RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 GPR82Q96P67 336 aa8.84□□□□□ -0.99
HLA-DOA-204ENST00000485901 MGST2Q99735 147 aa8.84□□□□□ -0.99
HLA-DOA-204ENST00000485901 SLC25A39Q9BZJ4 359 aaPredicted RBP8.84□□□□□ -0.99
HLA-DOA-204ENST00000485901 ARL6Q9H0F7 186 aa8.84□□□□□ -0.99
HLA-DOA-204ENST00000485901 CSTL1Q9H114 145 aa8.84□□□□□ -0.99
HLA-DOA-204ENST00000485901 SLC25A22Q9H936 323 aa8.84□□□□□ -0.99
HLA-DOA-204ENST00000485901 ELOA3CA0A087WX78 387 aaPredicted RBP8.83□□□□□ -1
HLA-DOA-204ENST00000485901 MPDU1O75352 247 aa8.83□□□□□ -1
HLA-DOA-204ENST00000485901 ID1P41134 155 aa8.83□□□□□ -1
HLA-DOA-204ENST00000485901 PSMG4Q5JS54 123 aa8.83□□□□□ -1
HLA-DOA-204ENST00000485901 Q6ZWC4 215 aa8.83□□□□□ -1
HLA-DOA-204ENST00000485901 STHQ8IWL8 128 aa8.83□□□□□ -1
HLA-DOA-204ENST00000485901 CHAC2Q8WUX2 184 aa8.83□□□□□ -1
HLA-DOA-204ENST00000485901 LINC00476Q8WZB0 136 aa8.83□□□□□ -1
HLA-DOA-204ENST00000485901 SHANK2-AS3Q9BTD1 123 aa8.83□□□□□ -1
HLA-DOA-204ENST00000485901 FRAS1Q86XX4 4008 aa8.83□□□□□ -1
HLA-DOA-204ENST00000485901 UBE2L5PA0A1B0GUS4 154 aa8.82□□□□□ -1
HLA-DOA-204ENST00000485901 H3BRN7 92 aa8.82□□□□□ -1
HLA-DOA-204ENST00000485901 RPL7P18124 248 aaKnown RBP8.82□□□□□ -1
HLA-DOA-204ENST00000485901 CXCL3P19876 107 aa8.82□□□□□ -1
HLA-DOA-204ENST00000485901 RPL29P47914 159 aaKnown RBP8.82□□□□□ -1
HLA-DOA-204ENST00000485901 MEOX2P50222 304 aa8.82□□□□□ -1
HLA-DOA-204ENST00000485901 OXA1LQ15070 435 aa8.82□□□□□ -1
HLA-DOA-204ENST00000485901 FCN2Q15485 313 aa8.82□□□□□ -1
HLA-DOA-204ENST00000485901 PATE2Q6UY27 113 aa8.82□□□□□ -1
HLA-DOA-204ENST00000485901 OR5C1Q8NGR4 320 aa8.82□□□□□ -1
HLA-DOA-204ENST00000485901 RSG1Q9BU20 258 aa8.82□□□□□ -1
HLA-DOA-204ENST00000485901 ARV1Q9H2C2 271 aa8.82□□□□□ -1
HLA-DOA-204ENST00000485901 SLC25A32Q9H2D1 315 aa8.82□□□□□ -1
HLA-DOA-204ENST00000485901 DNAJC4Q9NNZ3 241 aa8.82□□□□□ -1
HLA-DOA-204ENST00000485901 NUPR2A6NF83 97 aa8.81□□□□□ -1
HLA-DOA-204ENST00000485901 ISLRO14498 428 aa8.81□□□□□ -1
HLA-DOA-204ENST00000485901 COX7A2P2O60397 106 aa8.81□□□□□ -1
HLA-DOA-204ENST00000485901 FGF7P21781 194 aa8.81□□□□□ -1
HLA-DOA-204ENST00000485901 RPL12P30050 165 aaKnown RBP8.81□□□□□ -1
HLA-DOA-204ENST00000485901 PSMB3P49720 205 aa8.81□□□□□ -1
HLA-DOA-204ENST00000485901 MIC13Q5XKP0 118 aa8.81□□□□□ -1
HLA-DOA-204ENST00000485901 OR11H7Q8NGC8 314 aa8.81□□□□□ -1
HLA-DOA-204ENST00000485901 OR1L4Q8NGR5 311 aa8.81□□□□□ -1
HLA-DOA-204ENST00000485901 THAP6Q8TBB0 222 aa8.81□□□□□ -1
HLA-DOA-204ENST00000485901 C16orf92Q96LL3 132 aa8.81□□□□□ -1
HLA-DOA-204ENST00000485901 LINC00052Q96N35 136 aa8.81□□□□□ -1
HLA-DOA-204ENST00000485901 UHRF2Q96PU4 802 aa8.81□□□□□ -1
HLA-DOA-204ENST00000485901 OVOL2Q9BRP0 275 aa8.81□□□□□ -1
HLA-DOA-204ENST00000485901 SCRT1Q9BWW7 348 aa8.81□□□□□ -1
HLA-DOA-204ENST00000485901 RETNQ9HD89 108 aa8.81□□□□□ -1
HLA-DOA-204ENST00000485901 TP53TG1Q9Y2A0 90 aa8.81□□□□□ -1
HLA-DOA-204ENST00000485901 KMT2AQ03164 3969 aa8.81□□□□□ -1
HLA-DOA-204ENST00000485901 KNCNA6PVL3 124 aa8.8□□□□□ -1
HLA-DOA-204ENST00000485901 SPRY2O43597 315 aa8.8□□□□□ -1
HLA-DOA-204ENST00000485901 B2MP61769 119 aa8.8□□□□□ -1
HLA-DOA-204ENST00000485901 PRR20EP86478 221 aa8.8□□□□□ -1
HLA-DOA-204ENST00000485901 PRR20CP86479 221 aa8.8□□□□□ -1
HLA-DOA-204ENST00000485901 PRR20DP86480 221 aa8.8□□□□□ -1
HLA-DOA-204ENST00000485901 PRR20BP86481 221 aa8.8□□□□□ -1
HLA-DOA-204ENST00000485901 PRR20AP86496 221 aa8.8□□□□□ -1
HLA-DOA-204ENST00000485901 FGL1Q08830 312 aa8.8□□□□□ -1
HLA-DOA-204ENST00000485901 CLINT1Q14677 625 aa8.8□□□□□ -1
HLA-DOA-204ENST00000485901 ACTL10Q5JWF8 245 aa8.8□□□□□ -1
HLA-DOA-204ENST00000485901 C10orf113Q5VZT2 155 aa8.8□□□□□ -1
HLA-DOA-204ENST00000485901 LINC00305Q7Z4B0 112 aa8.8□□□□□ -1
HLA-DOA-204ENST00000485901 ASB13Q8WXK3 278 aa8.8□□□□□ -1
HLA-DOA-204ENST00000485901 TMEM37Q8WXS4 190 aa8.8□□□□□ -1
HLA-DOA-204ENST00000485901 SLC39A9Q9NUM3 307 aa8.8□□□□□ -1
HLA-DOA-204ENST00000485901 MBD2Q9UBB5 411 aa8.8□□□□□ -1
HLA-DOA-204ENST00000485901 SOCS3O14543 225 aa8.79□□□□□ -1
HLA-DOA-204ENST00000485901 SPP1P10451 314 aa8.79□□□□□ -1
HLA-DOA-204ENST00000485901 OPCMLQ14982 345 aa8.79□□□□□ -1
HLA-DOA-204ENST00000485901 DEFB135Q30KP9 77 aa8.79□□□□□ -1
HLA-DOA-204ENST00000485901 TMEM41BQ5BJD5 291 aa8.79□□□□□ -1
HLA-DOA-204ENST00000485901 MORN3Q6PF18 240 aaPredicted RBP8.79□□□□□ -1
HLA-DOA-204ENST00000485901 TRPT1Q86TN4 253 aaKnown RBP8.79□□□□□ -1
HLA-DOA-204ENST00000485901 ZNF709Q8N972 641 aa8.79□□□□□ -1
HLA-DOA-204ENST00000485901 RNF183Q96D59 192 aa8.79□□□□□ -1
HLA-DOA-204ENST00000485901 PFDN5Q99471 154 aa8.79□□□□□ -1
HLA-DOA-204ENST00000485901 NPCDR1Q9BY65 106 aa8.79□□□□□ -1
HLA-DOA-204ENST00000485901 HSPB11Q9Y547 144 aa8.79□□□□□ -1
HLA-DOA-204ENST00000485901 PXMP4Q9Y6I8 212 aa8.79□□□□□ -1
HLA-DOA-204ENST00000485901 H3BMM0 161 aa8.78□□□□□ -1
HLA-DOA-204ENST00000485901 GIPP09681 153 aaPredicted RBP8.78□□□□□ -1
HLA-DOA-204ENST00000485901 NUTF2P61970 127 aaKnown RBP8.78□□□□□ -1
HLA-DOA-204ENST00000485901 SPATA31B1PQ5VZV4 182 aa8.78□□□□□ -1
HLA-DOA-204ENST00000485901 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.78□□□□□ -1
HLA-DOA-204ENST00000485901 BPIFA4PQ86YQ2 179 aa8.78□□□□□ -1
HLA-DOA-204ENST00000485901 SCGB1C1Q8TD33 95 aa8.78□□□□□ -1
HLA-DOA-204ENST00000485901 GATAD1Q8WUU5 269 aa8.78□□□□□ -1
HLA-DOA-204ENST00000485901 ATP5SQ99766 215 aa8.78□□□□□ -1
HLA-DOA-204ENST00000485901 WDR61Q9GZS3 305 aaKnown RBP8.78□□□□□ -1
HLA-DOA-204ENST00000485901 KCNIP2Q9NS61 270 aa8.78□□□□□ -1
HLA-DOA-204ENST00000485901 A0A087X0K7 114 aa8.77□□□□□ -1.01
HLA-DOA-204ENST00000485901 C17orf112F2Z3M2 114 aa8.77□□□□□ -1.01
HLA-DOA-204ENST00000485901 CA1P00915 261 aaPredicted RBP8.77□□□□□ -1.01
HLA-DOA-204ENST00000485901 IFNA5P01569 189 aa8.77□□□□□ -1.01
HLA-DOA-204ENST00000485901 EBLN2Q6P2I7 272 aa8.77□□□□□ -1.01
HLA-DOA-204ENST00000485901 FOXI2Q6ZQN5 318 aa8.77□□□□□ -1.01
HLA-DOA-204ENST00000485901 LRRC20Q8TCA0 184 aa8.77□□□□□ -1.01
HLA-DOA-204ENST00000485901 C17orf77Q96MU5 243 aa8.77□□□□□ -1.01
HLA-DOA-204ENST00000485901 SAV1Q9H4B6 383 aaPredicted RBP8.77□□□□□ -1.01
HLA-DOA-204ENST00000485901 RPRMQ9NS64 109 aa8.77□□□□□ -1.01
HLA-DOA-204ENST00000485901 KLK5Q9Y337 293 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms