RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 ZNF688P0C7X2 276 aa13.11□□□□□ -0.31
SREBF1-213ENST00000485080 RPL7P18124 248 aaKnown RBP13.11□□□□□ -0.31
SREBF1-213ENST00000485080 ZNF124Q15973 351 aa13.11□□□□□ -0.31
SREBF1-213ENST00000485080 C17orf77Q96MU5 243 aa13.11□□□□□ -0.31
SREBF1-213ENST00000485080 WWC2-AS2Q96NR7 200 aa13.11□□□□□ -0.31
SREBF1-213ENST00000485080 SCRT1Q9BWW7 348 aa13.11□□□□□ -0.31
SREBF1-213ENST00000485080 DOK5Q9P104 306 aa13.11□□□□□ -0.31
SREBF1-213ENST00000485080 TP53TG1Q9Y2A0 90 aa13.11□□□□□ -0.31
SREBF1-213ENST00000485080 HSPB11Q9Y547 144 aa13.11□□□□□ -0.31
SREBF1-213ENST00000485080 AGRNO00468 2067 aa13.11□□□□□ -0.31
SREBF1-213ENST00000485080 ISLRO14498 428 aa13.1□□□□□ -0.31
SREBF1-213ENST00000485080 OR5G3P0C626 314 aa13.1□□□□□ -0.31
SREBF1-213ENST00000485080 RPL12P30050 165 aaKnown RBP13.1□□□□□ -0.31
SREBF1-213ENST00000485080 ID1P41134 155 aa13.1□□□□□ -0.31
SREBF1-213ENST00000485080 PSMB3P49720 205 aa13.1□□□□□ -0.31
SREBF1-213ENST00000485080 FGL1Q08830 312 aa13.1□□□□□ -0.31
SREBF1-213ENST00000485080 Q6ZRG5 221 aa13.1□□□□□ -0.31
SREBF1-213ENST00000485080 TMEM37Q8WXS4 190 aa13.1□□□□□ -0.31
SREBF1-213ENST00000485080 SLC25A22Q9H936 323 aa13.1□□□□□ -0.31
SREBF1-213ENST00000485080 DNAJC4Q9NNZ3 241 aa13.1□□□□□ -0.31
SREBF1-213ENST00000485080 FGF7P21781 194 aa13.09□□□□□ -0.31
SREBF1-213ENST00000485080 MIC13Q5XKP0 118 aa13.09□□□□□ -0.31
SREBF1-213ENST00000485080 LEMD1Q68G75 181 aa13.09□□□□□ -0.31
SREBF1-213ENST00000485080 OR1L4Q8NGR5 311 aa13.09□□□□□ -0.31
SREBF1-213ENST00000485080 THAP6Q8TBB0 222 aa13.09□□□□□ -0.31
SREBF1-213ENST00000485080 UHRF2Q96PU4 802 aa13.09□□□□□ -0.31
SREBF1-213ENST00000485080 PFDN5Q99471 154 aa13.09□□□□□ -0.31
SREBF1-213ENST00000485080 RSG1Q9BU20 258 aa13.09□□□□□ -0.31
SREBF1-213ENST00000485080 NPCDR1Q9BY65 106 aa13.09□□□□□ -0.31
SREBF1-213ENST00000485080 CSTL1Q9H114 145 aa13.09□□□□□ -0.31
SREBF1-213ENST00000485080 SLC39A9Q9NUM3 307 aa13.09□□□□□ -0.31
SREBF1-213ENST00000485080 MRPS12O15235 138 aaKnown RBP13.08□□□□□ -0.32
SREBF1-213ENST00000485080 COX7A2P2O60397 106 aa13.08□□□□□ -0.32
SREBF1-213ENST00000485080 RPL35AP18077 110 aaKnown RBP13.08□□□□□ -0.32
SREBF1-213ENST00000485080 B2MP61769 119 aa13.08□□□□□ -0.32
SREBF1-213ENST00000485080 CLINT1Q14677 625 aa13.08□□□□□ -0.32
SREBF1-213ENST00000485080 PSMG4Q5JS54 123 aa13.08□□□□□ -0.32
SREBF1-213ENST00000485080 LINC00305Q7Z4B0 112 aa13.08□□□□□ -0.32
SREBF1-213ENST00000485080 TRPT1Q86TN4 253 aaKnown RBP13.08□□□□□ -0.32
SREBF1-213ENST00000485080 ATP5SQ99766 215 aa13.08□□□□□ -0.32
SREBF1-213ENST00000485080 WDR61Q9GZS3 305 aaKnown RBP13.08□□□□□ -0.32
SREBF1-213ENST00000485080 PXMP4Q9Y6I8 212 aa13.08□□□□□ -0.32
SREBF1-213ENST00000485080 A0A087X0K7 114 aa13.07□□□□□ -0.32
SREBF1-213ENST00000485080 C10orf113Q5VZT2 155 aa13.07□□□□□ -0.32
SREBF1-213ENST00000485080 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.07□□□□□ -0.32
SREBF1-213ENST00000485080 STHQ8IWL8 128 aa13.07□□□□□ -0.32
SREBF1-213ENST00000485080 GATAD1Q8WUU5 269 aa13.07□□□□□ -0.32
SREBF1-213ENST00000485080 OVOL2Q9BRP0 275 aa13.07□□□□□ -0.32
SREBF1-213ENST00000485080 PARD6GQ9BYG4 376 aaPredicted RBP13.07□□□□□ -0.32
SREBF1-213ENST00000485080 KCNIP2Q9NS61 270 aa13.07□□□□□ -0.32
SREBF1-213ENST00000485080 SPATA31B1PQ5VZV4 182 aa13.06□□□□□ -0.32
SREBF1-213ENST00000485080 RNF183Q96D59 192 aa13.06□□□□□ -0.32
SREBF1-213ENST00000485080 CLUHP3Q96NS8 147 aa13.06□□□□□ -0.32
SREBF1-213ENST00000485080 EDA2RQ9HAV5 297 aa13.06□□□□□ -0.32
SREBF1-213ENST00000485080 SPP1P10451 314 aa13.05□□□□□ -0.32
SREBF1-213ENST00000485080 TMEM41BQ5BJD5 291 aa13.05□□□□□ -0.32
SREBF1-213ENST00000485080 ACTL10Q5JWF8 245 aa13.05□□□□□ -0.32
SREBF1-213ENST00000485080 MORN3Q6PF18 240 aaPredicted RBP13.05□□□□□ -0.32
SREBF1-213ENST00000485080 AQP10Q96PS8 301 aa13.05□□□□□ -0.32
SREBF1-213ENST00000485080 RETNQ9HD89 108 aa13.05□□□□□ -0.32
SREBF1-213ENST00000485080 KNCNA6PVL3 124 aa13.04□□□□□ -0.32
SREBF1-213ENST00000485080 H3BMM0 161 aa13.04□□□□□ -0.32
SREBF1-213ENST00000485080 SPRY2O43597 315 aa13.04□□□□□ -0.32
SREBF1-213ENST00000485080 HLA-DRB4P13762 266 aa13.04□□□□□ -0.32
SREBF1-213ENST00000485080 ATF4P18848 351 aaPredicted RBP13.04□□□□□ -0.32
SREBF1-213ENST00000485080 CXCL2P19875 107 aa13.04□□□□□ -0.32
SREBF1-213ENST00000485080 FOXI2Q6ZQN5 318 aa13.04□□□□□ -0.32
SREBF1-213ENST00000485080 BPIFA4PQ86YQ2 179 aa13.04□□□□□ -0.32
SREBF1-213ENST00000485080 ZNF709Q8N972 641 aa13.04□□□□□ -0.32
SREBF1-213ENST00000485080 C16orf92Q96LL3 132 aa13.04□□□□□ -0.32
SREBF1-213ENST00000485080 HLA-DRB4X5D2U9 266 aa13.04□□□□□ -0.32
SREBF1-213ENST00000485080 IFNA5P01569 189 aa13.03□□□□□ -0.32
SREBF1-213ENST00000485080 GIG44P09565 113 aaPredicted RBP13.03□□□□□ -0.32
SREBF1-213ENST00000485080 Q5BKY6 102 aa13.03□□□□□ -0.32
SREBF1-213ENST00000485080 LINC00052Q96N35 136 aa13.03□□□□□ -0.32
SREBF1-213ENST00000485080 SAV1Q9H4B6 383 aaPredicted RBP13.03□□□□□ -0.32
SREBF1-213ENST00000485080 CSMD3Q7Z407 3707 aa13.02□□□□□ -0.33
SREBF1-213ENST00000485080 TRAV8-2A0A0B4J237 113 aa13.02□□□□□ -0.33
SREBF1-213ENST00000485080 C17orf112F2Z3M2 114 aa13.02□□□□□ -0.33
SREBF1-213ENST00000485080 IGLC2P0DOY2 106 aa13.02□□□□□ -0.33
SREBF1-213ENST00000485080 DEFB135Q30KP9 77 aa13.02□□□□□ -0.33
SREBF1-213ENST00000485080 MORN5Q5VZ52 161 aa13.02□□□□□ -0.33
SREBF1-213ENST00000485080 HRH4Q9H3N8 390 aa13.02□□□□□ -0.33
SREBF1-213ENST00000485080 WFDC1Q9HC57 220 aa13.02□□□□□ -0.33
SREBF1-213ENST00000485080 RPRMQ9NS64 109 aa13.02□□□□□ -0.33
SREBF1-213ENST00000485080 A8MTW9 85 aa13.01□□□□□ -0.33
SREBF1-213ENST00000485080 LCN15Q6UWW0 184 aa13.01□□□□□ -0.33
SREBF1-213ENST00000485080 OR2T35Q8NGX2 323 aa13.01□□□□□ -0.33
SREBF1-213ENST00000485080 SCGB1C1Q8TD33 95 aa13.01□□□□□ -0.33
SREBF1-213ENST00000485080 C20orf173Q96LM9 149 aa13.01□□□□□ -0.33
SREBF1-213ENST00000485080 TMEM14CQ9P0S9 112 aa13.01□□□□□ -0.33
SREBF1-213ENST00000485080 G3V3Q6 166 aa13□□□□□ -0.33
SREBF1-213ENST00000485080 CA1P00915 261 aaPredicted RBP13□□□□□ -0.33
SREBF1-213ENST00000485080 GUK1Q16774 197 aa13□□□□□ -0.33
SREBF1-213ENST00000485080 SMIM3Q9BZL3 60 aa13□□□□□ -0.33
SREBF1-213ENST00000485080 CLEC5AQ9NY25 188 aa13□□□□□ -0.33
SREBF1-213ENST00000485080 A0A0J9YX75 114 aa12.99□□□□□ -0.33
SREBF1-213ENST00000485080 NUTF2P61970 127 aaKnown RBP12.99□□□□□ -0.33
SREBF1-213ENST00000485080 ZNF266Q14584 549 aa12.99□□□□□ -0.33
SREBF1-213ENST00000485080 GCSAMLQ5JQS6 135 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms