RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 SLC25A39Q9BZJ4 359 aaPredicted RBP13.31□□□□□ -0.28
CLDN11-206ENST00000486429 KLK5Q9Y337 293 aaPredicted RBP13.31□□□□□ -0.28
CLDN11-206ENST00000486429 DNAH1Q9P2D7 4330 aa13.3□□□□□ -0.28
CLDN11-206ENST00000486429 DEDDO75618 318 aa13.3□□□□□ -0.28
CLDN11-206ENST00000486429 SPATA31B1PQ5VZV4 182 aa13.3□□□□□ -0.28
CLDN11-206ENST00000486429 CSNK1G2-AS1Q8NCQ2 148 aa13.3□□□□□ -0.28
CLDN11-206ENST00000486429 PHLDA1Q8WV24 401 aaPredicted RBP13.3□□□□□ -0.28
CLDN11-206ENST00000486429 GPN1Q9HCN4 374 aaPredicted RBP13.3□□□□□ -0.28
CLDN11-206ENST00000486429 XCL2Q9UBD3 114 aa13.3□□□□□ -0.28
CLDN11-206ENST00000486429 X6R8D5 127 aa13.3□□□□□ -0.28
CLDN11-206ENST00000486429 IGKV3-20P01619 116 aa13.29□□□□□ -0.28
CLDN11-206ENST00000486429 RPL7P18124 248 aaKnown RBP13.29□□□□□ -0.28
CLDN11-206ENST00000486429 NANOS2P60321 138 aaKnown RBP13.29□□□□□ -0.28
CLDN11-206ENST00000486429 EBLN2Q6P2I7 272 aa13.29□□□□□ -0.28
CLDN11-206ENST00000486429 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.29□□□□□ -0.28
CLDN11-206ENST00000486429 UHRF2Q96PU4 802 aa13.29□□□□□ -0.28
CLDN11-206ENST00000486429 ARL6Q9H0F7 186 aa13.29□□□□□ -0.28
CLDN11-206ENST00000486429 C11orf1Q9H5F2 150 aa13.29□□□□□ -0.28
CLDN11-206ENST00000486429 RPRMQ9NS64 109 aa13.29□□□□□ -0.28
CLDN11-206ENST00000486429 PLECQ15149 4684 aaKnown RBP13.28□□□□□ -0.28
CLDN11-206ENST00000486429 GOSR2O14653 212 aa13.28□□□□□ -0.28
CLDN11-206ENST00000486429 AGPAT2O15120 278 aa13.28□□□□□ -0.28
CLDN11-206ENST00000486429 CST7O76096 145 aa13.28□□□□□ -0.28
CLDN11-206ENST00000486429 IFITM3Q01628 133 aa13.28□□□□□ -0.28
CLDN11-206ENST00000486429 RAB32Q13637 225 aa13.28□□□□□ -0.28
CLDN11-206ENST00000486429 PXDC1Q5TGL8 231 aa13.28□□□□□ -0.28
CLDN11-206ENST00000486429 CLUHP3Q96NS8 147 aa13.28□□□□□ -0.28
CLDN11-206ENST00000486429 ARV1Q9H2C2 271 aa13.28□□□□□ -0.28
CLDN11-206ENST00000486429 FAM24AA6NFZ4 105 aa13.27□□□□□ -0.29
CLDN11-206ENST00000486429 F6UB75 175 aa13.27□□□□□ -0.29
CLDN11-206ENST00000486429 PRAF2O60831 178 aa13.27□□□□□ -0.29
CLDN11-206ENST00000486429 RBMY1A1P0DJD3 496 aaKnown RBP13.27□□□□□ -0.29
CLDN11-206ENST00000486429 RBMY1CP0DJD4 496 aa13.27□□□□□ -0.29
CLDN11-206ENST00000486429 FGL1Q08830 312 aa13.27□□□□□ -0.29
CLDN11-206ENST00000486429 RBMY1FQ15415 496 aaKnown RBP13.27□□□□□ -0.29
CLDN11-206ENST00000486429 OR4B1Q8NGF8 309 aa13.27□□□□□ -0.29
CLDN11-206ENST00000486429 LINC00476Q8WZB0 136 aa13.27□□□□□ -0.29
CLDN11-206ENST00000486429 C20orf173Q96LM9 149 aa13.27□□□□□ -0.29
CLDN11-206ENST00000486429 C17orf77Q96MU5 243 aa13.27□□□□□ -0.29
CLDN11-206ENST00000486429 MGST2Q99735 147 aa13.27□□□□□ -0.29
CLDN11-206ENST00000486429 LYRM2Q9NU23 88 aaPredicted RBP13.27□□□□□ -0.29
CLDN11-206ENST00000486429 RNF24Q9Y225 148 aa13.27□□□□□ -0.29
CLDN11-206ENST00000486429 A0A0J9YX75 114 aa13.26□□□□□ -0.29
CLDN11-206ENST00000486429 IL15RAQ13261 267 aa13.26□□□□□ -0.29
CLDN11-206ENST00000486429 NRARPQ7Z6K4 114 aa13.26□□□□□ -0.29
CLDN11-206ENST00000486429 STX12Q86Y82 276 aa13.26□□□□□ -0.29
CLDN11-206ENST00000486429 HRH4Q9H3N8 390 aa13.26□□□□□ -0.29
CLDN11-206ENST00000486429 UQCC1Q9NVA1 299 aa13.26□□□□□ -0.29
CLDN11-206ENST00000486429 COX7A2P2O60397 106 aa13.25□□□□□ -0.29
CLDN11-206ENST00000486429 CAMLGP49069 296 aa13.25□□□□□ -0.29
CLDN11-206ENST00000486429 SULT1A1P50225 295 aa13.25□□□□□ -0.29
CLDN11-206ENST00000486429 FXYD7P58549 80 aa13.25□□□□□ -0.29
CLDN11-206ENST00000486429 DEFA1P59665 94 aa13.25□□□□□ -0.29
CLDN11-206ENST00000486429 DEFA3P59666 94 aa13.25□□□□□ -0.29
CLDN11-206ENST00000486429 RAB31Q13636 194 aa13.25□□□□□ -0.29
CLDN11-206ENST00000486429 FAM78BQ5VT40 261 aa13.25□□□□□ -0.29
CLDN11-206ENST00000486429 A0A087X0K7 114 aa13.24□□□□□ -0.29
CLDN11-206ENST00000486429 UBE2L5PA0A1B0GUS4 154 aa13.24□□□□□ -0.29
CLDN11-206ENST00000486429 IGSF23A1L1A6 192 aa13.24□□□□□ -0.29
CLDN11-206ENST00000486429 INMT-MINDY4F8WBC2 141 aa13.24□□□□□ -0.29
CLDN11-206ENST00000486429 HBG1P69891 147 aa13.24□□□□□ -0.29
CLDN11-206ENST00000486429 HBG2P69892 147 aa13.24□□□□□ -0.29
CLDN11-206ENST00000486429 PSG9Q00887 426 aa13.24□□□□□ -0.29
CLDN11-206ENST00000486429 PATE2Q6UY27 113 aa13.24□□□□□ -0.29
CLDN11-206ENST00000486429 TMEM252Q8N6L7 170 aa13.24□□□□□ -0.29
CLDN11-206ENST00000486429 ZNF709Q8N972 641 aa13.24□□□□□ -0.29
CLDN11-206ENST00000486429 SLC35B3Q9H1N7 401 aa13.24□□□□□ -0.29
CLDN11-206ENST00000486429 WDR83OSQ9Y284 106 aa13.24□□□□□ -0.29
CLDN11-206ENST00000486429 TRAV8-2A0A0B4J237 113 aa13.23□□□□□ -0.29
CLDN11-206ENST00000486429 VWC2Q2TAL6 325 aa13.23□□□□□ -0.29
CLDN11-206ENST00000486429 ZNF705AQ6ZN79 300 aaPredicted RBP13.23□□□□□ -0.29
CLDN11-206ENST00000486429 LINC00305Q7Z4B0 112 aa13.23□□□□□ -0.29
CLDN11-206ENST00000486429 RNF182Q8N6D2 247 aa13.23□□□□□ -0.29
CLDN11-206ENST00000486429 ZNF738Q8NE65 137 aa13.23□□□□□ -0.29
CLDN11-206ENST00000486429 ELOA3CA0A087WX78 387 aaPredicted RBP13.22□□□□□ -0.29
CLDN11-206ENST00000486429 SIX6O95475 246 aa13.22□□□□□ -0.29
CLDN11-206ENST00000486429 LY6G6CO95867 125 aa13.22□□□□□ -0.29
CLDN11-206ENST00000486429 S100A11P31949 105 aa13.22□□□□□ -0.29
CLDN11-206ENST00000486429 BAXQ07812 192 aa13.22□□□□□ -0.29
CLDN11-206ENST00000486429 IGFL4Q6B9Z1 124 aa13.22□□□□□ -0.29
CLDN11-206ENST00000486429 LRRC20Q8TCA0 184 aa13.22□□□□□ -0.29
CLDN11-206ENST00000486429 IGHV3OR16-12A0A075B7B8 117 aa13.21□□□□□ -0.29
CLDN11-206ENST00000486429 A8MTW9 85 aa13.21□□□□□ -0.29
CLDN11-206ENST00000486429 ZNF705FA8MVS1 300 aaPredicted RBP13.21□□□□□ -0.29
CLDN11-206ENST00000486429 C11orf94C9JXX5 98 aa13.21□□□□□ -0.29
CLDN11-206ENST00000486429 DUSP14O95147 198 aaKnown RBP13.21□□□□□ -0.29
CLDN11-206ENST00000486429 ZNF705DP0CH99 300 aaPredicted RBP13.21□□□□□ -0.29
CLDN11-206ENST00000486429 ZNF705BP0CI00 300 aaPredicted RBP13.21□□□□□ -0.29
CLDN11-206ENST00000486429 HLA-DMBP28068 263 aa13.21□□□□□ -0.29
CLDN11-206ENST00000486429 C10orf113Q5VZT2 155 aa13.21□□□□□ -0.29
CLDN11-206ENST00000486429 Q6ZRG5 221 aa13.21□□□□□ -0.29
CLDN11-206ENST00000486429 NEU1Q99519 415 aa13.21□□□□□ -0.29
CLDN11-206ENST00000486429 MARVELD1Q9BSK0 173 aa13.21□□□□□ -0.29
CLDN11-206ENST00000486429 GOLT1BQ9Y3E0 138 aa13.21□□□□□ -0.29
CLDN11-206ENST00000486429 MRPS12O15235 138 aaKnown RBP13.2□□□□□ -0.3
CLDN11-206ENST00000486429 CXCL2P19875 107 aa13.2□□□□□ -0.3
CLDN11-206ENST00000486429 CXCL3P19876 107 aa13.2□□□□□ -0.3
CLDN11-206ENST00000486429 CNN1P51911 297 aaKnown RBP13.2□□□□□ -0.3
CLDN11-206ENST00000486429 PRR20EP86478 221 aa13.2□□□□□ -0.3
CLDN11-206ENST00000486429 PRR20CP86479 221 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms