RNA–Protein interactions for RNA: ENST00000482152.1

CCDC78-212, Transcript of coiled-coil domain containing 78, humanhuman

TSL 5

Gene CCDC78, Length 899 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-212ENST00000482152 CXCL3P19876 107 aa12.06□□□□□ -0.48
CCDC78-212ENST00000482152 TMEM41BQ5BJD5 291 aa12.06□□□□□ -0.48
CCDC78-212ENST00000482152 PATE2Q6UY27 113 aa12.06□□□□□ -0.48
CCDC78-212ENST00000482152 PFDN5Q99471 154 aa12.06□□□□□ -0.48
CCDC78-212ENST00000482152 SLC25A32Q9H2D1 315 aa12.06□□□□□ -0.48
CCDC78-212ENST00000482152 DOK5Q9P104 306 aa12.06□□□□□ -0.48
CCDC78-212ENST00000482152 COX7A2P2O60397 106 aa12.05□□□□□ -0.48
CCDC78-212ENST00000482152 FGF7P21781 194 aa12.05□□□□□ -0.48
CCDC78-212ENST00000482152 RPL12P30050 165 aaKnown RBP12.05□□□□□ -0.48
CCDC78-212ENST00000482152 FCN2Q15485 313 aa12.05□□□□□ -0.48
CCDC78-212ENST00000482152 PSMG4Q5JS54 123 aa12.05□□□□□ -0.48
CCDC78-212ENST00000482152 C10orf113Q5VZT2 155 aa12.05□□□□□ -0.48
CCDC78-212ENST00000482152 SPATA31B1PQ5VZV4 182 aa12.05□□□□□ -0.48
CCDC78-212ENST00000482152 LEMD1Q68G75 181 aa12.05□□□□□ -0.48
CCDC78-212ENST00000482152 OR11H7Q8NGC8 314 aa12.05□□□□□ -0.48
CCDC78-212ENST00000482152 RSG1Q9BU20 258 aa12.05□□□□□ -0.48
CCDC78-212ENST00000482152 KCNIP2Q9NS61 270 aa12.05□□□□□ -0.48
CCDC78-212ENST00000482152 GIPP09681 153 aaPredicted RBP12.04□□□□□ -0.48
CCDC78-212ENST00000482152 SPP1P10451 314 aa12.04□□□□□ -0.48
CCDC78-212ENST00000482152 RPL35AP18077 110 aaKnown RBP12.04□□□□□ -0.48
CCDC78-212ENST00000482152 B2MP61769 119 aa12.04□□□□□ -0.48
CCDC78-212ENST00000482152 OPCMLQ14982 345 aa12.04□□□□□ -0.48
CCDC78-212ENST00000482152 MORN3Q6PF18 240 aaPredicted RBP12.04□□□□□ -0.48
CCDC78-212ENST00000482152 LINC00305Q7Z4B0 112 aa12.04□□□□□ -0.48
CCDC78-212ENST00000482152 ZNF709Q8N972 641 aa12.04□□□□□ -0.48
CCDC78-212ENST00000482152 SCRT1Q9BWW7 348 aa12.04□□□□□ -0.48
CCDC78-212ENST00000482152 SLC39A9Q9NUM3 307 aa12.04□□□□□ -0.48
CCDC78-212ENST00000482152 MBD2Q9UBB5 411 aa12.04□□□□□ -0.48
CCDC78-212ENST00000482152 HSPB11Q9Y547 144 aa12.04□□□□□ -0.48
CCDC78-212ENST00000482152 SOCS3O14543 225 aa12.03□□□□□ -0.48
CCDC78-212ENST00000482152 SPRY2O43597 315 aa12.03□□□□□ -0.48
CCDC78-212ENST00000482152 ATF4P18848 351 aaPredicted RBP12.03□□□□□ -0.48
CCDC78-212ENST00000482152 ZNF124Q15973 351 aa12.03□□□□□ -0.48
CCDC78-212ENST00000482152 MIC13Q5XKP0 118 aa12.03□□□□□ -0.48
CCDC78-212ENST00000482152 TRPT1Q86TN4 253 aaKnown RBP12.03□□□□□ -0.48
CCDC78-212ENST00000482152 BPIFA4PQ86YQ2 179 aa12.03□□□□□ -0.48
CCDC78-212ENST00000482152 GATAD1Q8WUU5 269 aa12.03□□□□□ -0.48
CCDC78-212ENST00000482152 TMEM37Q8WXS4 190 aa12.03□□□□□ -0.48
CCDC78-212ENST00000482152 C16orf92Q96LL3 132 aa12.03□□□□□ -0.48
CCDC78-212ENST00000482152 UHRF2Q96PU4 802 aa12.03□□□□□ -0.48
CCDC78-212ENST00000482152 ATP5SQ99766 215 aa12.03□□□□□ -0.48
CCDC78-212ENST00000482152 NPCDR1Q9BY65 106 aa12.03□□□□□ -0.48
CCDC78-212ENST00000482152 A0A087X0K7 114 aa12.02□□□□□ -0.49
CCDC78-212ENST00000482152 C17orf112F2Z3M2 114 aa12.02□□□□□ -0.49
CCDC78-212ENST00000482152 IFNA5P01569 189 aa12.02□□□□□ -0.49
CCDC78-212ENST00000482152 NUTF2P61970 127 aaKnown RBP12.02□□□□□ -0.49
CCDC78-212ENST00000482152 CLINT1Q14677 625 aa12.02□□□□□ -0.49
CCDC78-212ENST00000482152 ACTL10Q5JWF8 245 aa12.02□□□□□ -0.49
CCDC78-212ENST00000482152 RNF183Q96D59 192 aa12.02□□□□□ -0.49
CCDC78-212ENST00000482152 LINC00052Q96N35 136 aa12.02□□□□□ -0.49
CCDC78-212ENST00000482152 CLUHP3Q96NS8 147 aa12.02□□□□□ -0.49
CCDC78-212ENST00000482152 OVOL2Q9BRP0 275 aa12.02□□□□□ -0.49
CCDC78-212ENST00000482152 PARD6GQ9BYG4 376 aaPredicted RBP12.02□□□□□ -0.49
CCDC78-212ENST00000482152 WDR61Q9GZS3 305 aaKnown RBP12.02□□□□□ -0.49
CCDC78-212ENST00000482152 RPRMQ9NS64 109 aa12.02□□□□□ -0.49
CCDC78-212ENST00000482152 PXMP4Q9Y6I8 212 aa12.02□□□□□ -0.49
CCDC78-212ENST00000482152 CXCL2P19875 107 aa12.01□□□□□ -0.49
CCDC78-212ENST00000482152 SCGB1C1Q8TD33 95 aa12.01□□□□□ -0.49
CCDC78-212ENST00000482152 KNCNA6PVL3 124 aa12□□□□□ -0.49
CCDC78-212ENST00000482152 H3BMM0 161 aa12□□□□□ -0.49
CCDC78-212ENST00000482152 HLA-DRB4P13762 266 aa12□□□□□ -0.49
CCDC78-212ENST00000482152 EBLN2Q6P2I7 272 aa12□□□□□ -0.49
CCDC78-212ENST00000482152 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12□□□□□ -0.49
CCDC78-212ENST00000482152 FOXI2Q6ZQN5 318 aa12□□□□□ -0.49
CCDC78-212ENST00000482152 SAV1Q9H4B6 383 aaPredicted RBP12□□□□□ -0.49
CCDC78-212ENST00000482152 EDA2RQ9HAV5 297 aa12□□□□□ -0.49
CCDC78-212ENST00000482152 CLEC5AQ9NY25 188 aa12□□□□□ -0.49
CCDC78-212ENST00000482152 HLA-DRB4X5D2U9 266 aa12□□□□□ -0.49
CCDC78-212ENST00000482152 GUK1Q16774 197 aa11.99□□□□□ -0.49
CCDC78-212ENST00000482152 DEFB135Q30KP9 77 aa11.99□□□□□ -0.49
CCDC78-212ENST00000482152 IL17DQ8TAD2 202 aa11.99□□□□□ -0.49
CCDC78-212ENST00000482152 LRRC20Q8TCA0 184 aa11.99□□□□□ -0.49
CCDC78-212ENST00000482152 C17orf77Q96MU5 243 aa11.99□□□□□ -0.49
CCDC78-212ENST00000482152 AQP10Q96PS8 301 aa11.99□□□□□ -0.49
CCDC78-212ENST00000482152 C1QTNF4Q9BXJ3 329 aa11.99□□□□□ -0.49
CCDC78-212ENST00000482152 RETNQ9HD89 108 aa11.99□□□□□ -0.49
CCDC78-212ENST00000482152 C3orf84H3BNL1 204 aa11.98□□□□□ -0.49
CCDC78-212ENST00000482152 MRPS12O15235 138 aaKnown RBP11.98□□□□□ -0.49
CCDC78-212ENST00000482152 CA1P00915 261 aaPredicted RBP11.98□□□□□ -0.49
CCDC78-212ENST00000482152 SLC50A1Q9BRV3 221 aa11.98□□□□□ -0.49
CCDC78-212ENST00000482152 HRH4Q9H3N8 390 aa11.98□□□□□ -0.49
CCDC78-212ENST00000482152 ZNF266Q14584 549 aa11.97□□□□□ -0.49
CCDC78-212ENST00000482152 LCN15Q6UWW0 184 aa11.97□□□□□ -0.49
CCDC78-212ENST00000482152 INO80EQ8NBZ0 244 aaPredicted RBP11.97□□□□□ -0.49
CCDC78-212ENST00000482152 MUC7Q8TAX7 377 aa11.97□□□□□ -0.49
CCDC78-212ENST00000482152 TMEM14CQ9P0S9 112 aa11.97□□□□□ -0.49
CCDC78-212ENST00000482152 NBEAL2Q6ZNJ1 2754 aa11.96□□□□□ -0.49
CCDC78-212ENST00000482152 DUSP14O95147 198 aaKnown RBP11.96□□□□□ -0.49
CCDC78-212ENST00000482152 OR2T35Q8NGX2 323 aa11.96□□□□□ -0.49
CCDC78-212ENST00000482152 MRPL32Q9BYC8 188 aaKnown RBP11.96□□□□□ -0.49
CCDC78-212ENST00000482152 TRAV8-2A0A0B4J237 113 aa11.95□□□□□ -0.5
CCDC78-212ENST00000482152 A0A0J9YX75 114 aa11.95□□□□□ -0.5
CCDC78-212ENST00000482152 ZNF253O75346 499 aa11.95□□□□□ -0.5
CCDC78-212ENST00000482152 IGLC2P0DOY2 106 aa11.95□□□□□ -0.5
CCDC78-212ENST00000482152 FAM78BQ5VT40 261 aa11.95□□□□□ -0.5
CCDC78-212ENST00000482152 MORN5Q5VZ52 161 aa11.95□□□□□ -0.5
CCDC78-212ENST00000482152 RARRES2Q99969 163 aa11.95□□□□□ -0.5
CCDC78-212ENST00000482152 SMIM3Q9BZL3 60 aa11.95□□□□□ -0.5
CCDC78-212ENST00000482152 ZNF331Q9NQX6 463 aaPredicted RBP11.95□□□□□ -0.5
CCDC78-212ENST00000482152 HUWE1Q7Z6Z7 4374 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms