST00000492512 C17orf77Q96MU5 243 aa9.48□□□□□ -0.89
GPNMB-213ENST00000492512 TRGV9Q99603 122 aa9.48□□□□□ -0.89
GPNMB-213ENST00000492512 RTBDNQ9BSG5 229 aaPredicted RBP9.48□□□□□ -0.89
GPNMB-213ENST00000492512 SLIRPQ9GZT3 109 aaKnown RBP9.48□□□□□ -0.89
GPNMB-213ENST00000492512 RBKSQ9H477 322 aa9.48□□□□□ -0.89
GPNMB-213ENST00000492512 NOP10Q9NPE3 64 aaKnown RBP9.48□□□□□ -0.89
GPNMB-213ENST00000492512 MRPS16Q9Y3D3 137 aaKnown RBP9.48□□□□□ -0.89
GPNMB-213ENST00000492512 A0A0J9YY99 117 aa9.47□□□□□ -0.89
GPNMB-213ENST00000492512 ZNF98A6NK75 572 aa9.47□□□□□ -0.89
GPNMB-213ENST00000492512 FUSP35637 526 aaKnown RBP eCLIP9.47□□□□□ -0.89
GPNMB-213ENST00000492512 ATP5IP56385 69 aaPredicted RBP9.47□□□□□ -0.89
GPNMB-213ENST00000492512 TAS2R19P59542 299 aa9.47□□□□□ -0.89
GPNMB-213ENST00000492512 RHOBP62745 196 aa9.47□□□□□ -0.89
GPNMB-213ENST00000492512 FGL1Q08830 312 aa9.47□□□□□ -0.89
GPNMB-213ENST00000492512 STEAP1BQ6NZ63 245 aa9.47□□□□□ -0.89
GPNMB-213ENST00000492512 RNF182Q8N6D2 247 aa9.47□□□□□ -0.89
GPNMB-213ENST00000492512 TMEM229BQ8NBD8 167 aa9.47□□□□□ -0.89
GPNMB-213ENST00000492512 ZNF738Q8NE65 137 aa9.47□□□□□ -0.89
GPNMB-213ENST00000492512 OR4D5Q8NGN0 318 aa9.47□□□□□ -0.89
GPNMB-213ENST00000492512 OR1B1Q8NGR6 318 aa9.47□□□□□ -0.89
GPNMB-213ENST00000492512 GPR82Q96P67 336 aa9.47□□□□□ -0.89
GPNMB-213ENST00000492512 PPP1R14DQ9NXH3 145 aa9.47□□□□□ -0.89
GPNMB-213ENST00000492512 HSPB7Q9UBY9 170 aa9.47□□□□□ -0.89
GPNMB-213ENST00000492512 TMEM56-RWDD3S4R434 201 aa9.47□□□□□ -0.89
GPNMB-213ENST00000492512 VPS13BQ7Z7G8 4022 aa9.47□□□□□ -0.89
GPNMB-213ENST00000492512 CRYM-AS1A6NIL9 109 aa9.46□□□□□ -0.9
GPNMB-213ENST00000492512 ADAP1O75689 374 aa9.46□□□□□ -0.9
GPNMB-213ENST00000492512 CFDP00746 253 aaPredicted RBP9.46□□□□□ -0.9
GPNMB-213ENST00000492512 S100A5P33763 92 aa9.46□□□□□ -0.9
GPNMB-213ENST00000492512 CCR6P51684 374 aa9.46□□□□□ -0.9
GPNMB-213ENST00000492512 GGNBP1Q5YKI7 109 aa9.46□□□□□ -0.9
GPNMB-213ENST00000492512 CDPF1Q6NVV7 123 aa9.46□□□□□ -0.9
GPNMB-213ENST00000492512 ZNF493Q6ZR52 646 aa9.46□□□□□ -0.9
GPNMB-213ENST00000492512 SLC45A2Q9UMX9 530 aa9.46□□□□□ -0.9
GPNMB-213ENST00000492512 IGKV1OR2-108A0A075B7D4 117 aa9.45□□□□□ -0.9
GPNMB-213ENST00000492512 TRAV8-2A0A0B4J237 113 aa9.45□□□□□ -0.9
GPNMB-213ENST00000492512 ERVFC1-1P60608 527 aa9.45□□□□□ -0.9
GPNMB-213ENST00000492512 HIST1H1AQ02539 215 aaPredicted RBP9.45□□□□□ -0.9
GPNMB-213ENST00000492512 SMCO1Q147U7 214 aa9.45□□□□□ -0.9
GPNMB-213ENST00000492512 FAAP20Q6NZ36 180 aa9.45□□□□□ -0.9
GPNMB-213ENST00000492512 THAP8Q8NA92 274 aa9.45□□□□□ -0.9
GPNMB-213ENST00000492512 RNASE8Q8TDE3 154 aaKnown RBP9.45□□□□□ -0.9
GPNMB-213ENST00000492512 TMEM263Q8WUH6 116 aaKnown RBP9.45□□□□□ -0.9
GPNMB-213ENST00000492512 IL22RA2Q969J5 263 aa9.45□□□□□ -0.9
GPNMB-213ENST00000492512 C18orf15Q96N68 181 aa9.45□□□□□ -0.9
GPNMB-213ENST00000492512 IFNA5P01569 189 aa9.44□□□□□ -0.9
GPNMB-213ENST00000492512 ORM2P19652 201 aa9.44□□□□□ -0.9
GPNMB-213ENST00000492512 HOXA5P20719 270 aa9.44□□□□□ -0.9
GPNMB-213ENST00000492512 S100A7P31151 101 aa9.44□□□□□ -0.9
GPNMB-213ENST00000492512 RAB11AP62491 216 aa9.44□□□□□ -0.9
GPNMB-213ENST00000492512 SURF2Q15527 256 aaPredicted RBP9.44□□□□□ -0.9
GPNMB-213ENST00000492512 MZT2AQ6P582 158 aa9.44□□□□□ -0.9
GPNMB-213ENST00000492512 Q6ZRN7 208 aaPredicted RBP9.44□□□□□ -0.9
GPNMB-213ENST00000492512 TMEM147Q9BVK8 224 aa9.44□□□□□ -0.9
GPNMB-213ENST00000492512 PRR13Q9NZ81 148 aa9.44□□□□□ -0.9
GPNMB-213ENST00000492512 EXTL2Q9UBQ6 330 aa9.44□□□□□ -0.9
GPNMB-213ENST00000492512 KCNIP3Q9Y2W7 256 aa9.44□□□□□ -0.9
GPNMB-213ENST00000492512 GAGE12BA1L429 117 aa9.43□□□□□ -0.9
GPNMB-213ENST00000492512 DISC1C4P0D8 188 aa9.43□□□□□ -0.9
GPNMB-213ENST00000492512 H3BNG1 76 aa9.43□□□□□ -0.9
GPNMB-213ENST00000492512 GAGE7O76087 117 aa9.43□□□□□ -0.9
GPNMB-213ENST00000492512 GAGE12FP0CL80 117 aa9.43□□□□□ -0.9
GPNMB-213ENST00000492512 GAGE12GP0CL81 117 aa9.43□□□□□ -0.9
GPNMB-213ENST00000492512 GAGE12IP0CL82 117 aa9.43□□□□□ -0.9
GPNMB-213ENST00000492512 BPIFCQ8NFQ6 507 aa9.43□□□□□ -0.9
GPNMB-213ENST00000492512 OR8A1Q8NGG7 326 aa9.43□□□□□ -0.9
GPNMB-213ENST00000492512 OR1S1Q8NH92 325 aa9.43□□□□□ -0.9
GPNMB-213ENST00000492512 AP3S1Q92572 193 aa9.43□□□□□ -0.9
GPNMB-213ENST00000492512 MDFICQ9P1T7 246 aa9.43□□□□□ -0.9
GPNMB-213ENST00000492512 PAIP2BQ9ULR5 123 aaKnown RBP9.43□□□□□ -0.9
GPNMB-213ENST00000492512 GPR132Q9UNW8 380 aa9.43□□□□□ -0.9
GPNMB-213ENST00000492512 H7BYZ3 331 aa9.42□□□□□ -0.9
GPNMB-213ENST00000492512 SMR3BP02814 79 aaPredicted RBP9.42□□□□□ -0.9
GPNMB-213ENST00000492512 RLN2P04090 185 aa9.42□□□□□ -0.9
GPNMB-213ENST00000492512 AKR1C4P17516 323 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms