RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 SAXO1Q8IYX7 474 aa3.65□□□□□ -1.83
RTN4-215ENST00000491592 TCTEX1D1Q8N7M0 179 aa3.65□□□□□ -1.83
RTN4-215ENST00000491592 SIGLECL1Q8N7X8 197 aa3.65□□□□□ -1.83
RTN4-215ENST00000491592 ZNRF1Q8ND25 227 aa3.65□□□□□ -1.83
RTN4-215ENST00000491592 CCL4L1Q8NHW4 92 aa3.65□□□□□ -1.83
RTN4-215ENST00000491592 MRPL30Q8TCC3 161 aaKnown RBP3.65□□□□□ -1.83
RTN4-215ENST00000491592 TAF15Q92804 592 aaKnown RBP eCLIP3.65□□□□□ -1.83
RTN4-215ENST00000491592 BORCS8Q96FH0 119 aa3.65□□□□□ -1.83
RTN4-215ENST00000491592 FAM218AQ96MZ4 157 aa3.65□□□□□ -1.83
RTN4-215ENST00000491592 CIB3Q96Q77 187 aaPredicted RBP3.65□□□□□ -1.83
RTN4-215ENST00000491592 HDHD3Q9BSH5 251 aaPredicted RBP3.65□□□□□ -1.83
RTN4-215ENST00000491592 GNB1LQ9BYB4 327 aa3.65□□□□□ -1.83
RTN4-215ENST00000491592 WDR61Q9GZS3 305 aaKnown RBP3.65□□□□□ -1.83
RTN4-215ENST00000491592 OR2D2Q9H210 308 aa3.65□□□□□ -1.83
RTN4-215ENST00000491592 PARLQ9H300 379 aa3.65□□□□□ -1.83
RTN4-215ENST00000491592 KCNIP2Q9NS61 270 aa3.65□□□□□ -1.83
RTN4-215ENST00000491592 ZNF586Q9NXT0 402 aa3.65□□□□□ -1.83
RTN4-215ENST00000491592 BET1LQ9NYM9 111 aa3.65□□□□□ -1.83
RTN4-215ENST00000491592 PSENENQ9NZ42 101 aa3.65□□□□□ -1.83
RTN4-215ENST00000491592 RARRES3Q9UL19 164 aa3.65□□□□□ -1.83
RTN4-215ENST00000491592 MRPS16Q9Y3D3 137 aaKnown RBP3.65□□□□□ -1.83
RTN4-215ENST00000491592 RFNGQ9Y644 331 aa3.65□□□□□ -1.83
RTN4-215ENST00000491592 LY96Q9Y6Y9 160 aa3.65□□□□□ -1.83
RTN4-215ENST00000491592 TDRD6O60522 2096 aaKnown RBP3.65□□□□□ -1.83
RTN4-215ENST00000491592 LRP4O75096 1905 aa3.65□□□□□ -1.83
RTN4-215ENST00000491592 KIAA2026Q5HYC2 2103 aa3.65□□□□□ -1.83
RTN4-215ENST00000491592 PDE4DIPQ5VU43 2346 aa3.65□□□□□ -1.83
RTN4-215ENST00000491592 THADAQ6YHU6 1953 aa3.64□□□□□ -1.83
RTN4-215ENST00000491592 TRBV6-6A0A0A6YYG2 114 aa3.64□□□□□ -1.83
RTN4-215ENST00000491592 TRAV26-2A0A0B4J265 109 aa3.64□□□□□ -1.83
RTN4-215ENST00000491592 MDFIC2A0A1B0GVS7 189 aa3.64□□□□□ -1.83
RTN4-215ENST00000491592 A0A1B0GX78 115 aa3.64□□□□□ -1.83
RTN4-215ENST00000491592 PGPA6NDG6 321 aa3.64□□□□□ -1.83
RTN4-215ENST00000491592 SHISA9B4DS77 424 aa3.64□□□□□ -1.83
RTN4-215ENST00000491592 K7ENP7 123 aa3.64□□□□□ -1.83
RTN4-215ENST00000491592 M0R135 149 aa3.64□□□□□ -1.83
RTN4-215ENST00000491592 CORTO00230 105 aa3.64□□□□□ -1.83
RTN4-215ENST00000491592 TRAF3IP2O43734 574 aaPredicted RBP3.64□□□□□ -1.83
RTN4-215ENST00000491592 MT-ND6P03923 174 aa3.64□□□□□ -1.83
RTN4-215ENST00000491592 FGF6P10767 208 aa3.64□□□□□ -1.83
RTN4-215ENST00000491592 CRISP2P16562 243 aa3.64□□□□□ -1.83
RTN4-215ENST00000491592 CNTFRP26992 372 aa3.64□□□□□ -1.83
RTN4-215ENST00000491592 G6PCP35575 357 aa3.64□□□□□ -1.83
RTN4-215ENST00000491592 RBM11P57052 281 aaKnown RBP3.64□□□□□ -1.83
RTN4-215ENST00000491592 GNB2P62879 340 aa3.64□□□□□ -1.83
RTN4-215ENST00000491592 CACNG7P62955 275 aa3.64□□□□□ -1.83
RTN4-215ENST00000491592 PSG9Q00887 426 aa3.64□□□□□ -1.83
RTN4-215ENST00000491592 DEFB110Q30KQ9 67 aa3.64□□□□□ -1.83
RTN4-215ENST00000491592 CENPWQ5EE01 88 aa3.64□□□□□ -1.83
RTN4-215ENST00000491592 IBA57Q5T440 356 aaKnown RBP3.64□□□□□ -1.83
RTN4-215ENST00000491592 LINC00596Q86U02 117 aa3.64□□□□□ -1.83
RTN4-215ENST00000491592 C1orf174Q8IYL3 243 aa3.64□□□□□ -1.83
RTN4-215ENST00000491592 ZNF709Q8N972 641 aa3.64□□□□□ -1.83
RTN4-215ENST00000491592 ZNF799Q96GE5 643 aa3.64□□□□□ -1.83
RTN4-215ENST00000491592 OR4C12Q96R67 309 aa3.64□□□□□ -1.83
RTN4-215ENST00000491592 TMEM147Q9BVK8 224 aa3.64□□□□□ -1.83
RTN4-215ENST00000491592 IFI27L2Q9H2X8 130 aa3.64□□□□□ -1.83
RTN4-215ENST00000491592 MRPL16Q9NX20 251 aaKnown RBP3.64□□□□□ -1.83
RTN4-215ENST00000491592 TAAR3PQ9P1P4 343 aa3.64□□□□□ -1.83
RTN4-215ENST00000491592 XCL2Q9UBD3 114 aa3.64□□□□□ -1.83
RTN4-215ENST00000491592 NAT8BQ9UHF3 227 aa3.64□□□□□ -1.83
RTN4-215ENST00000491592 LAMTOR2Q9Y2Q5 125 aa3.64□□□□□ -1.83
RTN4-215ENST00000491592 EXPH5Q8NEV8 1989 aa3.63□□□□□ -1.83
RTN4-215ENST00000491592 IGHV3OR16-13A0A075B7E8 117 aa3.63□□□□□ -1.83
RTN4-215ENST00000491592 TRAV30A0A087WSZ9 112 aa3.63□□□□□ -1.83
RTN4-215ENST00000491592 IGKV1D-13A0A0B4J2D9 117 aa3.63□□□□□ -1.83
RTN4-215ENST00000491592 PLAC8L1A1L4L8 177 aa3.63□□□□□ -1.83
RTN4-215ENST00000491592 KNCNA6PVL3 124 aa3.63□□□□□ -1.83
RTN4-215ENST00000491592 C17orf112F2Z3M2 114 aa3.63□□□□□ -1.83
RTN4-215ENST00000491592 ANGPTL7O43827 346 aa3.63□□□□□ -1.83
RTN4-215ENST00000491592 GNG7O60262 68 aa3.63□□□□□ -1.83
RTN4-215ENST00000491592 PGLYRP1O75594 196 aaPredicted RBP3.63□□□□□ -1.83
RTN4-215ENST00000491592 NAPSAO96009 420 aa3.63□□□□□ -1.83
RTN4-215ENST00000491592 CT45A10P0DMU9 189 aa3.63□□□□□ -1.83
RTN4-215ENST00000491592 IGKV1-13P0DP09 117 aa3.63□□□□□ -1.83
RTN4-215ENST00000491592 PSG2P11465 335 aa3.63□□□□□ -1.83
RTN4-215ENST00000491592 LHX2P50458 406 aa3.63□□□□□ -1.83
RTN4-215ENST00000491592 PRR3P79522 188 aaKnown RBP3.63□□□□□ -1.83
RTN4-215ENST00000491592 SLC38A11Q08AI6 406 aa3.63□□□□□ -1.83
RTN4-215ENST00000491592 PMCHL1Q16048 86 aa3.63□□□□□ -1.83
RTN4-215ENST00000491592 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.63□□□□□ -1.83
RTN4-215ENST00000491592 FAM27BQ5VT28 67 aa3.63□□□□□ -1.83
RTN4-215ENST00000491592 IGFL2Q6UWQ7 119 aa3.63□□□□□ -1.83
RTN4-215ENST00000491592 TMEM14EPQ6UXP3 125 aa3.63□□□□□ -1.83
RTN4-215ENST00000491592 ZNF818PQ6ZRF7 136 aa3.63□□□□□ -1.83
RTN4-215ENST00000491592 Q6ZSR6 202 aa3.63□□□□□ -1.83
RTN4-215ENST00000491592 Q6ZTC4 211 aa3.63□□□□□ -1.83
RTN4-215ENST00000491592 BAGE3Q86Y29 109 aa3.63□□□□□ -1.83
RTN4-215ENST00000491592 BAGE2Q86Y30 109 aa3.63□□□□□ -1.83
RTN4-215ENST00000491592 TMEM256Q8N2U0 113 aa3.63□□□□□ -1.83
RTN4-215ENST00000491592 RPP25LQ8N5L8 163 aaKnown RBP3.63□□□□□ -1.83
RTN4-215ENST00000491592 ANKRD29Q8N6D5 301 aa3.63□□□□□ -1.83
RTN4-215ENST00000491592 ZNF491Q8N8L2 437 aa3.63□□□□□ -1.83
RTN4-215ENST00000491592 OR10J6PQ8NGY7 276 aa3.63□□□□□ -1.83
RTN4-215ENST00000491592 SGMS2Q8NHU3 365 aa3.63□□□□□ -1.83
RTN4-215ENST00000491592 VN1R17PQ8TDU5 208 aa3.63□□□□□ -1.83
RTN4-215ENST00000491592 C11orf52Q96A22 123 aa3.63□□□□□ -1.83
RTN4-215ENST00000491592 STARD4Q96DR4 205 aa3.63□□□□□ -1.83
RTN4-215ENST00000491592 SAMD10Q9BYL1 202 aa3.63□□□□□ -1.83
RTN4-215ENST00000491592 IL36BQ9NZH7 164 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms