RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 ID1P41134 155 aa11.41□□□□□ -0.58
C9orf3-217ENST00000479161 NHLH2Q02577 135 aa11.41□□□□□ -0.58
C9orf3-217ENST00000479161 CD300CQ08708 224 aa11.41□□□□□ -0.58
C9orf3-217ENST00000479161 LRRC37A5PQ49AS3 106 aa11.41□□□□□ -0.58
C9orf3-217ENST00000479161 Q6ZRG5 221 aa11.41□□□□□ -0.58
C9orf3-217ENST00000479161 OR5C1Q8NGR4 320 aa11.41□□□□□ -0.58
C9orf3-217ENST00000479161 CLUHP3Q96NS8 147 aa11.41□□□□□ -0.58
C9orf3-217ENST00000479161 ARL6Q9H0F7 186 aa11.41□□□□□ -0.58
C9orf3-217ENST00000479161 CSTL1Q9H114 145 aa11.41□□□□□ -0.58
C9orf3-217ENST00000479161 ARV1Q9H2C2 271 aa11.41□□□□□ -0.58
C9orf3-217ENST00000479161 ZNF688P0C7X2 276 aa11.4□□□□□ -0.58
C9orf3-217ENST00000479161 FGL1Q08830 312 aa11.4□□□□□ -0.58
C9orf3-217ENST00000479161 OPCMLQ14982 345 aa11.4□□□□□ -0.58
C9orf3-217ENST00000479161 SPATA31B1PQ5VZV4 182 aa11.4□□□□□ -0.58
C9orf3-217ENST00000479161 PATE2Q6UY27 113 aa11.4□□□□□ -0.58
C9orf3-217ENST00000479161 PFDN5Q99471 154 aa11.4□□□□□ -0.58
C9orf3-217ENST00000479161 SLC25A32Q9H2D1 315 aa11.4□□□□□ -0.58
C9orf3-217ENST00000479161 DNAJC4Q9NNZ3 241 aa11.4□□□□□ -0.58
C9orf3-217ENST00000479161 A0A087X0K7 114 aa11.39□□□□□ -0.59
C9orf3-217ENST00000479161 OR5G3P0C626 314 aa11.39□□□□□ -0.59
C9orf3-217ENST00000479161 NDUFA5Q16718 116 aa11.39□□□□□ -0.59
C9orf3-217ENST00000479161 MORN3Q6PF18 240 aaPredicted RBP11.39□□□□□ -0.59
C9orf3-217ENST00000479161 TRPT1Q86TN4 253 aaKnown RBP11.39□□□□□ -0.59
C9orf3-217ENST00000479161 STHQ8IWL8 128 aa11.39□□□□□ -0.59
C9orf3-217ENST00000479161 OR11H7Q8NGC8 314 aa11.39□□□□□ -0.59
C9orf3-217ENST00000479161 OR1L4Q8NGR5 311 aa11.39□□□□□ -0.59
C9orf3-217ENST00000479161 EDA2RQ9HAV5 297 aa11.39□□□□□ -0.59
C9orf3-217ENST00000479161 RGS13O14921 159 aa11.38□□□□□ -0.59
C9orf3-217ENST00000479161 GIPP09681 153 aaPredicted RBP11.38□□□□□ -0.59
C9orf3-217ENST00000479161 SPP1P10451 314 aa11.38□□□□□ -0.59
C9orf3-217ENST00000479161 RPL12P30050 165 aaKnown RBP11.38□□□□□ -0.59
C9orf3-217ENST00000479161 FCN2Q15485 313 aa11.38□□□□□ -0.59
C9orf3-217ENST00000479161 THAP6Q8TBB0 222 aa11.38□□□□□ -0.59
C9orf3-217ENST00000479161 GATAD1Q8WUU5 269 aa11.38□□□□□ -0.59
C9orf3-217ENST00000479161 TMEM37Q8WXS4 190 aa11.38□□□□□ -0.59
C9orf3-217ENST00000479161 RNF183Q96D59 192 aa11.38□□□□□ -0.59
C9orf3-217ENST00000479161 C17orf77Q96MU5 243 aa11.38□□□□□ -0.59
C9orf3-217ENST00000479161 OVOL2Q9BRP0 275 aa11.38□□□□□ -0.59
C9orf3-217ENST00000479161 SCRT1Q9BWW7 348 aa11.38□□□□□ -0.59
C9orf3-217ENST00000479161 NPCDR1Q9BY65 106 aa11.38□□□□□ -0.59
C9orf3-217ENST00000479161 PARD6GQ9BYG4 376 aaPredicted RBP11.38□□□□□ -0.59
C9orf3-217ENST00000479161 SLC25A22Q9H936 323 aa11.38□□□□□ -0.59
C9orf3-217ENST00000479161 KCNIP2Q9NS61 270 aa11.38□□□□□ -0.59
C9orf3-217ENST00000479161 SLC39A9Q9NUM3 307 aa11.38□□□□□ -0.59
C9orf3-217ENST00000479161 HSPB11Q9Y547 144 aa11.38□□□□□ -0.59
C9orf3-217ENST00000479161 DNAH7Q8WXX0 4024 aa11.38□□□□□ -0.59
C9orf3-217ENST00000479161 UBE2L5PA0A1B0GUS4 154 aa11.37□□□□□ -0.59
C9orf3-217ENST00000479161 COX7A2P2O60397 106 aa11.37□□□□□ -0.59
C9orf3-217ENST00000479161 CXCL2P19875 107 aa11.37□□□□□ -0.59
C9orf3-217ENST00000479161 B2MP61769 119 aa11.37□□□□□ -0.59
C9orf3-217ENST00000479161 ZNF124Q15973 351 aa11.37□□□□□ -0.59
C9orf3-217ENST00000479161 PSMG4Q5JS54 123 aa11.37□□□□□ -0.59
C9orf3-217ENST00000479161 C10orf113Q5VZT2 155 aa11.37□□□□□ -0.59
C9orf3-217ENST00000479161 LEMD1Q68G75 181 aa11.37□□□□□ -0.59
C9orf3-217ENST00000479161 LINC00305Q7Z4B0 112 aa11.37□□□□□ -0.59
C9orf3-217ENST00000479161 RSG1Q9BU20 258 aa11.37□□□□□ -0.59
C9orf3-217ENST00000479161 WDR61Q9GZS3 305 aaKnown RBP11.37□□□□□ -0.59
C9orf3-217ENST00000479161 DOK5Q9P104 306 aa11.37□□□□□ -0.59
C9orf3-217ENST00000479161 MBD2Q9UBB5 411 aa11.37□□□□□ -0.59
C9orf3-217ENST00000479161 MRPS12O15235 138 aaKnown RBP11.36□□□□□ -0.59
C9orf3-217ENST00000479161 SPRY2O43597 315 aa11.36□□□□□ -0.59
C9orf3-217ENST00000479161 HLA-DRB4P13762 266 aa11.36□□□□□ -0.59
C9orf3-217ENST00000479161 ATF4P18848 351 aaPredicted RBP11.36□□□□□ -0.59
C9orf3-217ENST00000479161 FGF7P21781 194 aa11.36□□□□□ -0.59
C9orf3-217ENST00000479161 MIC13Q5XKP0 118 aa11.36□□□□□ -0.59
C9orf3-217ENST00000479161 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.36□□□□□ -0.59
C9orf3-217ENST00000479161 FOXI2Q6ZQN5 318 aa11.36□□□□□ -0.59
C9orf3-217ENST00000479161 BPIFA4PQ86YQ2 179 aa11.36□□□□□ -0.59
C9orf3-217ENST00000479161 ST6GAL2Q96JF0 529 aa11.36□□□□□ -0.59
C9orf3-217ENST00000479161 UHRF2Q96PU4 802 aa11.36□□□□□ -0.59
C9orf3-217ENST00000479161 ATP5SQ99766 215 aa11.36□□□□□ -0.59
C9orf3-217ENST00000479161 CLEC5AQ9NY25 188 aa11.36□□□□□ -0.59
C9orf3-217ENST00000479161 PXMP4Q9Y6I8 212 aa11.36□□□□□ -0.59
C9orf3-217ENST00000479161 HLA-DRB4X5D2U9 266 aa11.36□□□□□ -0.59
C9orf3-217ENST00000479161 H3BMM0 161 aa11.35□□□□□ -0.59
C9orf3-217ENST00000479161 C3orf84H3BNL1 204 aa11.35□□□□□ -0.59
C9orf3-217ENST00000479161 RPL35AP18077 110 aaKnown RBP11.35□□□□□ -0.59
C9orf3-217ENST00000479161 NUTF2P61970 127 aaKnown RBP11.35□□□□□ -0.59
C9orf3-217ENST00000479161 ZFP69Q49AA0 526 aa11.35□□□□□ -0.59
C9orf3-217ENST00000479161 TCTE3Q8IZS6 198 aa11.35□□□□□ -0.59
C9orf3-217ENST00000479161 SAV1Q9H4B6 383 aaPredicted RBP11.35□□□□□ -0.59
C9orf3-217ENST00000479161 RPRMQ9NS64 109 aa11.35□□□□□ -0.59
C9orf3-217ENST00000479161 C17orf112F2Z3M2 114 aa11.34□□□□□ -0.59
C9orf3-217ENST00000479161 GUK1Q16774 197 aa11.34□□□□□ -0.59
C9orf3-217ENST00000479161 ACTL10Q5JWF8 245 aa11.34□□□□□ -0.59
C9orf3-217ENST00000479161 ZNF709Q8N972 641 aa11.34□□□□□ -0.59
C9orf3-217ENST00000479161 C16orf92Q96LL3 132 aa11.34□□□□□ -0.59
C9orf3-217ENST00000479161 AQP10Q96PS8 301 aa11.34□□□□□ -0.59
C9orf3-217ENST00000479161 A8MTW9 85 aa11.33□□□□□ -0.6
C9orf3-217ENST00000479161 CLINT1Q14677 625 aa11.33□□□□□ -0.6
C9orf3-217ENST00000479161 LCN15Q6UWW0 184 aa11.33□□□□□ -0.6
C9orf3-217ENST00000479161 IL17DQ8TAD2 202 aa11.33□□□□□ -0.6
C9orf3-217ENST00000479161 SLC50A1Q9BRV3 221 aa11.33□□□□□ -0.6
C9orf3-217ENST00000479161 C1QTNF4Q9BXJ3 329 aa11.33□□□□□ -0.6
C9orf3-217ENST00000479161 HRH4Q9H3N8 390 aa11.33□□□□□ -0.6
C9orf3-217ENST00000479161 TMEM14CQ9P0S9 112 aa11.33□□□□□ -0.6
C9orf3-217ENST00000479161 KNCNA6PVL3 124 aa11.32□□□□□ -0.6
C9orf3-217ENST00000479161 ZNF253O75346 499 aa11.32□□□□□ -0.6
C9orf3-217ENST00000479161 IFNA5P01569 189 aa11.32□□□□□ -0.6
C9orf3-217ENST00000479161 GIG44P09565 113 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms