RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 L7N2F9 121 aa18.06■□□□□ 0.48
HMGN1-217ENST00000489072 HYPMO75409 117 aa18.06■□□□□ 0.48
HMGN1-217ENST00000489072 FXYD7P58549 80 aa18.06■□□□□ 0.48
HMGN1-217ENST00000489072 VAMP2P63027 116 aa18.06■□□□□ 0.48
HMGN1-217ENST00000489072 SAMD13Q5VXD3 122 aa18.06■□□□□ 0.48
HMGN1-217ENST00000489072 TEPPQ6URK8 271 aa18.06■□□□□ 0.48
HMGN1-217ENST00000489072 C2orf50Q96LR7 162 aa18.06■□□□□ 0.48
HMGN1-217ENST00000489072 GPR82Q96P67 336 aa18.06■□□□□ 0.48
HMGN1-217ENST00000489072 DEDDO75618 318 aa18.05■□□□□ 0.48
HMGN1-217ENST00000489072 S100A7P31151 101 aa18.05■□□□□ 0.48
HMGN1-217ENST00000489072 RAP2BP61225 183 aa18.05■□□□□ 0.48
HMGN1-217ENST00000489072 PATE2Q6UY27 113 aa18.05■□□□□ 0.48
HMGN1-217ENST00000489072 CLUHP3Q96NS8 147 aa18.05■□□□□ 0.48
HMGN1-217ENST00000489072 UHRF2Q96PU4 802 aa18.05■□□□□ 0.48
HMGN1-217ENST00000489072 GGACTQ9BVM4 153 aa18.05■□□□□ 0.48
HMGN1-217ENST00000489072 EPPK1P58107 5090 aaKnown RBP18.05■□□□□ 0.48
HMGN1-217ENST00000489072 A0A0J9YX75 114 aa18.04■□□□□ 0.48
HMGN1-217ENST00000489072 UPK1BO75841 260 aa18.04■□□□□ 0.48
HMGN1-217ENST00000489072 OR5G3P0C626 314 aa18.04■□□□□ 0.48
HMGN1-217ENST00000489072 IFITM3Q01628 133 aa18.04■□□□□ 0.48
HMGN1-217ENST00000489072 IL15RAQ13261 267 aa18.04■□□□□ 0.48
HMGN1-217ENST00000489072 ZNF709Q8N972 641 aa18.04■□□□□ 0.48
HMGN1-217ENST00000489072 OR4B1Q8NGF8 309 aa18.04■□□□□ 0.48
HMGN1-217ENST00000489072 HRH4Q9H3N8 390 aa18.04■□□□□ 0.48
HMGN1-217ENST00000489072 PTTG2Q9NZH5 202 aa18.04■□□□□ 0.48
HMGN1-217ENST00000489072 TRAV8-2A0A0B4J237 113 aa18.03■□□□□ 0.48
HMGN1-217ENST00000489072 LY6G6CO95867 125 aa18.03■□□□□ 0.48
HMGN1-217ENST00000489072 FAM78BQ5VT40 261 aa18.03■□□□□ 0.48
HMGN1-217ENST00000489072 SPATA31B1PQ5VZV4 182 aa18.03■□□□□ 0.48
HMGN1-217ENST00000489072 IGFL4Q6B9Z1 124 aa18.03■□□□□ 0.48
HMGN1-217ENST00000489072 ARL6Q9H0F7 186 aa18.03■□□□□ 0.48
HMGN1-217ENST00000489072 RPRMQ9NS64 109 aa18.03■□□□□ 0.48
HMGN1-217ENST00000489072 FAM24AA6NFZ4 105 aa18.02■□□□□ 0.48
HMGN1-217ENST00000489072 AGPAT2O15120 278 aa18.02■□□□□ 0.48
HMGN1-217ENST00000489072 BCAP31P51572 246 aa18.02■□□□□ 0.48
HMGN1-217ENST00000489072 CAV2P51636 162 aa18.02■□□□□ 0.48
HMGN1-217ENST00000489072 EBLN2Q6P2I7 272 aa18.02■□□□□ 0.48
HMGN1-217ENST00000489072 ZNF705AQ6ZN79 300 aaPredicted RBP18.02■□□□□ 0.48
HMGN1-217ENST00000489072 MGST2Q99735 147 aa18.02■□□□□ 0.48
HMGN1-217ENST00000489072 SLC35B3Q9H1N7 401 aa18.02■□□□□ 0.48
HMGN1-217ENST00000489072 CST7O76096 145 aa18.01■□□□□ 0.47
HMGN1-217ENST00000489072 ZNF546Q86UE3 836 aa18.01■□□□□ 0.47
HMGN1-217ENST00000489072 KMT2AQ03164 3969 aa18.01■□□□□ 0.47
HMGN1-217ENST00000489072 GOSR2O14653 212 aa18■□□□□ 0.47
HMGN1-217ENST00000489072 RPL7P18124 248 aaKnown RBP18■□□□□ 0.47
HMGN1-217ENST00000489072 HLA-DMBP28068 263 aa18■□□□□ 0.47
HMGN1-217ENST00000489072 S100A10P60903 97 aa18■□□□□ 0.47
HMGN1-217ENST00000489072 PSG9Q00887 426 aa18■□□□□ 0.47
HMGN1-217ENST00000489072 FGL1Q08830 312 aa18■□□□□ 0.47
HMGN1-217ENST00000489072 RAB32Q13637 225 aa18■□□□□ 0.47
HMGN1-217ENST00000489072 RNF182Q8N6D2 247 aa18■□□□□ 0.47
HMGN1-217ENST00000489072 ENKURQ8TC29 256 aa18■□□□□ 0.47
HMGN1-217ENST00000489072 ARV1Q9H2C2 271 aa18■□□□□ 0.47
HMGN1-217ENST00000489072 CELA1Q9UNI1 258 aa18■□□□□ 0.47
HMGN1-217ENST00000489072 A8MTW9 85 aa17.99■□□□□ 0.47
HMGN1-217ENST00000489072 ZNF705FA8MVS1 300 aaPredicted RBP17.99■□□□□ 0.47
HMGN1-217ENST00000489072 ZNF705DP0CH99 300 aaPredicted RBP17.99■□□□□ 0.47
HMGN1-217ENST00000489072 ZNF705BP0CI00 300 aaPredicted RBP17.99■□□□□ 0.47
HMGN1-217ENST00000489072 PXDC1Q5TGL8 231 aa17.98■□□□□ 0.47
HMGN1-217ENST00000489072 AMTNQ6UX39 209 aa17.98■□□□□ 0.47
HMGN1-217ENST00000489072 Q6ZTC4 211 aa17.98■□□□□ 0.47
HMGN1-217ENST00000489072 NEU1Q99519 415 aa17.98■□□□□ 0.47
HMGN1-217ENST00000489072 LYRM2Q9NU23 88 aaPredicted RBP17.98■□□□□ 0.47
HMGN1-217ENST00000489072 A0A087X0K7 114 aa17.97■□□□□ 0.47
HMGN1-217ENST00000489072 IGSF23A1L1A6 192 aa17.97■□□□□ 0.47
HMGN1-217ENST00000489072 MRPS12O15235 138 aaKnown RBP17.97■□□□□ 0.47
HMGN1-217ENST00000489072 PVALBP20472 110 aaPredicted RBP17.97■□□□□ 0.47
HMGN1-217ENST00000489072 C2CD4CQ8TF44 421 aa17.97■□□□□ 0.47
HMGN1-217ENST00000489072 IGHV3OR16-12A0A075B7B8 117 aa17.96■□□□□ 0.47
HMGN1-217ENST00000489072 NRARPQ7Z6K4 114 aa17.96■□□□□ 0.47
HMGN1-217ENST00000489072 S100A7AQ86SG5 101 aa17.96■□□□□ 0.47
HMGN1-217ENST00000489072 TMEM37Q8WXS4 190 aa17.96■□□□□ 0.47
HMGN1-217ENST00000489072 C11orf94C9JXX5 98 aa17.95■□□□□ 0.46
HMGN1-217ENST00000489072 SIX6O95475 246 aa17.95■□□□□ 0.46
HMGN1-217ENST00000489072 CAMLGP49069 296 aa17.95■□□□□ 0.46
HMGN1-217ENST00000489072 SULT1A1P50225 295 aa17.95■□□□□ 0.46
HMGN1-217ENST00000489072 VWC2Q2TAL6 325 aa17.95■□□□□ 0.46
HMGN1-217ENST00000489072 LINC00305Q7Z4B0 112 aa17.95■□□□□ 0.46
HMGN1-217ENST00000489072 C1orf158Q8N1D5 194 aa17.95■□□□□ 0.46
HMGN1-217ENST00000489072 TMEM252Q8N6L7 170 aa17.95■□□□□ 0.46
HMGN1-217ENST00000489072 GPN1Q9HCN4 374 aaPredicted RBP17.95■□□□□ 0.46
HMGN1-217ENST00000489072 UQCC1Q9NVA1 299 aa17.95■□□□□ 0.46
HMGN1-217ENST00000489072 WDR83OSQ9Y284 106 aa17.95■□□□□ 0.46
HMGN1-217ENST00000489072 VPS13DQ5THJ4 4388 aa17.95■□□□□ 0.46
HMGN1-217ENST00000489072 CXCL3P19876 107 aa17.94■□□□□ 0.46
HMGN1-217ENST00000489072 CNN1P51911 297 aaKnown RBP17.94■□□□□ 0.46
HMGN1-217ENST00000489072 C12orf74Q32Q52 190 aa17.94■□□□□ 0.46
HMGN1-217ENST00000489072 MORN5Q5VZ52 161 aa17.94■□□□□ 0.46
HMGN1-217ENST00000489072 ZNF767PQ75MW2 155 aa17.94■□□□□ 0.46
HMGN1-217ENST00000489072 COX7A2P2O60397 106 aa17.93■□□□□ 0.46
HMGN1-217ENST00000489072 MIC13Q5XKP0 118 aa17.93■□□□□ 0.46
HMGN1-217ENST00000489072 ZNF738Q8NE65 137 aa17.93■□□□□ 0.46
HMGN1-217ENST00000489072 TRAV10A0A0B4J240 114 aa17.92■□□□□ 0.46
HMGN1-217ENST00000489072 SMIM9A6NGZ8 99 aa17.92■□□□□ 0.46
HMGN1-217ENST00000489072 IGLL5B9A064 214 aa17.92■□□□□ 0.46
HMGN1-217ENST00000489072 DUSP14O95147 198 aaKnown RBP17.92■□□□□ 0.46
HMGN1-217ENST00000489072 SNRPCP09234 159 aaKnown RBP17.92■□□□□ 0.46
HMGN1-217ENST00000489072 PRR20EP86478 221 aa17.92■□□□□ 0.46
HMGN1-217ENST00000489072 PRR20CP86479 221 aa17.92■□□□□ 0.46
HMGN1-217ENST00000489072 PRR20DP86480 221 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms