RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 ID1P41134 155 aa8.21□□□□□ -1.1
CPSF7-212ENST00000489728 B2MP61769 119 aa8.21□□□□□ -1.1
CPSF7-212ENST00000489728 CLINT1Q14677 625 aa8.21□□□□□ -1.1
CPSF7-212ENST00000489728 C10orf113Q5VZT2 155 aa8.21□□□□□ -1.1
CPSF7-212ENST00000489728 WFDC3Q8IUB2 231 aa8.21□□□□□ -1.1
CPSF7-212ENST00000489728 ZNF709Q8N972 641 aa8.21□□□□□ -1.1
CPSF7-212ENST00000489728 GATAD1Q8WUU5 269 aa8.21□□□□□ -1.1
CPSF7-212ENST00000489728 CITED4Q96RK1 184 aa8.21□□□□□ -1.1
CPSF7-212ENST00000489728 SCRT1Q9BWW7 348 aa8.21□□□□□ -1.1
CPSF7-212ENST00000489728 SLC25A32Q9H2D1 315 aa8.21□□□□□ -1.1
CPSF7-212ENST00000489728 SLC25A22Q9H936 323 aa8.21□□□□□ -1.1
CPSF7-212ENST00000489728 DNAJC4Q9NNZ3 241 aa8.21□□□□□ -1.1
CPSF7-212ENST00000489728 SLC39A9Q9NUM3 307 aa8.21□□□□□ -1.1
CPSF7-212ENST00000489728 DOK5Q9P104 306 aa8.21□□□□□ -1.1
CPSF7-212ENST00000489728 PXMP4Q9Y6I8 212 aa8.21□□□□□ -1.1
CPSF7-212ENST00000489728 A0A087X0K7 114 aa8.2□□□□□ -1.1
CPSF7-212ENST00000489728 SOCS3O14543 225 aa8.2□□□□□ -1.1
CPSF7-212ENST00000489728 IFNA5P01569 189 aa8.2□□□□□ -1.1
CPSF7-212ENST00000489728 ZNF688P0C7X2 276 aa8.2□□□□□ -1.1
CPSF7-212ENST00000489728 CXCL2P19875 107 aa8.2□□□□□ -1.1
CPSF7-212ENST00000489728 DEFB131AP59861 70 aa8.2□□□□□ -1.1
CPSF7-212ENST00000489728 ZNF266Q14584 549 aa8.2□□□□□ -1.1
CPSF7-212ENST00000489728 MIC13Q5XKP0 118 aa8.2□□□□□ -1.1
CPSF7-212ENST00000489728 PATE2Q6UY27 113 aa8.2□□□□□ -1.1
CPSF7-212ENST00000489728 LINC00305Q7Z4B0 112 aa8.2□□□□□ -1.1
CPSF7-212ENST00000489728 FAM24BQ8N5W8 94 aa8.2□□□□□ -1.1
CPSF7-212ENST00000489728 OR2T35Q8NGX2 323 aa8.2□□□□□ -1.1
CPSF7-212ENST00000489728 UHRF2Q96PU4 802 aa8.2□□□□□ -1.1
CPSF7-212ENST00000489728 U3KQK5 164 aa8.2□□□□□ -1.1
CPSF7-212ENST00000489728 DNAH9Q9NYC9 4486 aa8.19□□□□□ -1.1
CPSF7-212ENST00000489728 ATF4P18848 351 aaPredicted RBP8.19□□□□□ -1.1
CPSF7-212ENST00000489728 TMEM41BQ5BJD5 291 aa8.19□□□□□ -1.1
CPSF7-212ENST00000489728 SPATA31B1PQ5VZV4 182 aa8.19□□□□□ -1.1
CPSF7-212ENST00000489728 Q6ZWC4 215 aa8.19□□□□□ -1.1
CPSF7-212ENST00000489728 BPIFA4PQ86YQ2 179 aa8.19□□□□□ -1.1
CPSF7-212ENST00000489728 APRG1Q8IVJ8 170 aa8.19□□□□□ -1.1
CPSF7-212ENST00000489728 INO80EQ8NBZ0 244 aaPredicted RBP8.19□□□□□ -1.1
CPSF7-212ENST00000489728 SCGB1C1Q8TD33 95 aa8.19□□□□□ -1.1
CPSF7-212ENST00000489728 TMEM37Q8WXS4 190 aa8.19□□□□□ -1.1
CPSF7-212ENST00000489728 ASCL2Q99929 193 aa8.19□□□□□ -1.1
CPSF7-212ENST00000489728 TP53TG1Q9Y2A0 90 aa8.19□□□□□ -1.1
CPSF7-212ENST00000489728 MRPS12O15235 138 aaKnown RBP8.18□□□□□ -1.1
CPSF7-212ENST00000489728 SPP1P10451 314 aa8.18□□□□□ -1.1
CPSF7-212ENST00000489728 GUK1Q16774 197 aa8.18□□□□□ -1.1
CPSF7-212ENST00000489728 PSMG4Q5JS54 123 aa8.18□□□□□ -1.1
CPSF7-212ENST00000489728 LEMD1Q68G75 181 aa8.18□□□□□ -1.1
CPSF7-212ENST00000489728 MORN3Q6PF18 240 aaPredicted RBP8.18□□□□□ -1.1
CPSF7-212ENST00000489728 STHQ8IWL8 128 aa8.18□□□□□ -1.1
CPSF7-212ENST00000489728 CLUHP3Q96NS8 147 aa8.18□□□□□ -1.1
CPSF7-212ENST00000489728 RCHY1Q96PM5 261 aa8.18□□□□□ -1.1
CPSF7-212ENST00000489728 RSG1Q9BU20 258 aa8.18□□□□□ -1.1
CPSF7-212ENST00000489728 MRPL32Q9BYC8 188 aaKnown RBP8.18□□□□□ -1.1
CPSF7-212ENST00000489728 TNFSF18Q9UNG2 199 aa8.18□□□□□ -1.1
CPSF7-212ENST00000489728 TIMM9Q9Y5J7 89 aa8.18□□□□□ -1.1
CPSF7-212ENST00000489728 LCN15Q6UWW0 184 aa8.17□□□□□ -1.1
CPSF7-212ENST00000489728 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.17□□□□□ -1.1
CPSF7-212ENST00000489728 FOXI2Q6ZQN5 318 aa8.17□□□□□ -1.1
CPSF7-212ENST00000489728 TRPT1Q86TN4 253 aaKnown RBP8.17□□□□□ -1.1
CPSF7-212ENST00000489728 C16orf92Q96LL3 132 aa8.17□□□□□ -1.1
CPSF7-212ENST00000489728 SLC50A1Q9BRV3 221 aa8.17□□□□□ -1.1
CPSF7-212ENST00000489728 HRH4Q9H3N8 390 aa8.17□□□□□ -1.1
CPSF7-212ENST00000489728 RPRMQ9NS64 109 aa8.17□□□□□ -1.1
CPSF7-212ENST00000489728 CLEC5AQ9NY25 188 aa8.17□□□□□ -1.1
CPSF7-212ENST00000489728 TMEM14CQ9P0S9 112 aa8.17□□□□□ -1.1
CPSF7-212ENST00000489728 FXYD6-FXYD2A0A087WZ82 144 aa8.16□□□□□ -1.1
CPSF7-212ENST00000489728 RNF222A6NCQ9 220 aa8.16□□□□□ -1.1
CPSF7-212ENST00000489728 G3V3Q6 166 aa8.16□□□□□ -1.1
CPSF7-212ENST00000489728 ZNF253O75346 499 aa8.16□□□□□ -1.1
CPSF7-212ENST00000489728 IGLC2P0DOY2 106 aa8.16□□□□□ -1.1
CPSF7-212ENST00000489728 HLA-DRB4P13762 266 aa8.16□□□□□ -1.1
CPSF7-212ENST00000489728 NUTF2P61970 127 aaKnown RBP8.16□□□□□ -1.1
CPSF7-212ENST00000489728 ZNF124Q15973 351 aa8.16□□□□□ -1.1
CPSF7-212ENST00000489728 Q5BKY6 102 aa8.16□□□□□ -1.1
CPSF7-212ENST00000489728 C17orf77Q96MU5 243 aa8.16□□□□□ -1.1
CPSF7-212ENST00000489728 SMIM3Q9BZL3 60 aa8.16□□□□□ -1.1
CPSF7-212ENST00000489728 CSTL1Q9H114 145 aa8.16□□□□□ -1.1
CPSF7-212ENST00000489728 SAV1Q9H4B6 383 aaPredicted RBP8.16□□□□□ -1.1
CPSF7-212ENST00000489728 HLA-DRB4X5D2U9 266 aa8.16□□□□□ -1.1
CPSF7-212ENST00000489728 TAAR5O14804 337 aa8.15□□□□□ -1.1
CPSF7-212ENST00000489728 PDE6HQ13956 83 aa8.15□□□□□ -1.1
CPSF7-212ENST00000489728 ZNF345Q14585 488 aa8.15□□□□□ -1.1
CPSF7-212ENST00000489728 ACTL10Q5JWF8 245 aa8.15□□□□□ -1.1
CPSF7-212ENST00000489728 Q6ZNX1 250 aa8.15□□□□□ -1.1
CPSF7-212ENST00000489728 OR2G3Q8NGZ4 309 aa8.15□□□□□ -1.1
CPSF7-212ENST00000489728 WWC2-AS2Q96NR7 200 aa8.15□□□□□ -1.1
CPSF7-212ENST00000489728 PSMG3Q9BT73 122 aaPredicted RBP8.15□□□□□ -1.1
CPSF7-212ENST00000489728 WFDC1Q9HC57 220 aa8.15□□□□□ -1.1
CPSF7-212ENST00000489728 STAB2Q8WWQ8 2551 aa8.15□□□□□ -1.11
CPSF7-212ENST00000489728 BORCS7-ASMTA0A0B4J1R7 106 aa8.14□□□□□ -1.11
CPSF7-212ENST00000489728 HMSDA8MTL9 139 aa8.14□□□□□ -1.11
CPSF7-212ENST00000489728 A8MTW9 85 aa8.14□□□□□ -1.11
CPSF7-212ENST00000489728 H3BMM0 161 aa8.14□□□□□ -1.11
CPSF7-212ENST00000489728 RPL35AP18077 110 aaKnown RBP8.14□□□□□ -1.11
CPSF7-212ENST00000489728 FFAR4Q5NUL3 377 aa8.14□□□□□ -1.11
CPSF7-212ENST00000489728 FAM78BQ5VT40 261 aa8.14□□□□□ -1.11
CPSF7-212ENST00000489728 MORN5Q5VZ52 161 aa8.14□□□□□ -1.11
CPSF7-212ENST00000489728 EBLN2Q6P2I7 272 aa8.14□□□□□ -1.11
CPSF7-212ENST00000489728 LRRC20Q8TCA0 184 aa8.14□□□□□ -1.11
CPSF7-212ENST00000489728 RNF183Q96D59 192 aa8.14□□□□□ -1.11
CPSF7-212ENST00000489728 GNPNAT1Q96EK6 184 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms