RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 ZNF546Q86UE3 836 aa7.81□□□□□ -1.16
SSBP1-210ENST00000481508 PPP1R14BQ96C90 147 aa7.81□□□□□ -1.16
SSBP1-210ENST00000481508 SHANK2-AS3Q9BTD1 123 aa7.81□□□□□ -1.16
SSBP1-210ENST00000481508 SLC25A39Q9BZJ4 359 aaPredicted RBP7.81□□□□□ -1.16
SSBP1-210ENST00000481508 SMIM3Q9BZL3 60 aa7.81□□□□□ -1.16
SSBP1-210ENST00000481508 SLC25A31Q9H0C2 315 aa7.81□□□□□ -1.16
SSBP1-210ENST00000481508 ARL6Q9H0F7 186 aa7.81□□□□□ -1.16
SSBP1-210ENST00000481508 SLC25A22Q9H936 323 aa7.81□□□□□ -1.16
SSBP1-210ENST00000481508 WFDC1Q9HC57 220 aa7.81□□□□□ -1.16
SSBP1-210ENST00000481508 HSPB11Q9Y547 144 aa7.81□□□□□ -1.16
SSBP1-210ENST00000481508 RFNGQ9Y644 331 aa7.81□□□□□ -1.16
SSBP1-210ENST00000481508 HELTA6NFD8 242 aa7.8□□□□□ -1.16
SSBP1-210ENST00000481508 KNCNA6PVL3 124 aa7.8□□□□□ -1.16
SSBP1-210ENST00000481508 HYPMO75409 117 aa7.8□□□□□ -1.16
SSBP1-210ENST00000481508 CFDP00746 253 aaPredicted RBP7.8□□□□□ -1.16
SSBP1-210ENST00000481508 CD5P06127 495 aa7.8□□□□□ -1.16
SSBP1-210ENST00000481508 GIPP09681 153 aaPredicted RBP7.8□□□□□ -1.16
SSBP1-210ENST00000481508 OR5G3P0C626 314 aa7.8□□□□□ -1.16
SSBP1-210ENST00000481508 RPL35AP18077 110 aaKnown RBP7.8□□□□□ -1.16
SSBP1-210ENST00000481508 RPL12P30050 165 aaKnown RBP7.8□□□□□ -1.16
SSBP1-210ENST00000481508 CAMLGP49069 296 aa7.8□□□□□ -1.16
SSBP1-210ENST00000481508 SELENOTP62341 195 aa7.8□□□□□ -1.16
SSBP1-210ENST00000481508 PAFAH1B2P68402 229 aa7.8□□□□□ -1.16
SSBP1-210ENST00000481508 OPCMLQ14982 345 aa7.8□□□□□ -1.16
SSBP1-210ENST00000481508 C1orf194Q5T5A4 169 aa7.8□□□□□ -1.16
SSBP1-210ENST00000481508 TMEM37Q8WXS4 190 aa7.8□□□□□ -1.16
SSBP1-210ENST00000481508 FAM110AQ9BQ89 295 aa7.8□□□□□ -1.16
SSBP1-210ENST00000481508 ARV1Q9H2C2 271 aa7.8□□□□□ -1.16
SSBP1-210ENST00000481508 NRN1Q9NPD7 142 aa7.8□□□□□ -1.16
SSBP1-210ENST00000481508 HIGD1AQ9Y241 93 aa7.8□□□□□ -1.16
SSBP1-210ENST00000481508 LOC102724200A0A096LPH7 203 aaPredicted RBP7.79□□□□□ -1.16
SSBP1-210ENST00000481508 FAM229AH3BQW9 127 aa7.79□□□□□ -1.16
SSBP1-210ENST00000481508 SMLR1H3BR10 107 aa7.79□□□□□ -1.16
SSBP1-210ENST00000481508 MRPS12O15235 138 aaKnown RBP7.79□□□□□ -1.16
SSBP1-210ENST00000481508 H2AFB1P0C5Y9 115 aa7.79□□□□□ -1.16
SSBP1-210ENST00000481508 NHLRC4P0CG21 123 aaPredicted RBP7.79□□□□□ -1.16
SSBP1-210ENST00000481508 PET100P0DJ07 73 aa7.79□□□□□ -1.16
SSBP1-210ENST00000481508 ATP6V1FQ16864 119 aa7.79□□□□□ -1.16
SSBP1-210ENST00000481508 GCSAMLQ5JQS6 135 aa7.79□□□□□ -1.16
SSBP1-210ENST00000481508 PSMG4Q5JS54 123 aa7.79□□□□□ -1.16
SSBP1-210ENST00000481508 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.79□□□□□ -1.16
SSBP1-210ENST00000481508 OR8I2Q8N0Y5 310 aa7.79□□□□□ -1.16
SSBP1-210ENST00000481508 C20orf173Q96LM9 149 aa7.79□□□□□ -1.16
SSBP1-210ENST00000481508 RCHY1Q96PM5 261 aa7.79□□□□□ -1.16
SSBP1-210ENST00000481508 NPCDR1Q9BY65 106 aa7.79□□□□□ -1.16
SSBP1-210ENST00000481508 U3KQK5 164 aa7.79□□□□□ -1.16
SSBP1-210ENST00000481508 TRAV5A0A0B4J249 113 aa7.78□□□□□ -1.16
SSBP1-210ENST00000481508 SNRPCP09234 159 aaKnown RBP7.78□□□□□ -1.16
SSBP1-210ENST00000481508 PRB4P10163 310 aaPredicted RBP7.78□□□□□ -1.16
SSBP1-210ENST00000481508 NUP62P37198 522 aaPredicted RBP7.78□□□□□ -1.16
SSBP1-210ENST00000481508 RPL29P47914 159 aaKnown RBP7.78□□□□□ -1.16
SSBP1-210ENST00000481508 RAP2BP61225 183 aa7.78□□□□□ -1.16
SSBP1-210ENST00000481508 B2MP61769 119 aa7.78□□□□□ -1.16
SSBP1-210ENST00000481508 IGFL4Q6B9Z1 124 aa7.78□□□□□ -1.16
SSBP1-210ENST00000481508 ATP5SQ99766 215 aa7.78□□□□□ -1.16
SSBP1-210ENST00000481508 RSG1Q9BU20 258 aa7.78□□□□□ -1.16
SSBP1-210ENST00000481508 WDR61Q9GZS3 305 aaKnown RBP7.78□□□□□ -1.16
SSBP1-210ENST00000481508 SLC39A9Q9NUM3 307 aa7.78□□□□□ -1.16
SSBP1-210ENST00000481508 PXMP4Q9Y6I8 212 aa7.78□□□□□ -1.16
SSBP1-210ENST00000481508 TRAV8-2A0A0B4J237 113 aa7.77□□□□□ -1.17
SSBP1-210ENST00000481508 LCE6AA0A183 80 aa7.77□□□□□ -1.17
SSBP1-210ENST00000481508 COX7A2P2O60397 106 aa7.77□□□□□ -1.17
SSBP1-210ENST00000481508 HLA-DMBP28068 263 aa7.77□□□□□ -1.17
SSBP1-210ENST00000481508 AP2S1P53680 142 aaPredicted RBP7.77□□□□□ -1.17
SSBP1-210ENST00000481508 CASC10Q5T4H9 136 aa7.77□□□□□ -1.17
SSBP1-210ENST00000481508 GDF5OSQ5U4N7 250 aa7.77□□□□□ -1.17
SSBP1-210ENST00000481508 SPATA31B1PQ5VZV4 182 aa7.77□□□□□ -1.17
SSBP1-210ENST00000481508 LINC00305Q7Z4B0 112 aa7.77□□□□□ -1.17
SSBP1-210ENST00000481508 FBXL17Q9UF56 701 aa7.77□□□□□ -1.17
SSBP1-210ENST00000481508 FXYD6-FXYD2A0A087WZ82 144 aa7.76□□□□□ -1.17
SSBP1-210ENST00000481508 RNF222A6NCQ9 220 aa7.76□□□□□ -1.17
SSBP1-210ENST00000481508 F6UB75 175 aa7.76□□□□□ -1.17
SSBP1-210ENST00000481508 H3BTX0 84 aa7.76□□□□□ -1.17
SSBP1-210ENST00000481508 GIG44P09565 113 aaPredicted RBP7.76□□□□□ -1.17
SSBP1-210ENST00000481508 C4BPBP20851 252 aa7.76□□□□□ -1.17
SSBP1-210ENST00000481508 RAB31Q13636 194 aa7.76□□□□□ -1.17
SSBP1-210ENST00000481508 ACTL10Q5JWF8 245 aa7.76□□□□□ -1.17
SSBP1-210ENST00000481508 PXDC1Q5TGL8 231 aa7.76□□□□□ -1.17
SSBP1-210ENST00000481508 C10orf113Q5VZT2 155 aa7.76□□□□□ -1.17
SSBP1-210ENST00000481508 TRPT1Q86TN4 253 aaKnown RBP7.76□□□□□ -1.17
SSBP1-210ENST00000481508 RNF182Q8N6D2 247 aa7.76□□□□□ -1.17
SSBP1-210ENST00000481508 OR2T35Q8NGX2 323 aa7.76□□□□□ -1.17
SSBP1-210ENST00000481508 LINC00052Q96N35 136 aa7.76□□□□□ -1.17
SSBP1-210ENST00000481508 AQP10Q96PS8 301 aa7.76□□□□□ -1.17
SSBP1-210ENST00000481508 SPATA25Q9BR10 227 aa7.76□□□□□ -1.17
SSBP1-210ENST00000481508 OVOL2Q9BRP0 275 aa7.76□□□□□ -1.17
SSBP1-210ENST00000481508 DNAJC4Q9NNZ3 241 aa7.76□□□□□ -1.17
SSBP1-210ENST00000481508 PFDN2Q9UHV9 154 aa7.76□□□□□ -1.17
SSBP1-210ENST00000481508 C3orf84H3BNL1 204 aa7.75□□□□□ -1.17
SSBP1-210ENST00000481508 SLC17A3O00476 420 aa7.75□□□□□ -1.17
SSBP1-210ENST00000481508 MPDU1O75352 247 aa7.75□□□□□ -1.17
SSBP1-210ENST00000481508 EIF3GO75821 320 aaKnown RBP eCLIP7.75□□□□□ -1.177e-6■□□□□ 9.1
SSBP1-210ENST00000481508 GALR1P47211 349 aa7.75□□□□□ -1.17
SSBP1-210ENST00000481508 CMC4P56277 68 aaPredicted RBP7.75□□□□□ -1.17
SSBP1-210ENST00000481508 DEFB135Q30KP9 77 aa7.75□□□□□ -1.17
SSBP1-210ENST00000481508 ZMAT4Q9H898 229 aa7.75□□□□□ -1.17
SSBP1-210ENST00000481508 TNFSF18Q9UNG2 199 aa7.75□□□□□ -1.17
SSBP1-210ENST00000481508 A0A087X0K7 114 aa7.74□□□□□ -1.17
SSBP1-210ENST00000481508 H3BQ15 152 aa7.74□□□□□ -1.17
SSBP1-210ENST00000481508 IGLC2P0DOY2 106 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms