RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 AQP10Q96PS8 301 aa10.66□□□□□ -0.7
SRGAP3-208ENST00000490348 SLC39A9Q9NUM3 307 aa10.66□□□□□ -0.7
SRGAP3-208ENST00000490348 PXMP4Q9Y6I8 212 aa10.66□□□□□ -0.7
SRGAP3-208ENST00000490348 RNF222A6NCQ9 220 aa10.65□□□□□ -0.7
SRGAP3-208ENST00000490348 SOCS3O14543 225 aa10.65□□□□□ -0.7
SRGAP3-208ENST00000490348 B2MP61769 119 aa10.65□□□□□ -0.7
SRGAP3-208ENST00000490348 PXDC1Q5TGL8 231 aa10.65□□□□□ -0.7
SRGAP3-208ENST00000490348 ZNF688P0C7X2 276 aa10.65□□□□□ -0.71
SRGAP3-208ENST00000490348 HAGHQ16775 308 aa10.65□□□□□ -0.71
SRGAP3-208ENST00000490348 GCSAMLQ5JQS6 135 aa10.65□□□□□ -0.71
SRGAP3-208ENST00000490348 LINC00305Q7Z4B0 112 aa10.65□□□□□ -0.71
SRGAP3-208ENST00000490348 FBXL17Q9UF56 701 aa10.65□□□□□ -0.71
SRGAP3-208ENST00000490348 TNFSF18Q9UNG2 199 aa10.65□□□□□ -0.71
SRGAP3-208ENST00000490348 FXYD6-FXYD2A0A087WZ82 144 aa10.64□□□□□ -0.71
SRGAP3-208ENST00000490348 MRPS12O15235 138 aaKnown RBP10.64□□□□□ -0.71
SRGAP3-208ENST00000490348 COX7A2P2O60397 106 aa10.64□□□□□ -0.71
SRGAP3-208ENST00000490348 DEFB131AP59861 70 aa10.64□□□□□ -0.71
SRGAP3-208ENST00000490348 RSG1Q9BU20 258 aa10.64□□□□□ -0.71
SRGAP3-208ENST00000490348 DNAJC4Q9NNZ3 241 aa10.64□□□□□ -0.71
SRGAP3-208ENST00000490348 RFNGQ9Y644 331 aa10.64□□□□□ -0.71
SRGAP3-208ENST00000490348 ELOA3CA0A087WX78 387 aaPredicted RBP10.63□□□□□ -0.71
SRGAP3-208ENST00000490348 C10orf113Q5VZT2 155 aa10.63□□□□□ -0.71
SRGAP3-208ENST00000490348 Q6ZRG5 221 aa10.63□□□□□ -0.71
SRGAP3-208ENST00000490348 AKAP14Q86UN6 197 aa10.63□□□□□ -0.71
SRGAP3-208ENST00000490348 AGRNO00468 2067 aa10.62□□□□□ -0.71
SRGAP3-208ENST00000490348 TRAV5A0A0B4J249 113 aa10.62□□□□□ -0.71
SRGAP3-208ENST00000490348 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.62□□□□□ -0.71
SRGAP3-208ENST00000490348 TM2D3Q9BRN9 247 aa10.62□□□□□ -0.71
SRGAP3-208ENST00000490348 PARD6GQ9BYG4 376 aaPredicted RBP10.62□□□□□ -0.71
SRGAP3-208ENST00000490348 ATP6V1G1O75348 118 aa10.61□□□□□ -0.71
SRGAP3-208ENST00000490348 GALR1P47211 349 aa10.61□□□□□ -0.71
SRGAP3-208ENST00000490348 CMC4P56277 68 aaPredicted RBP10.61□□□□□ -0.71
SRGAP3-208ENST00000490348 PSMG4Q5JS54 123 aa10.61□□□□□ -0.71
SRGAP3-208ENST00000490348 OR11H4Q8NGC9 324 aa10.61□□□□□ -0.71
SRGAP3-208ENST00000490348 GPR82Q96P67 336 aa10.61□□□□□ -0.71
SRGAP3-208ENST00000490348 LOC102724200A0A096LPH7 203 aaPredicted RBP10.6□□□□□ -0.71
SRGAP3-208ENST00000490348 IFNA5P01569 189 aa10.6□□□□□ -0.71
SRGAP3-208ENST00000490348 RPL7P18124 248 aaKnown RBP10.6□□□□□ -0.71
SRGAP3-208ENST00000490348 S100A7P31151 101 aa10.6□□□□□ -0.71
SRGAP3-208ENST00000490348 DEFB1P60022 68 aa10.6□□□□□ -0.71
SRGAP3-208ENST00000490348 INO80EQ8NBZ0 244 aaPredicted RBP10.6□□□□□ -0.71
SRGAP3-208ENST00000490348 OR1L4Q8NGR5 311 aa10.6□□□□□ -0.71
SRGAP3-208ENST00000490348 C20orf173Q96LM9 149 aa10.6□□□□□ -0.71
SRGAP3-208ENST00000490348 PFDN5Q99471 154 aa10.6□□□□□ -0.71
SRGAP3-208ENST00000490348 SEPSECSQ9HD40 501 aaKnown RBP10.6□□□□□ -0.71
SRGAP3-208ENST00000490348 TRAV8-2A0A0B4J237 113 aa10.6□□□□□ -0.71
SRGAP3-208ENST00000490348 KNCNA6PVL3 124 aa10.6□□□□□ -0.71
SRGAP3-208ENST00000490348 ARPC5O15511 151 aa10.6□□□□□ -0.71
SRGAP3-208ENST00000490348 SNRPCP09234 159 aaKnown RBP10.6□□□□□ -0.71
SRGAP3-208ENST00000490348 NHLRC4P0CG21 123 aaPredicted RBP10.6□□□□□ -0.71
SRGAP3-208ENST00000490348 RPL35AP18077 110 aaKnown RBP10.6□□□□□ -0.71
SRGAP3-208ENST00000490348 SPATA31B1PQ5VZV4 182 aa10.6□□□□□ -0.71
SRGAP3-208ENST00000490348 ZNF709Q8N972 641 aa10.6□□□□□ -0.71
SRGAP3-208ENST00000490348 GATAD1Q8WUU5 269 aa10.6□□□□□ -0.71
SRGAP3-208ENST00000490348 ST6GAL2Q96JF0 529 aa10.6□□□□□ -0.71
SRGAP3-208ENST00000490348 A0A087X0K7 114 aa10.59□□□□□ -0.71
SRGAP3-208ENST00000490348 ISLRO14498 428 aa10.59□□□□□ -0.71
SRGAP3-208ENST00000490348 IGLC2P0DOY2 106 aa10.59□□□□□ -0.71
SRGAP3-208ENST00000490348 PSMB3P49720 205 aa10.59□□□□□ -0.71
SRGAP3-208ENST00000490348 SNRPD3P62318 126 aaKnown RBP10.59□□□□□ -0.71
SRGAP3-208ENST00000490348 IGFL4Q6B9Z1 124 aa10.59□□□□□ -0.71
SRGAP3-208ENST00000490348 S100A7AQ86SG5 101 aa10.59□□□□□ -0.71
SRGAP3-208ENST00000490348 SCGB1C1Q8TD33 95 aa10.59□□□□□ -0.71
SRGAP3-208ENST00000490348 RETNQ9HD89 108 aa10.59□□□□□ -0.71
SRGAP3-208ENST00000490348 C17orf112F2Z3M2 114 aa10.58□□□□□ -0.72
SRGAP3-208ENST00000490348 H3BQ15 152 aa10.58□□□□□ -0.72
SRGAP3-208ENST00000490348 ACTL10Q5JWF8 245 aa10.58□□□□□ -0.72
SRGAP3-208ENST00000490348 GDF5OSQ5U4N7 250 aa10.58□□□□□ -0.72
SRGAP3-208ENST00000490348 MIR17HGQ75NE6 70 aa10.58□□□□□ -0.72
SRGAP3-208ENST00000490348 LINC00052Q96N35 136 aa10.58□□□□□ -0.72
SRGAP3-208ENST00000490348 KCNIP2Q9NS61 270 aa10.58□□□□□ -0.72
SRGAP3-208ENST00000490348 CSMD3Q7Z407 3707 aa10.57□□□□□ -0.72
SRGAP3-208ENST00000490348 ATF4P18848 351 aaPredicted RBP10.57□□□□□ -0.72
SRGAP3-208ENST00000490348 MEOX2P50222 304 aa10.57□□□□□ -0.72
SRGAP3-208ENST00000490348 ZNF266Q14584 549 aa10.57□□□□□ -0.72
SRGAP3-208ENST00000490348 FFAR4Q5NUL3 377 aa10.57□□□□□ -0.72
SRGAP3-208ENST00000490348 FAM78BQ5VT40 261 aa10.57□□□□□ -0.72
SRGAP3-208ENST00000490348 RPL7L1Q6DKI1 246 aaKnown RBP10.57□□□□□ -0.72
SRGAP3-208ENST00000490348 TRPT1Q86TN4 253 aaKnown RBP10.57□□□□□ -0.72
SRGAP3-208ENST00000490348 BPIFA4PQ86YQ2 179 aa10.57□□□□□ -0.72
SRGAP3-208ENST00000490348 RNF182Q8N6D2 247 aa10.57□□□□□ -0.72
SRGAP3-208ENST00000490348 HSD17B11Q8NBQ5 300 aa10.57□□□□□ -0.72
SRGAP3-208ENST00000490348 FAM167A-AS1Q96KT0 104 aa10.57□□□□□ -0.72
SRGAP3-208ENST00000490348 C16orf92Q96LL3 132 aa10.57□□□□□ -0.72
SRGAP3-208ENST00000490348 SLC25A2Q9BXI2 301 aa10.57□□□□□ -0.72
SRGAP3-208ENST00000490348 H3BTX0 84 aa10.56□□□□□ -0.72
SRGAP3-208ENST00000490348 SLC17A3O00476 420 aa10.56□□□□□ -0.72
SRGAP3-208ENST00000490348 GIG44P09565 113 aaPredicted RBP10.56□□□□□ -0.72
SRGAP3-208ENST00000490348 HLA-DMBP28068 263 aa10.56□□□□□ -0.72
SRGAP3-208ENST00000490348 MFFQ9GZY8 342 aa10.56□□□□□ -0.72
SRGAP3-208ENST00000490348 SH3BGRL3Q9H299 93 aa10.56□□□□□ -0.72
SRGAP3-208ENST00000490348 HRH4Q9H3N8 390 aa10.56□□□□□ -0.72
SRGAP3-208ENST00000490348 RNF24Q9Y225 148 aa10.56□□□□□ -0.72
SRGAP3-208ENST00000490348 TIMM9Q9Y5J7 89 aa10.56□□□□□ -0.72
SRGAP3-208ENST00000490348 KIR2DL5BA0A0G2JN68 375 aa10.56□□□□□ -0.72
SRGAP3-208ENST00000490348 KIR2DL5BA0A0G2JPC4 375 aa10.56□□□□□ -0.72
SRGAP3-208ENST00000490348 F6UB75 175 aa10.56□□□□□ -0.72
SRGAP3-208ENST00000490348 PYYP10082 97 aa10.56□□□□□ -0.72
SRGAP3-208ENST00000490348 ATP6V0CP27449 155 aa10.56□□□□□ -0.72
SRGAP3-208ENST00000490348 ID1P41134 155 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms