RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 DEFB131AP59861 70 aa10.88□□□□□ -0.67
LIMS3-205ENST00000487150 ZNF266Q14584 549 aa10.88□□□□□ -0.67
LIMS3-205ENST00000487150 HAGHQ16775 308 aa10.88□□□□□ -0.67
LIMS3-205ENST00000487150 LINC00322Q6ZN03 302 aaPredicted RBP10.88□□□□□ -0.67
LIMS3-205ENST00000487150 TMEM182Q6ZP80 229 aaPredicted RBP10.88□□□□□ -0.67
LIMS3-205ENST00000487150 INO80EQ8NBZ0 244 aaPredicted RBP10.88□□□□□ -0.67
LIMS3-205ENST00000487150 SCGB1C1Q8TD33 95 aa10.88□□□□□ -0.67
LIMS3-205ENST00000487150 GATAD1Q8WUU5 269 aa10.88□□□□□ -0.67
LIMS3-205ENST00000487150 AQP10Q96PS8 301 aa10.88□□□□□ -0.67
LIMS3-205ENST00000487150 ASCL2Q99929 193 aa10.88□□□□□ -0.67
LIMS3-205ENST00000487150 SCRT1Q9BWW7 348 aa10.88□□□□□ -0.67
LIMS3-205ENST00000487150 PARD6GQ9BYG4 376 aaPredicted RBP10.88□□□□□ -0.67
LIMS3-205ENST00000487150 WDR61Q9GZS3 305 aaKnown RBP10.88□□□□□ -0.67
LIMS3-205ENST00000487150 SLC25A32Q9H2D1 315 aa10.88□□□□□ -0.67
LIMS3-205ENST00000487150 PXMP4Q9Y6I8 212 aa10.88□□□□□ -0.67
LIMS3-205ENST00000487150 U3KQK5 164 aa10.88□□□□□ -0.67
LIMS3-205ENST00000487150 RBMY1BA6NDE4 496 aaKnown RBP10.87□□□□□ -0.67
LIMS3-205ENST00000487150 RBMY1EA6NEQ0 496 aaKnown RBP10.87□□□□□ -0.67
LIMS3-205ENST00000487150 RBMY1DP0C7P1 496 aaKnown RBP10.87□□□□□ -0.67
LIMS3-205ENST00000487150 LINC00305Q7Z4B0 112 aa10.87□□□□□ -0.67
LIMS3-205ENST00000487150 STHQ8IWL8 128 aa10.87□□□□□ -0.67
LIMS3-205ENST00000487150 OR2T35Q8NGX2 323 aa10.87□□□□□ -0.67
LIMS3-205ENST00000487150 DNAJC4Q9NNZ3 241 aa10.87□□□□□ -0.67
LIMS3-205ENST00000487150 CXCL2P19875 107 aa10.86□□□□□ -0.67
LIMS3-205ENST00000487150 TMEM41BQ5BJD5 291 aa10.86□□□□□ -0.67
LIMS3-205ENST00000487150 PSMG4Q5JS54 123 aa10.86□□□□□ -0.67
LIMS3-205ENST00000487150 SPATA31B1PQ5VZV4 182 aa10.86□□□□□ -0.67
LIMS3-205ENST00000487150 MIC13Q5XKP0 118 aa10.86□□□□□ -0.67
LIMS3-205ENST00000487150 BPIFA4PQ86YQ2 179 aa10.86□□□□□ -0.67
LIMS3-205ENST00000487150 UHRF2Q96PU4 802 aa10.86□□□□□ -0.67
LIMS3-205ENST00000487150 A0A087X0K7 114 aa10.85□□□□□ -0.67
LIMS3-205ENST00000487150 NUTF2P61970 127 aaKnown RBP10.85□□□□□ -0.67
LIMS3-205ENST00000487150 Q6ZWC4 215 aa10.85□□□□□ -0.67
LIMS3-205ENST00000487150 APRG1Q8IVJ8 170 aa10.85□□□□□ -0.67
LIMS3-205ENST00000487150 C16orf92Q96LL3 132 aa10.85□□□□□ -0.67
LIMS3-205ENST00000487150 RSG1Q9BU20 258 aa10.85□□□□□ -0.67
LIMS3-205ENST00000487150 FXYD6-FXYD2A0A087WZ82 144 aa10.84□□□□□ -0.67
LIMS3-205ENST00000487150 SPP1P10451 314 aa10.84□□□□□ -0.67
LIMS3-205ENST00000487150 GUK1Q16774 197 aa10.84□□□□□ -0.67
LIMS3-205ENST00000487150 LEMD1Q68G75 181 aa10.84□□□□□ -0.67
LIMS3-205ENST00000487150 MORN3Q6PF18 240 aaPredicted RBP10.84□□□□□ -0.67
LIMS3-205ENST00000487150 LCN15Q6UWW0 184 aa10.84□□□□□ -0.67
LIMS3-205ENST00000487150 FAM24BQ8N5W8 94 aa10.84□□□□□ -0.67
LIMS3-205ENST00000487150 RCHY1Q96PM5 261 aa10.84□□□□□ -0.67
LIMS3-205ENST00000487150 CITED4Q96RK1 184 aa10.84□□□□□ -0.67
LIMS3-205ENST00000487150 CLEC5AQ9NY25 188 aa10.84□□□□□ -0.67
LIMS3-205ENST00000487150 TP53TG1Q9Y2A0 90 aa10.84□□□□□ -0.67
LIMS3-205ENST00000487150 SOCS3O14543 225 aa10.83□□□□□ -0.68
LIMS3-205ENST00000487150 PATE2Q6UY27 113 aa10.83□□□□□ -0.68
LIMS3-205ENST00000487150 FOXI2Q6ZQN5 318 aa10.83□□□□□ -0.68
LIMS3-205ENST00000487150 LRRC20Q8TCA0 184 aa10.83□□□□□ -0.68
LIMS3-205ENST00000487150 TMEM37Q8WXS4 190 aa10.83□□□□□ -0.68
LIMS3-205ENST00000487150 SLC50A1Q9BRV3 221 aa10.83□□□□□ -0.68
LIMS3-205ENST00000487150 MRPL32Q9BYC8 188 aaKnown RBP10.83□□□□□ -0.68
LIMS3-205ENST00000487150 SMIM3Q9BZL3 60 aa10.83□□□□□ -0.68
LIMS3-205ENST00000487150 CSTL1Q9H114 145 aa10.83□□□□□ -0.68
LIMS3-205ENST00000487150 RPRMQ9NS64 109 aa10.83□□□□□ -0.68
LIMS3-205ENST00000487150 BORCS7-ASMTA0A0B4J1R7 106 aa10.82□□□□□ -0.68
LIMS3-205ENST00000487150 RPL35AP18077 110 aaKnown RBP10.82□□□□□ -0.68
LIMS3-205ENST00000487150 ACTL10Q5JWF8 245 aa10.82□□□□□ -0.68
LIMS3-205ENST00000487150 EBLN2Q6P2I7 272 aa10.82□□□□□ -0.68
LIMS3-205ENST00000487150 LINC00052Q96N35 136 aa10.82□□□□□ -0.68
LIMS3-205ENST00000487150 TNFSF18Q9UNG2 199 aa10.82□□□□□ -0.68
LIMS3-205ENST00000487150 TIMM9Q9Y5J7 89 aa10.82□□□□□ -0.68
LIMS3-205ENST00000487150 HLA-DRB4P13762 266 aa10.81□□□□□ -0.68
LIMS3-205ENST00000487150 TAS2R45P59539 299 aa10.81□□□□□ -0.68
LIMS3-205ENST00000487150 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.81□□□□□ -0.68
LIMS3-205ENST00000487150 TRPT1Q86TN4 253 aaKnown RBP10.81□□□□□ -0.68
LIMS3-205ENST00000487150 C1QTNF4Q9BXJ3 329 aa10.81□□□□□ -0.68
LIMS3-205ENST00000487150 HRH4Q9H3N8 390 aa10.81□□□□□ -0.68
LIMS3-205ENST00000487150 HLA-DRB4X5D2U9 266 aa10.81□□□□□ -0.68
LIMS3-205ENST00000487150 TAAR5O14804 337 aa10.8□□□□□ -0.68
LIMS3-205ENST00000487150 ZNF253O75346 499 aa10.8□□□□□ -0.68
LIMS3-205ENST00000487150 FAM78BQ5VT40 261 aa10.8□□□□□ -0.68
LIMS3-205ENST00000487150 WWC2-AS2Q96NR7 200 aa10.8□□□□□ -0.68
LIMS3-205ENST00000487150 CLUHP3Q96NS8 147 aa10.8□□□□□ -0.68
LIMS3-205ENST00000487150 TMEM14CQ9P0S9 112 aa10.8□□□□□ -0.68
LIMS3-205ENST00000487150 CA1P00915 261 aaPredicted RBP10.79□□□□□ -0.68
LIMS3-205ENST00000487150 RHOBP62745 196 aa10.79□□□□□ -0.68
LIMS3-205ENST00000487150 PDE6HQ13956 83 aa10.79□□□□□ -0.68
LIMS3-205ENST00000487150 ACOT6Q3I5F7 207 aaPredicted RBP10.79□□□□□ -0.68
LIMS3-205ENST00000487150 FFAR4Q5NUL3 377 aa10.79□□□□□ -0.68
LIMS3-205ENST00000487150 GNPNAT1Q96EK6 184 aaPredicted RBP10.79□□□□□ -0.68
LIMS3-205ENST00000487150 SAV1Q9H4B6 383 aaPredicted RBP10.79□□□□□ -0.68
LIMS3-205ENST00000487150 RNF222A6NCQ9 220 aa10.78□□□□□ -0.68
LIMS3-205ENST00000487150 KNCNA6PVL3 124 aa10.78□□□□□ -0.68
LIMS3-205ENST00000487150 H3BMM0 161 aa10.78□□□□□ -0.68
LIMS3-205ENST00000487150 MRPS12O15235 138 aaKnown RBP10.78□□□□□ -0.68
LIMS3-205ENST00000487150 SPRY2O43597 315 aa10.78□□□□□ -0.68
LIMS3-205ENST00000487150 DUSP14O95147 198 aaKnown RBP10.78□□□□□ -0.68
LIMS3-205ENST00000487150 MBP02144 154 aa10.78□□□□□ -0.68
LIMS3-205ENST00000487150 IGLC2P0DOY2 106 aa10.78□□□□□ -0.68
LIMS3-205ENST00000487150 ZNF345Q14585 488 aa10.78□□□□□ -0.68
LIMS3-205ENST00000487150 ZNF124Q15973 351 aa10.78□□□□□ -0.68
LIMS3-205ENST00000487150 KHDC3LQ587J8 217 aa10.78□□□□□ -0.68
LIMS3-205ENST00000487150 Q5BKY6 102 aa10.78□□□□□ -0.68
LIMS3-205ENST00000487150 ZNF738Q8NE65 137 aa10.78□□□□□ -0.68
LIMS3-205ENST00000487150 PSMG3Q9BT73 122 aaPredicted RBP10.78□□□□□ -0.68
LIMS3-205ENST00000487150 FUT9Q9Y231 359 aa10.78□□□□□ -0.68
LIMS3-205ENST00000487150 BOLA1Q9Y3E2 137 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms