RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 SOCS3O14543 225 aa9.38□□□□□ -0.91
CHMP3-208ENST00000486404 GOSR2O14653 212 aa9.38□□□□□ -0.91
CHMP3-208ENST00000486404 GIG44P09565 113 aaPredicted RBP9.38□□□□□ -0.91
CHMP3-208ENST00000486404 RPL7P18124 248 aaKnown RBP9.38□□□□□ -0.91
CHMP3-208ENST00000486404 NANOS2P60321 138 aaKnown RBP9.38□□□□□ -0.91
CHMP3-208ENST00000486404 FGL1Q08830 312 aa9.38□□□□□ -0.91
CHMP3-208ENST00000486404 SPATA31B1PQ5VZV4 182 aa9.38□□□□□ -0.91
CHMP3-208ENST00000486404 TMEM182Q6ZP80 229 aaPredicted RBP9.38□□□□□ -0.91
CHMP3-208ENST00000486404 STX12Q86Y82 276 aa9.38□□□□□ -0.91
CHMP3-208ENST00000486404 Q8NAQ8 132 aa9.38□□□□□ -0.91
CHMP3-208ENST00000486404 OR4B1Q8NGF8 309 aa9.38□□□□□ -0.91
CHMP3-208ENST00000486404 PHLDA1Q8WV24 401 aaPredicted RBP9.38□□□□□ -0.91
CHMP3-208ENST00000486404 SHANK2-AS3Q9BTD1 123 aa9.38□□□□□ -0.91
CHMP3-208ENST00000486404 SLC25A39Q9BZJ4 359 aaPredicted RBP9.38□□□□□ -0.91
CHMP3-208ENST00000486404 ARL6Q9H0F7 186 aa9.38□□□□□ -0.91
CHMP3-208ENST00000486404 SAV1Q9H4B6 383 aaPredicted RBP9.38□□□□□ -0.91
CHMP3-208ENST00000486404 XCL2Q9UBD3 114 aa9.38□□□□□ -0.91
CHMP3-208ENST00000486404 COX7A2P2O60397 106 aa9.37□□□□□ -0.91
CHMP3-208ENST00000486404 DEFA1P59665 94 aa9.37□□□□□ -0.91
CHMP3-208ENST00000486404 DEFA3P59666 94 aa9.37□□□□□ -0.91
CHMP3-208ENST00000486404 DEFB1P60022 68 aa9.37□□□□□ -0.91
CHMP3-208ENST00000486404 RAB31Q13636 194 aa9.37□□□□□ -0.91
CHMP3-208ENST00000486404 PXDC1Q5TGL8 231 aa9.37□□□□□ -0.91
CHMP3-208ENST00000486404 GDF5OSQ5U4N7 250 aa9.37□□□□□ -0.91
CHMP3-208ENST00000486404 UHRF2Q96PU4 802 aa9.37□□□□□ -0.91
CHMP3-208ENST00000486404 UBE2L5PA0A1B0GUS4 154 aa9.36□□□□□ -0.91
CHMP3-208ENST00000486404 ZNF705EA8MWA4 302 aaPredicted RBP9.36□□□□□ -0.91
CHMP3-208ENST00000486404 AGPAT2O15120 278 aa9.36□□□□□ -0.91
CHMP3-208ENST00000486404 DEDDO75618 318 aa9.36□□□□□ -0.91
CHMP3-208ENST00000486404 CST7O76096 145 aa9.36□□□□□ -0.91
CHMP3-208ENST00000486404 FXYD7P58549 80 aa9.36□□□□□ -0.91
CHMP3-208ENST00000486404 HBG1P69891 147 aa9.36□□□□□ -0.91
CHMP3-208ENST00000486404 HBG2P69892 147 aa9.36□□□□□ -0.91
CHMP3-208ENST00000486404 PRR20EP86478 221 aa9.36□□□□□ -0.91
CHMP3-208ENST00000486404 PRR20CP86479 221 aa9.36□□□□□ -0.91
CHMP3-208ENST00000486404 PRR20DP86480 221 aa9.36□□□□□ -0.91
CHMP3-208ENST00000486404 PRR20BP86481 221 aa9.36□□□□□ -0.91
CHMP3-208ENST00000486404 PRR20AP86496 221 aa9.36□□□□□ -0.91
CHMP3-208ENST00000486404 ARL16Q0P5N6 197 aa9.36□□□□□ -0.91
CHMP3-208ENST00000486404 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.36□□□□□ -0.91
CHMP3-208ENST00000486404 LRRC20Q8TCA0 184 aa9.36□□□□□ -0.91
CHMP3-208ENST00000486404 LINC00476Q8WZB0 136 aa9.36□□□□□ -0.91
CHMP3-208ENST00000486404 UQCC1Q9NVA1 299 aa9.36□□□□□ -0.91
CHMP3-208ENST00000486404 X6R8D5 127 aa9.36□□□□□ -0.91
CHMP3-208ENST00000486404 IGHV3OR16-12A0A075B7B8 117 aa9.35□□□□□ -0.91
CHMP3-208ENST00000486404 F6UB75 175 aa9.35□□□□□ -0.91
CHMP3-208ENST00000486404 PRAF2O60831 178 aa9.35□□□□□ -0.91
CHMP3-208ENST00000486404 LY6G6CO95867 125 aa9.35□□□□□ -0.91
CHMP3-208ENST00000486404 CAMLGP49069 296 aa9.35□□□□□ -0.91
CHMP3-208ENST00000486404 SULT1A1P50225 295 aa9.35□□□□□ -0.91
CHMP3-208ENST00000486404 PLP1P60201 277 aa9.35□□□□□ -0.91
CHMP3-208ENST00000486404 PSG9Q00887 426 aa9.35□□□□□ -0.91
CHMP3-208ENST00000486404 BAXQ07812 192 aa9.35□□□□□ -0.91
CHMP3-208ENST00000486404 RAB32Q13637 225 aa9.35□□□□□ -0.91
CHMP3-208ENST00000486404 FAM78BQ5VT40 261 aa9.35□□□□□ -0.91
CHMP3-208ENST00000486404 CSNK1G2-AS1Q8NCQ2 148 aa9.35□□□□□ -0.91
CHMP3-208ENST00000486404 ZNF738Q8NE65 137 aa9.35□□□□□ -0.91
CHMP3-208ENST00000486404 C20orf173Q96LM9 149 aa9.35□□□□□ -0.91
CHMP3-208ENST00000486404 MGST2Q99735 147 aa9.35□□□□□ -0.91
CHMP3-208ENST00000486404 ARV1Q9H2C2 271 aa9.35□□□□□ -0.91
CHMP3-208ENST00000486404 LYRM2Q9NU23 88 aaPredicted RBP9.35□□□□□ -0.91
CHMP3-208ENST00000486404 A0A0J9YX75 114 aa9.34□□□□□ -0.91
CHMP3-208ENST00000486404 FAM24AA6NFZ4 105 aa9.34□□□□□ -0.91
CHMP3-208ENST00000486404 LINC00305Q7Z4B0 112 aa9.34□□□□□ -0.91
CHMP3-208ENST00000486404 NRARPQ7Z6K4 114 aa9.34□□□□□ -0.91
CHMP3-208ENST00000486404 RNF182Q8N6D2 247 aa9.34□□□□□ -0.91
CHMP3-208ENST00000486404 HRH4Q9H3N8 390 aa9.34□□□□□ -0.91
CHMP3-208ENST00000486404 BATF3Q9NR55 127 aa9.34□□□□□ -0.91
CHMP3-208ENST00000486404 GOLT1BQ9Y3E0 138 aa9.34□□□□□ -0.91
CHMP3-208ENST00000486404 ALMS1Q8TCU4 4167 aa9.34□□□□□ -0.91
CHMP3-208ENST00000486404 A0A087X0K7 114 aa9.33□□□□□ -0.92
CHMP3-208ENST00000486404 C11orf94C9JXX5 98 aa9.33□□□□□ -0.92
CHMP3-208ENST00000486404 INMT-MINDY4F8WBC2 141 aa9.33□□□□□ -0.92
CHMP3-208ENST00000486404 DUSP14O95147 198 aaKnown RBP9.33□□□□□ -0.92
CHMP3-208ENST00000486404 RBMY1A1P0DJD3 496 aaKnown RBP9.33□□□□□ -0.92
CHMP3-208ENST00000486404 RBMY1CP0DJD4 496 aa9.33□□□□□ -0.92
CHMP3-208ENST00000486404 RBMY1FQ15415 496 aaKnown RBP9.33□□□□□ -0.92
CHMP3-208ENST00000486404 C10orf113Q5VZT2 155 aa9.33□□□□□ -0.92
CHMP3-208ENST00000486404 Q6ZRG5 221 aa9.33□□□□□ -0.92
CHMP3-208ENST00000486404 C2CD4CQ8TF44 421 aa9.33□□□□□ -0.92
CHMP3-208ENST00000486404 CLUHP3Q96NS8 147 aa9.33□□□□□ -0.92
CHMP3-208ENST00000486404 SLC35B3Q9H1N7 401 aa9.33□□□□□ -0.92
CHMP3-208ENST00000486404 ELOA3CA0A087WX78 387 aaPredicted RBP9.32□□□□□ -0.92
CHMP3-208ENST00000486404 IGSF23A1L1A6 192 aa9.32□□□□□ -0.92
CHMP3-208ENST00000486404 SSNA1O43805 119 aa9.32□□□□□ -0.92
CHMP3-208ENST00000486404 RLN2P04090 185 aa9.32□□□□□ -0.92
CHMP3-208ENST00000486404 HLA-DMBP28068 263 aa9.32□□□□□ -0.92
CHMP3-208ENST00000486404 S100A11P31949 105 aa9.32□□□□□ -0.92
CHMP3-208ENST00000486404 LRRC37A5PQ49AS3 106 aa9.32□□□□□ -0.92
CHMP3-208ENST00000486404 IGFL4Q6B9Z1 124 aa9.32□□□□□ -0.92
CHMP3-208ENST00000486404 LCN15Q6UWW0 184 aa9.32□□□□□ -0.92
CHMP3-208ENST00000486404 BPIFA4PQ86YQ2 179 aa9.32□□□□□ -0.92
CHMP3-208ENST00000486404 TMEM252Q8N6L7 170 aa9.32□□□□□ -0.92
CHMP3-208ENST00000486404 ZNF709Q8N972 641 aa9.32□□□□□ -0.92
CHMP3-208ENST00000486404 OR1L4Q8NGR5 311 aa9.32□□□□□ -0.92
CHMP3-208ENST00000486404 PFDN5Q99471 154 aa9.32□□□□□ -0.92
CHMP3-208ENST00000486404 TMEM208Q9BTX3 173 aa9.32□□□□□ -0.92
CHMP3-208ENST00000486404 C11orf1Q9H5F2 150 aa9.32□□□□□ -0.92
CHMP3-208ENST00000486404 SACSQ9NZJ4 4579 aa9.31□□□□□ -0.92
CHMP3-208ENST00000486404 TRAV8-2A0A0B4J237 113 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms