RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 ORM2P19652 201 aa11.85□□□□□ -0.51
TOP3B-217ENST00000489581 GATA2P23769 480 aaPredicted RBP11.85□□□□□ -0.51
TOP3B-217ENST00000489581 TSPOP30536 169 aa11.85□□□□□ -0.51
TOP3B-217ENST00000489581 B2MP61769 119 aa11.85□□□□□ -0.51
TOP3B-217ENST00000489581 RAB11AP62491 216 aa11.85□□□□□ -0.51
TOP3B-217ENST00000489581 FGL1Q08830 312 aa11.85□□□□□ -0.51
TOP3B-217ENST00000489581 CLINT1Q14677 625 aa11.85□□□□□ -0.51
TOP3B-217ENST00000489581 GGNBP1Q5YKI7 109 aa11.85□□□□□ -0.51
TOP3B-217ENST00000489581 GPR141Q7Z602 305 aa11.85□□□□□ -0.51
TOP3B-217ENST00000489581 RNF141Q8WVD5 230 aa11.85□□□□□ -0.51
TOP3B-217ENST00000489581 SLC25A39Q9BZJ4 359 aaPredicted RBP11.85□□□□□ -0.51
TOP3B-217ENST00000489581 DNAH5Q8TE73 4624 aa11.84□□□□□ -0.51
TOP3B-217ENST00000489581 TRAV8-2A0A0B4J237 113 aa11.84□□□□□ -0.51
TOP3B-217ENST00000489581 CBY3A6NI87 242 aa11.84□□□□□ -0.51
TOP3B-217ENST00000489581 CFDP00746 253 aaPredicted RBP11.84□□□□□ -0.51
TOP3B-217ENST00000489581 HTN1P15515 57 aa11.84□□□□□ -0.51
TOP3B-217ENST00000489581 TMEM182Q6ZP80 229 aaPredicted RBP11.84□□□□□ -0.51
TOP3B-217ENST00000489581 SSX7Q7RTT5 188 aa11.84□□□□□ -0.51
TOP3B-217ENST00000489581 OR1B1Q8NGR6 318 aa11.84□□□□□ -0.51
TOP3B-217ENST00000489581 LINC01587Q99440 93 aa11.84□□□□□ -0.51
TOP3B-217ENST00000489581 SLC45A2Q9UMX9 530 aa11.84□□□□□ -0.51
TOP3B-217ENST00000489581 IL18Q14116 193 aa11.83□□□□□ -0.52
TOP3B-217ENST00000489581 BPIFCQ8NFQ6 507 aa11.83□□□□□ -0.52
TOP3B-217ENST00000489581 OR4D5Q8NGN0 318 aa11.83□□□□□ -0.52
TOP3B-217ENST00000489581 SCGB3A2Q96PL1 93 aa11.83□□□□□ -0.52
TOP3B-217ENST00000489581 Q9H8V8 135 aa11.83□□□□□ -0.52
TOP3B-217ENST00000489581 SCP2D1Q9UJQ7 156 aa11.83□□□□□ -0.52
TOP3B-217ENST00000489581 ANKRD20A5PA0PJZ0 165 aa11.82□□□□□ -0.52
TOP3B-217ENST00000489581 CTDSPLO15194 276 aa11.82□□□□□ -0.52
TOP3B-217ENST00000489581 PITX3O75364 302 aa11.82□□□□□ -0.52
TOP3B-217ENST00000489581 PRB4P10163 310 aaPredicted RBP11.82□□□□□ -0.52
TOP3B-217ENST00000489581 ANXA3P12429 323 aa11.82□□□□□ -0.52
TOP3B-217ENST00000489581 RHOBP62745 196 aa11.82□□□□□ -0.52
TOP3B-217ENST00000489581 ZNF738Q8NE65 137 aa11.82□□□□□ -0.52
TOP3B-217ENST00000489581 TMEM147Q9BVK8 224 aa11.82□□□□□ -0.52
TOP3B-217ENST00000489581 MCUBQ9NWR8 336 aa11.82□□□□□ -0.52
TOP3B-217ENST00000489581 BOLA2-SMG1P6H3BVE0 249 aa11.81□□□□□ -0.52
TOP3B-217ENST00000489581 KRTAP10-2P60368 255 aa11.81□□□□□ -0.52
TOP3B-217ENST00000489581 SRPXP78539 464 aa11.81□□□□□ -0.52
TOP3B-217ENST00000489581 HIST1H1AQ02539 215 aaPredicted RBP11.81□□□□□ -0.52
TOP3B-217ENST00000489581 DIRAS2Q96HU8 199 aa11.81□□□□□ -0.52
TOP3B-217ENST00000489581 GPR82Q96P67 336 aa11.81□□□□□ -0.52
TOP3B-217ENST00000489581 UHRF2Q96PU4 802 aa11.81□□□□□ -0.52
TOP3B-217ENST00000489581 KRTAP1-5Q9BYS1 174 aa11.81□□□□□ -0.52
TOP3B-217ENST00000489581 PPP1R14DQ9NXH3 145 aa11.81□□□□□ -0.52
TOP3B-217ENST00000489581 PRSS46E5RG02 174 aa11.8□□□□□ -0.52
TOP3B-217ENST00000489581 TAS2R60P59551 318 aa11.8□□□□□ -0.52
TOP3B-217ENST00000489581 C16orf74Q96GX8 76 aa11.8□□□□□ -0.52
TOP3B-217ENST00000489581 NOP10Q9NPE3 64 aaKnown RBP11.8□□□□□ -0.52
TOP3B-217ENST00000489581 TIMM8BQ9Y5J9 83 aaPredicted RBP11.8□□□□□ -0.52
TOP3B-217ENST00000489581 WRBO00258 174 aa11.79□□□□□ -0.52
TOP3B-217ENST00000489581 S100A7P31151 101 aa11.79□□□□□ -0.52
TOP3B-217ENST00000489581 AKR1C1Q04828 323 aa11.79□□□□□ -0.52
TOP3B-217ENST00000489581 OR5I1Q13606 314 aa11.79□□□□□ -0.52
TOP3B-217ENST00000489581 TMEM144Q7Z5S9 345 aa11.79□□□□□ -0.52
TOP3B-217ENST00000489581 TMEM256Q8N2U0 113 aa11.79□□□□□ -0.52
TOP3B-217ENST00000489581 OR8A1Q8NGG7 326 aa11.79□□□□□ -0.52
TOP3B-217ENST00000489581 H3BRN7 92 aa11.78□□□□□ -0.52
TOP3B-217ENST00000489581 MED6O75586 246 aa11.78□□□□□ -0.52
TOP3B-217ENST00000489581 RPP30P78346 268 aaKnown RBP11.78□□□□□ -0.52
TOP3B-217ENST00000489581 DLK1P80370 383 aa11.78□□□□□ -0.52
TOP3B-217ENST00000489581 SPCS2Q15005 226 aa11.78□□□□□ -0.52
TOP3B-217ENST00000489581 GNPNAT1Q96EK6 184 aaPredicted RBP11.78□□□□□ -0.52
TOP3B-217ENST00000489581 CIB3Q96Q77 187 aaPredicted RBP11.78□□□□□ -0.52
TOP3B-217ENST00000489581 TRAV26-1A0A087WT03 109 aa11.77□□□□□ -0.53
TOP3B-217ENST00000489581 A0A0J9YY99 117 aa11.77□□□□□ -0.53
TOP3B-217ENST00000489581 DUXBA0A1W2PPF3 345 aa11.77□□□□□ -0.53
TOP3B-217ENST00000489581 SYNGR2O43760 224 aa11.77□□□□□ -0.53
TOP3B-217ENST00000489581 CXCL3P19876 107 aa11.77□□□□□ -0.53
TOP3B-217ENST00000489581 TTC32Q5I0X7 151 aa11.77□□□□□ -0.53
TOP3B-217ENST00000489581 SPANXN5Q5MJ07 72 aa11.77□□□□□ -0.53
TOP3B-217ENST00000489581 TMED4Q7Z7H5 227 aa11.77□□□□□ -0.53
TOP3B-217ENST00000489581 SHANK2-AS3Q9BTD1 123 aa11.77□□□□□ -0.53
TOP3B-217ENST00000489581 Q9H3A6 140 aa11.77□□□□□ -0.53
TOP3B-217ENST00000489581 H3BP45 60 aa11.76□□□□□ -0.53
TOP3B-217ENST00000489581 SMIM18P0DKX4 95 aa11.76□□□□□ -0.53
TOP3B-217ENST00000489581 SLC25A6P12236 298 aa11.76□□□□□ -0.53
TOP3B-217ENST00000489581 RPL7P18124 248 aaKnown RBP11.76□□□□□ -0.53
TOP3B-217ENST00000489581 RAP2BP61225 183 aa11.76□□□□□ -0.53
TOP3B-217ENST00000489581 PSG3Q16557 428 aa11.76□□□□□ -0.53
TOP3B-217ENST00000489581 ZNF493Q6ZR52 646 aa11.76□□□□□ -0.53
TOP3B-217ENST00000489581 ACOT7LQ6ZUV0 252 aa11.76□□□□□ -0.53
TOP3B-217ENST00000489581 LRRC20Q8TCA0 184 aa11.76□□□□□ -0.53
TOP3B-217ENST00000489581 RNASE8Q8TDE3 154 aaKnown RBP11.76□□□□□ -0.53
TOP3B-217ENST00000489581 RABL2AQ9UBK7 228 aaPredicted RBP11.76□□□□□ -0.53
TOP3B-217ENST00000489581 RABL2BQ9UNT1 228 aa11.76□□□□□ -0.53
TOP3B-217ENST00000489581 HIGD1AQ9Y241 93 aa11.76□□□□□ -0.53
TOP3B-217ENST00000489581 PIGBOS1A0A0B4J2F0 54 aa11.75□□□□□ -0.53
TOP3B-217ENST00000489581 SMCO3A2RU48 225 aa11.75□□□□□ -0.53
TOP3B-217ENST00000489581 ZNF701M0R085 212 aaPredicted RBP11.75□□□□□ -0.53
TOP3B-217ENST00000489581 IL5P05113 134 aa11.75□□□□□ -0.53
TOP3B-217ENST00000489581 VAMP1P23763 118 aa11.75□□□□□ -0.53
TOP3B-217ENST00000489581 ESRGQ1W209 222 aa11.75□□□□□ -0.53
TOP3B-217ENST00000489581 TMEM128Q5BJH2 165 aa11.75□□□□□ -0.53
TOP3B-217ENST00000489581 CYP2G1PQ6ZSU1 146 aa11.75□□□□□ -0.53
TOP3B-217ENST00000489581 OR10J6PQ8NGY7 276 aa11.75□□□□□ -0.53
TOP3B-217ENST00000489581 RXFP4Q8TDU9 374 aa11.75□□□□□ -0.53
TOP3B-217ENST00000489581 TMEM263Q8WUH6 116 aaKnown RBP11.75□□□□□ -0.53
TOP3B-217ENST00000489581 HYPMO75409 117 aa11.74□□□□□ -0.53
TOP3B-217ENST00000489581 OR5G3P0C626 314 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms