RNA–Protein interactions for RNA: ENST00000478603.5

C9orf3-216, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-216ENST00000478603 BTCP35070 178 aa16.3■□□□□ 0.2
C9orf3-216ENST00000478603 RRAS2P62070 204 aaPredicted RBP16.3■□□□□ 0.2
C9orf3-216ENST00000478603 C7orf50Q9BRJ6 194 aaKnown RBP16.3■□□□□ 0.2
C9orf3-216ENST00000478603 NDUFAF3Q9BU61 184 aa16.3■□□□□ 0.2
C9orf3-216ENST00000478603 H3BRN7 92 aa16.29■□□□□ 0.2
C9orf3-216ENST00000478603 SCGB1D2O95969 90 aa16.29■□□□□ 0.2
C9orf3-216ENST00000478603 FGL1Q08830 312 aa16.29■□□□□ 0.2
C9orf3-216ENST00000478603 C4orf46Q504U0 113 aa16.29■□□□□ 0.2
C9orf3-216ENST00000478603 FAM222AQ5U5X8 452 aa16.29■□□□□ 0.2
C9orf3-216ENST00000478603 AMTNQ6UX39 209 aa16.29■□□□□ 0.2
C9orf3-216ENST00000478603 RNF182Q8N6D2 247 aa16.29■□□□□ 0.2
C9orf3-216ENST00000478603 SMIM8Q96KF7 97 aa16.29■□□□□ 0.2
C9orf3-216ENST00000478603 GPR82Q96P67 336 aa16.29■□□□□ 0.2
C9orf3-216ENST00000478603 SLC25A39Q9BZJ4 359 aaPredicted RBP16.29■□□□□ 0.2
C9orf3-216ENST00000478603 DKK2Q9UBU2 259 aa16.29■□□□□ 0.2
C9orf3-216ENST00000478603 TRAV8-2A0A0B4J237 113 aa16.28■□□□□ 0.2
C9orf3-216ENST00000478603 METTL15P1P0C7V9 234 aa16.28■□□□□ 0.2
C9orf3-216ENST00000478603 HIGD1AQ9Y241 93 aa16.28■□□□□ 0.2
C9orf3-216ENST00000478603 LOC102723971A0A1B0GUV8 181 aa16.27■□□□□ 0.2
C9orf3-216ENST00000478603 A8MTW9 85 aa16.27■□□□□ 0.2
C9orf3-216ENST00000478603 HBE1P02100 147 aa16.27■□□□□ 0.2
C9orf3-216ENST00000478603 LINC00869P0C866 280 aa16.27■□□□□ 0.2
C9orf3-216ENST00000478603 UHRF2Q96PU4 802 aa16.27■□□□□ 0.2
C9orf3-216ENST00000478603 SHANK2-AS3Q9BTD1 123 aa16.27■□□□□ 0.2
C9orf3-216ENST00000478603 CENPXA8MT69 81 aa16.26■□□□□ 0.19
C9orf3-216ENST00000478603 OR5G3P0C626 314 aa16.26■□□□□ 0.19
C9orf3-216ENST00000478603 S100A7P31151 101 aa16.26■□□□□ 0.19
C9orf3-216ENST00000478603 CNN1P51911 297 aaKnown RBP16.26■□□□□ 0.19
C9orf3-216ENST00000478603 RAP2BP61225 183 aa16.26■□□□□ 0.19
C9orf3-216ENST00000478603 IAH1Q2TAA2 248 aaPredicted RBP16.26■□□□□ 0.19
C9orf3-216ENST00000478603 TMEM14EPQ6UXP3 125 aa16.26■□□□□ 0.19
C9orf3-216ENST00000478603 NIPSNAP3BQ9BS92 247 aa16.26■□□□□ 0.19
C9orf3-216ENST00000478603 YTHDF2Q9Y5A9 579 aaKnown RBP16.26■□□□□ 0.19
C9orf3-216ENST00000478603 M0R2Z0 102 aa16.25■□□□□ 0.19
C9orf3-216ENST00000478603 HYPMO75409 117 aa16.25■□□□□ 0.19
C9orf3-216ENST00000478603 P0DMU3 169 aa16.25■□□□□ 0.19
C9orf3-216ENST00000478603 FAM231AP0DMU4 169 aa16.25■□□□□ 0.19
C9orf3-216ENST00000478603 FAM231CP0DMU5 169 aa16.25■□□□□ 0.19
C9orf3-216ENST00000478603 IL7P13232 177 aa16.25■□□□□ 0.19
C9orf3-216ENST00000478603 DLK1P80370 383 aa16.25■□□□□ 0.19
C9orf3-216ENST00000478603 SPINK13Q1W4C9 94 aa16.25■□□□□ 0.19
C9orf3-216ENST00000478603 RRN3P1Q2M238 152 aa16.25■□□□□ 0.19
C9orf3-216ENST00000478603 POM121L12Q8N7R1 296 aa16.25■□□□□ 0.19
C9orf3-216ENST00000478603 OR11H7Q8NGC8 314 aa16.25■□□□□ 0.19
C9orf3-216ENST00000478603 IGF2BP2-AS1Q96M15 143 aa16.25■□□□□ 0.19
C9orf3-216ENST00000478603 GSKIPQ9P0R6 139 aa16.25■□□□□ 0.19
C9orf3-216ENST00000478603 PRM2P04554 102 aa16.24■□□□□ 0.19
C9orf3-216ENST00000478603 HTN3P15516 51 aa16.24■□□□□ 0.19
C9orf3-216ENST00000478603 PLP1P60201 277 aa16.24■□□□□ 0.19
C9orf3-216ENST00000478603 ZBTB8BQ8NAP8 495 aaPredicted RBP16.24■□□□□ 0.19
C9orf3-216ENST00000478603 TMEM208Q9BTX3 173 aa16.24■□□□□ 0.19
C9orf3-216ENST00000478603 RCL1Q9Y2P8 373 aaKnown RBP16.24■□□□□ 0.19
C9orf3-216ENST00000478603 HECTD4Q9Y4D8 3996 aa16.23■□□□□ 0.19
C9orf3-216ENST00000478603 TEX48A0A1B0GUV7 120 aa16.23■□□□□ 0.19
C9orf3-216ENST00000478603 DUSP14O95147 198 aaKnown RBP16.23■□□□□ 0.19
C9orf3-216ENST00000478603 PRB4P10163 310 aaPredicted RBP16.23■□□□□ 0.19
C9orf3-216ENST00000478603 RPL7P18124 248 aaKnown RBP16.23■□□□□ 0.19
C9orf3-216ENST00000478603 SELENOTP62341 195 aa16.23■□□□□ 0.19
C9orf3-216ENST00000478603 SLC38A11Q08AI6 406 aa16.23■□□□□ 0.19
C9orf3-216ENST00000478603 ZNF738Q8NE65 137 aa16.23■□□□□ 0.19
C9orf3-216ENST00000478603 OR10P1Q8NGE3 313 aa16.23■□□□□ 0.19
C9orf3-216ENST00000478603 NPVFQ9HCQ7 196 aa16.23■□□□□ 0.19
C9orf3-216ENST00000478603 CRXO43186 299 aaPredicted RBP16.22■□□□□ 0.19
C9orf3-216ENST00000478603 ARL16Q0P5N6 197 aa16.22■□□□□ 0.19
C9orf3-216ENST00000478603 PATE2Q6UY27 113 aa16.22■□□□□ 0.19
C9orf3-216ENST00000478603 MITD1Q8WV92 249 aa16.22■□□□□ 0.19
C9orf3-216ENST00000478603 ARL6Q9H0F7 186 aa16.22■□□□□ 0.19
C9orf3-216ENST00000478603 MGAT4CQ9UBM8 478 aa16.22■□□□□ 0.19
C9orf3-216ENST00000478603 ZNF705GA8MUZ8 300 aaPredicted RBP16.21■□□□□ 0.19
C9orf3-216ENST00000478603 M0R2N4 97 aa16.21■□□□□ 0.19
C9orf3-216ENST00000478603 CCSO14618 274 aa16.21■□□□□ 0.19
C9orf3-216ENST00000478603 TSC22D2O75157 780 aa16.21■□□□□ 0.19
C9orf3-216ENST00000478603 BAP18Q8IXM2 172 aa16.21■□□□□ 0.19
C9orf3-216ENST00000478603 C20orf85Q9H1P6 137 aa16.21■□□□□ 0.19
C9orf3-216ENST00000478603 FNDC10F2Z333 226 aa16.2■□□□□ 0.18
C9orf3-216ENST00000478603 PLA2G10O15496 165 aa16.2■□□□□ 0.18
C9orf3-216ENST00000478603 MBPP02686 304 aaPredicted RBP16.2■□□□□ 0.18
C9orf3-216ENST00000478603 TAS2R30P59541 319 aa16.2■□□□□ 0.18
C9orf3-216ENST00000478603 OXA1LQ15070 435 aa16.2■□□□□ 0.18
C9orf3-216ENST00000478603 TEPPQ6URK8 271 aa16.2■□□□□ 0.18
C9orf3-216ENST00000478603 ARV1Q9H2C2 271 aa16.2■□□□□ 0.18
C9orf3-216ENST00000478603 TRAV12-2A0A075B6T6 113 aa16.19■□□□□ 0.18
C9orf3-216ENST00000478603 C7orf66A4D0T2 115 aa16.19■□□□□ 0.18
C9orf3-216ENST00000478603 INSP01308 110 aa16.19■□□□□ 0.18
C9orf3-216ENST00000478603 CXCL3P19876 107 aa16.19■□□□□ 0.18
C9orf3-216ENST00000478603 DAD1P61803 113 aa16.19■□□□□ 0.18
C9orf3-216ENST00000478603 HIST1H1AQ02539 215 aaPredicted RBP16.19■□□□□ 0.18
C9orf3-216ENST00000478603 DNAH2Q9P225 4427 aa16.18■□□□□ 0.18
C9orf3-216ENST00000478603 FAT2Q9NYQ8 4349 aa16.18■□□□□ 0.18
C9orf3-216ENST00000478603 A0A087X0K7 114 aa16.18■□□□□ 0.18
C9orf3-216ENST00000478603 K7EPK0 472 aa16.18■□□□□ 0.18
C9orf3-216ENST00000478603 LRRC20Q8TCA0 184 aa16.18■□□□□ 0.18
C9orf3-216ENST00000478603 FAM210BQ96KR6 192 aa16.18■□□□□ 0.18
C9orf3-216ENST00000478603 HERC2O95714 4834 aa16.17■□□□□ 0.18
C9orf3-216ENST00000478603 BOLA2-SMG1P6H3BVE0 249 aa16.17■□□□□ 0.18
C9orf3-216ENST00000478603 GOSR2O14653 212 aa16.17■□□□□ 0.18
C9orf3-216ENST00000478603 AGPAT2O15120 278 aa16.17■□□□□ 0.18
C9orf3-216ENST00000478603 MRPS12O15235 138 aaKnown RBP16.17■□□□□ 0.18
C9orf3-216ENST00000478603 LYRM1O43325 122 aa16.17■□□□□ 0.18
C9orf3-216ENST00000478603 SNRPCP09234 159 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms