RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 A6NHS1 94 aa12.85□□□□□ -0.35
ITGB1-215ENST00000488494 F6UB75 175 aa12.85□□□□□ -0.35
ITGB1-215ENST00000488494 HYPMO75409 117 aa12.85□□□□□ -0.35
ITGB1-215ENST00000488494 OR5G3P0C626 314 aa12.85□□□□□ -0.35
ITGB1-215ENST00000488494 CAV2P51636 162 aa12.85□□□□□ -0.35
ITGB1-215ENST00000488494 FXYD7P58549 80 aa12.85□□□□□ -0.35
ITGB1-215ENST00000488494 S100A10P60903 97 aa12.85□□□□□ -0.35
ITGB1-215ENST00000488494 TEPPQ6URK8 271 aa12.85□□□□□ -0.35
ITGB1-215ENST00000488494 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.85□□□□□ -0.35
ITGB1-215ENST00000488494 UHRF2Q96PU4 802 aa12.85□□□□□ -0.35
ITGB1-215ENST00000488494 NPVFQ9HCQ7 196 aa12.85□□□□□ -0.35
ITGB1-215ENST00000488494 PTTG2Q9NZH5 202 aa12.85□□□□□ -0.35
ITGB1-215ENST00000488494 UPK1BO75841 260 aa12.84□□□□□ -0.35
ITGB1-215ENST00000488494 LY6G6CO95867 125 aa12.84□□□□□ -0.35
ITGB1-215ENST00000488494 BCAP31P51572 246 aa12.84□□□□□ -0.35
ITGB1-215ENST00000488494 EBLN2Q6P2I7 272 aa12.84□□□□□ -0.35
ITGB1-215ENST00000488494 ZNF546Q86UE3 836 aa12.84□□□□□ -0.35
ITGB1-215ENST00000488494 OR4B1Q8NGF8 309 aa12.84□□□□□ -0.35
ITGB1-215ENST00000488494 ENKURQ8TC29 256 aa12.84□□□□□ -0.35
ITGB1-215ENST00000488494 C2orf50Q96LR7 162 aa12.84□□□□□ -0.35
ITGB1-215ENST00000488494 RPRMQ9NS64 109 aa12.84□□□□□ -0.35
ITGB1-215ENST00000488494 ELOA3CA0A087WX78 387 aaPredicted RBP12.83□□□□□ -0.36
ITGB1-215ENST00000488494 PLP1P60201 277 aa12.83□□□□□ -0.36
ITGB1-215ENST00000488494 ZNF709Q8N972 641 aa12.83□□□□□ -0.36
ITGB1-215ENST00000488494 GGACTQ9BVM4 153 aa12.83□□□□□ -0.36
ITGB1-215ENST00000488494 ARL6Q9H0F7 186 aa12.83□□□□□ -0.36
ITGB1-215ENST00000488494 HRH4Q9H3N8 390 aa12.83□□□□□ -0.36
ITGB1-215ENST00000488494 A0A0J9YX75 114 aa12.82□□□□□ -0.36
ITGB1-215ENST00000488494 DEDDO75618 318 aa12.82□□□□□ -0.36
ITGB1-215ENST00000488494 CST7O76096 145 aa12.82□□□□□ -0.36
ITGB1-215ENST00000488494 FGL1Q08830 312 aa12.82□□□□□ -0.36
ITGB1-215ENST00000488494 FAM78BQ5VT40 261 aa12.82□□□□□ -0.36
ITGB1-215ENST00000488494 SPATA31B1PQ5VZV4 182 aa12.82□□□□□ -0.36
ITGB1-215ENST00000488494 IGFL4Q6B9Z1 124 aa12.82□□□□□ -0.36
ITGB1-215ENST00000488494 RNF182Q8N6D2 247 aa12.82□□□□□ -0.36
ITGB1-215ENST00000488494 CLUHP3Q96NS8 147 aa12.82□□□□□ -0.36
ITGB1-215ENST00000488494 SLC35B3Q9H1N7 401 aa12.82□□□□□ -0.36
ITGB1-215ENST00000488494 C11orf1Q9H5F2 150 aa12.82□□□□□ -0.36
ITGB1-215ENST00000488494 GOSR2O14653 212 aa12.81□□□□□ -0.36
ITGB1-215ENST00000488494 AGPAT2O15120 278 aa12.81□□□□□ -0.36
ITGB1-215ENST00000488494 RPL7P18124 248 aaKnown RBP12.81□□□□□ -0.36
ITGB1-215ENST00000488494 PVALBP20472 110 aaPredicted RBP12.81□□□□□ -0.36
ITGB1-215ENST00000488494 PATE2Q6UY27 113 aa12.81□□□□□ -0.36
ITGB1-215ENST00000488494 MGST2Q99735 147 aa12.81□□□□□ -0.36
ITGB1-215ENST00000488494 CELA1Q9UNI1 258 aa12.81□□□□□ -0.36
ITGB1-215ENST00000488494 IGHV3OR16-12A0A075B7B8 117 aa12.8□□□□□ -0.36
ITGB1-215ENST00000488494 TRAV8-2A0A0B4J237 113 aa12.8□□□□□ -0.36
ITGB1-215ENST00000488494 FAM24AA6NFZ4 105 aa12.8□□□□□ -0.36
ITGB1-215ENST00000488494 HLA-DMBP28068 263 aa12.8□□□□□ -0.36
ITGB1-215ENST00000488494 PSG9Q00887 426 aa12.8□□□□□ -0.36
ITGB1-215ENST00000488494 IFITM3Q01628 133 aa12.8□□□□□ -0.36
ITGB1-215ENST00000488494 RAB32Q13637 225 aa12.8□□□□□ -0.36
ITGB1-215ENST00000488494 ZNF705AQ6ZN79 300 aaPredicted RBP12.8□□□□□ -0.36
ITGB1-215ENST00000488494 S100A7AQ86SG5 101 aa12.8□□□□□ -0.36
ITGB1-215ENST00000488494 ARV1Q9H2C2 271 aa12.8□□□□□ -0.36
ITGB1-215ENST00000488494 UBE2L5PA0A1B0GUS4 154 aa12.79□□□□□ -0.36
ITGB1-215ENST00000488494 IGSF23A1L1A6 192 aa12.79□□□□□ -0.36
ITGB1-215ENST00000488494 ZNF705FA8MVS1 300 aaPredicted RBP12.79□□□□□ -0.36
ITGB1-215ENST00000488494 COX7A2P2O60397 106 aa12.79□□□□□ -0.36
ITGB1-215ENST00000488494 ZNF705DP0CH99 300 aaPredicted RBP12.79□□□□□ -0.36
ITGB1-215ENST00000488494 ZNF705BP0CI00 300 aaPredicted RBP12.79□□□□□ -0.36
ITGB1-215ENST00000488494 PXDC1Q5TGL8 231 aa12.79□□□□□ -0.36
ITGB1-215ENST00000488494 Q6ZTC4 211 aa12.79□□□□□ -0.36
ITGB1-215ENST00000488494 ZNF738Q8NE65 137 aa12.79□□□□□ -0.36
ITGB1-215ENST00000488494 C2CD4CQ8TF44 421 aa12.79□□□□□ -0.36
ITGB1-215ENST00000488494 GPN1Q9HCN4 374 aaPredicted RBP12.79□□□□□ -0.36
ITGB1-215ENST00000488494 LYRM2Q9NU23 88 aaPredicted RBP12.79□□□□□ -0.36
ITGB1-215ENST00000488494 A0A087X0K7 114 aa12.78□□□□□ -0.36
ITGB1-215ENST00000488494 SULT1A1P50225 295 aa12.78□□□□□ -0.36
ITGB1-215ENST00000488494 IL15RAQ13261 267 aa12.78□□□□□ -0.36
ITGB1-215ENST00000488494 STX12Q86Y82 276 aa12.78□□□□□ -0.36
ITGB1-215ENST00000488494 UQCC1Q9NVA1 299 aa12.78□□□□□ -0.36
ITGB1-215ENST00000488494 A8MTW9 85 aa12.77□□□□□ -0.37
ITGB1-215ENST00000488494 C11orf94C9JXX5 98 aa12.77□□□□□ -0.37
ITGB1-215ENST00000488494 CAMLGP49069 296 aa12.77□□□□□ -0.37
ITGB1-215ENST00000488494 CNN1P51911 297 aaKnown RBP12.77□□□□□ -0.37
ITGB1-215ENST00000488494 ZNF767PQ75MW2 155 aa12.77□□□□□ -0.37
ITGB1-215ENST00000488494 LINC00305Q7Z4B0 112 aa12.77□□□□□ -0.37
ITGB1-215ENST00000488494 NRARPQ7Z6K4 114 aa12.77□□□□□ -0.37
ITGB1-215ENST00000488494 NEU1Q99519 415 aa12.77□□□□□ -0.37
ITGB1-215ENST00000488494 BIRC6Q9NR09 4857 aa12.76□□□□□ -0.37
ITGB1-215ENST00000488494 SIX6O95475 246 aa12.76□□□□□ -0.37
ITGB1-215ENST00000488494 EMP1P54849 157 aa12.76□□□□□ -0.37
ITGB1-215ENST00000488494 HBG1P69891 147 aa12.76□□□□□ -0.37
ITGB1-215ENST00000488494 HBG2P69892 147 aa12.76□□□□□ -0.37
ITGB1-215ENST00000488494 RAB31Q13636 194 aa12.76□□□□□ -0.37
ITGB1-215ENST00000488494 VWC2Q2TAL6 325 aa12.76□□□□□ -0.37
ITGB1-215ENST00000488494 MORN5Q5VZ52 161 aa12.76□□□□□ -0.37
ITGB1-215ENST00000488494 AMTNQ6UX39 209 aa12.76□□□□□ -0.37
ITGB1-215ENST00000488494 TMEM252Q8N6L7 170 aa12.76□□□□□ -0.37
ITGB1-215ENST00000488494 RNF24Q9Y225 148 aa12.76□□□□□ -0.37
ITGB1-215ENST00000488494 WDR83OSQ9Y284 106 aa12.76□□□□□ -0.37
ITGB1-215ENST00000488494 GOLT1BQ9Y3E0 138 aa12.76□□□□□ -0.37
ITGB1-215ENST00000488494 TRAV10A0A0B4J240 114 aa12.75□□□□□ -0.37
ITGB1-215ENST00000488494 IGLL5B9A064 214 aa12.75□□□□□ -0.37
ITGB1-215ENST00000488494 MRPS12O15235 138 aaKnown RBP12.75□□□□□ -0.37
ITGB1-215ENST00000488494 PRAF2O60831 178 aa12.75□□□□□ -0.37
ITGB1-215ENST00000488494 DUSP14O95147 198 aaKnown RBP12.75□□□□□ -0.37
ITGB1-215ENST00000488494 CXCL3P19876 107 aa12.75□□□□□ -0.37
ITGB1-215ENST00000488494 BAXQ07812 192 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms