RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 MEOX2P50222 304 aa10.87□□□□□ -0.67
COL2A1-207ENST00000490609 SRPXP78539 464 aa10.87□□□□□ -0.67
COL2A1-207ENST00000490609 TMEM128Q5BJH2 165 aa10.87□□□□□ -0.67
COL2A1-207ENST00000490609 GGNBP1Q5YKI7 109 aa10.87□□□□□ -0.67
COL2A1-207ENST00000490609 MRPS26Q9BYN8 205 aaKnown RBP10.87□□□□□ -0.67
COL2A1-207ENST00000490609 RSL24D1Q9UHA3 163 aaKnown RBP10.87□□□□□ -0.67
COL2A1-207ENST00000490609 NBDYA0A0U1RRE5 68 aa10.86□□□□□ -0.67
COL2A1-207ENST00000490609 LYRM9A8MSI8 78 aa10.86□□□□□ -0.67
COL2A1-207ENST00000490609 H3BRN7 92 aa10.86□□□□□ -0.67
COL2A1-207ENST00000490609 SYNGR2O43760 224 aa10.86□□□□□ -0.67
COL2A1-207ENST00000490609 ORM2P19652 201 aa10.86□□□□□ -0.67
COL2A1-207ENST00000490609 TSPOP30536 169 aa10.86□□□□□ -0.67
COL2A1-207ENST00000490609 FAM3BP58499 235 aaPredicted RBP10.86□□□□□ -0.67
COL2A1-207ENST00000490609 RAB11AP62491 216 aa10.86□□□□□ -0.67
COL2A1-207ENST00000490609 C15orf53Q8NAA6 179 aa10.86□□□□□ -0.67
COL2A1-207ENST00000490609 OR1B1Q8NGR6 318 aa10.86□□□□□ -0.67
COL2A1-207ENST00000490609 SLC25A39Q9BZJ4 359 aaPredicted RBP10.86□□□□□ -0.67
COL2A1-207ENST00000490609 LINC00588Q9Y4M8 146 aa10.86□□□□□ -0.67
COL2A1-207ENST00000490609 FABP12A6NFH5 140 aa10.85□□□□□ -0.67
COL2A1-207ENST00000490609 WRBO00258 174 aa10.85□□□□□ -0.67
COL2A1-207ENST00000490609 MRPS12O15235 138 aaKnown RBP10.85□□□□□ -0.67
COL2A1-207ENST00000490609 CFDP00746 253 aaPredicted RBP10.85□□□□□ -0.67
COL2A1-207ENST00000490609 DEFB130BP0DP73 79 aa10.85□□□□□ -0.67
COL2A1-207ENST00000490609 DEFB130AP0DP74 79 aa10.85□□□□□ -0.67
COL2A1-207ENST00000490609 ANXA3P12429 323 aa10.85□□□□□ -0.67
COL2A1-207ENST00000490609 PPP1R1AQ13522 171 aa10.85□□□□□ -0.67
COL2A1-207ENST00000490609 SAMD13Q5VXD3 122 aa10.85□□□□□ -0.67
COL2A1-207ENST00000490609 PATE2Q6UY27 113 aa10.85□□□□□ -0.67
COL2A1-207ENST00000490609 TMED4Q7Z7H5 227 aa10.85□□□□□ -0.67
COL2A1-207ENST00000490609 PAIP2BQ9ULR5 123 aaKnown RBP10.85□□□□□ -0.67
COL2A1-207ENST00000490609 VPS13BQ7Z7G8 4022 aa10.85□□□□□ -0.67
COL2A1-207ENST00000490609 H3BP45 60 aa10.84□□□□□ -0.67
COL2A1-207ENST00000490609 CCNKO75909 580 aa10.84□□□□□ -0.67
COL2A1-207ENST00000490609 CDK2AP2O75956 126 aa10.84□□□□□ -0.67
COL2A1-207ENST00000490609 SFT2D2O95562 160 aa10.84□□□□□ -0.67
COL2A1-207ENST00000490609 TMBIM6P55061 237 aa10.84□□□□□ -0.67
COL2A1-207ENST00000490609 KIR3DS1Q14943 382 aa10.84□□□□□ -0.67
COL2A1-207ENST00000490609 SOHLH1Q5JUK2 328 aa10.84□□□□□ -0.67
COL2A1-207ENST00000490609 ACOT7LQ6ZUV0 252 aa10.84□□□□□ -0.67
COL2A1-207ENST00000490609 RAB2BQ8WUD1 216 aa10.84□□□□□ -0.67
COL2A1-207ENST00000490609 SHANK2-AS3Q9BTD1 123 aa10.84□□□□□ -0.67
COL2A1-207ENST00000490609 TMEM208Q9BTX3 173 aa10.84□□□□□ -0.67
COL2A1-207ENST00000490609 KRTAP1-5Q9BYS1 174 aa10.84□□□□□ -0.67
COL2A1-207ENST00000490609 DUSP14O95147 198 aaKnown RBP10.83□□□□□ -0.68
COL2A1-207ENST00000490609 INSP01308 110 aa10.83□□□□□ -0.68
COL2A1-207ENST00000490609 HOXB5P09067 269 aa10.83□□□□□ -0.68
COL2A1-207ENST00000490609 CXCL3P19876 107 aa10.83□□□□□ -0.68
COL2A1-207ENST00000490609 PLP1P60201 277 aa10.83□□□□□ -0.68
COL2A1-207ENST00000490609 ID3Q02535 119 aa10.83□□□□□ -0.68
COL2A1-207ENST00000490609 SPANXN5Q5MJ07 72 aa10.83□□□□□ -0.68
COL2A1-207ENST00000490609 TMEM144Q7Z5S9 345 aa10.83□□□□□ -0.68
COL2A1-207ENST00000490609 C6orf223Q8N319 242 aa10.83□□□□□ -0.68
COL2A1-207ENST00000490609 BPIFCQ8NFQ6 507 aa10.83□□□□□ -0.68
COL2A1-207ENST00000490609 RNF141Q8WVD5 230 aa10.83□□□□□ -0.68
COL2A1-207ENST00000490609 GPR82Q96P67 336 aa10.83□□□□□ -0.68
COL2A1-207ENST00000490609 UHRF2Q96PU4 802 aa10.83□□□□□ -0.68
COL2A1-207ENST00000490609 TMED3Q9Y3Q3 217 aa10.83□□□□□ -0.68
COL2A1-207ENST00000490609 V9GYH0 126 aa10.83□□□□□ -0.68
COL2A1-207ENST00000490609 CBY3A6NI87 242 aa10.82□□□□□ -0.68
COL2A1-207ENST00000490609 C16orf90A8MZG2 172 aa10.82□□□□□ -0.68
COL2A1-207ENST00000490609 F5H768 121 aa10.82□□□□□ -0.68
COL2A1-207ENST00000490609 H3BMQ9 156 aa10.82□□□□□ -0.68
COL2A1-207ENST00000490609 MED6O75586 246 aa10.82□□□□□ -0.68
COL2A1-207ENST00000490609 CYP2G1PQ6ZSU1 146 aa10.82□□□□□ -0.68
COL2A1-207ENST00000490609 OR8A1Q8NGG7 326 aa10.82□□□□□ -0.68
COL2A1-207ENST00000490609 TMEM147Q9BVK8 224 aa10.82□□□□□ -0.68
COL2A1-207ENST00000490609 A0A087X0K7 114 aa10.81□□□□□ -0.68
COL2A1-207ENST00000490609 BOLA2-SMG1P6H3BVE0 249 aa10.81□□□□□ -0.68
COL2A1-207ENST00000490609 ADAP1O75689 374 aa10.81□□□□□ -0.68
COL2A1-207ENST00000490609 NUDT3O95989 172 aa10.81□□□□□ -0.68
COL2A1-207ENST00000490609 VAMP1P23763 118 aa10.81□□□□□ -0.68
COL2A1-207ENST00000490609 POLR2GP62487 172 aaKnown RBP eCLIP10.81□□□□□ -0.68
COL2A1-207ENST00000490609 FGL1Q08830 312 aa10.81□□□□□ -0.68
COL2A1-207ENST00000490609 ZBTB8BQ8NAP8 495 aaPredicted RBP10.81□□□□□ -0.68
COL2A1-207ENST00000490609 CIB3Q96Q77 187 aaPredicted RBP10.81□□□□□ -0.68
COL2A1-207ENST00000490609 BCL7BQ9BQE9 202 aa10.81□□□□□ -0.68
COL2A1-207ENST00000490609 B2MP61769 119 aa10.8□□□□□ -0.68
COL2A1-207ENST00000490609 AKR1C1Q04828 323 aa10.8□□□□□ -0.68
COL2A1-207ENST00000490609 PSG3Q16557 428 aa10.8□□□□□ -0.68
COL2A1-207ENST00000490609 LINC00612Q8N6U2 182 aa10.8□□□□□ -0.68
COL2A1-207ENST00000490609 ZNF738Q8NE65 137 aa10.8□□□□□ -0.68
COL2A1-207ENST00000490609 RNASE8Q8TDE3 154 aaKnown RBP10.8□□□□□ -0.68
COL2A1-207ENST00000490609 LINC01587Q99440 93 aa10.8□□□□□ -0.68
COL2A1-207ENST00000490609 ATG101Q9BSB4 218 aa10.8□□□□□ -0.68
COL2A1-207ENST00000490609 STRAPQ9Y3F4 350 aaKnown RBP10.8□□□□□ -0.68
COL2A1-207ENST00000490609 PRAC2D3DTV9 90 aa10.79□□□□□ -0.68
COL2A1-207ENST00000490609 HYPMO75409 117 aa10.79□□□□□ -0.68
COL2A1-207ENST00000490609 ATP5G1P05496 136 aa10.79□□□□□ -0.68
COL2A1-207ENST00000490609 ATP5G3P48201 142 aa10.79□□□□□ -0.68
COL2A1-207ENST00000490609 TAS2R60P59551 318 aa10.79□□□□□ -0.68
COL2A1-207ENST00000490609 RPP30P78346 268 aaKnown RBP10.79□□□□□ -0.68
COL2A1-207ENST00000490609 HIST1H1AQ02539 215 aaPredicted RBP10.79□□□□□ -0.68
COL2A1-207ENST00000490609 TOMM5Q8N4H5 51 aa10.79□□□□□ -0.68
COL2A1-207ENST00000490609 MAPKAPK5-AS1Q8N8E1 139 aa10.79□□□□□ -0.68
COL2A1-207ENST00000490609 MCFD2Q8NI22 146 aa10.79□□□□□ -0.68
COL2A1-207ENST00000490609 SLC25A21Q9BQT8 299 aaPredicted RBP10.79□□□□□ -0.68
COL2A1-207ENST00000490609 PARD6GQ9BYG4 376 aaPredicted RBP10.79□□□□□ -0.68
COL2A1-207ENST00000490609 HIGD1AQ9Y241 93 aa10.79□□□□□ -0.68
COL2A1-207ENST00000490609 IL5P05113 134 aa10.78□□□□□ -0.68
COL2A1-207ENST00000490609 SNRPCP09234 159 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms