RNA–Protein interactions for RNA: ENST00000478082.5

PLOD3-212, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 1,585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-212ENST00000478082 RSG1Q9BU20 258 aa13.75□□□□□ -0.21
PLOD3-212ENST00000478082 FBXL17Q9UF56 701 aa13.75□□□□□ -0.21
PLOD3-212ENST00000478082 AGRNO00468 2067 aa13.75□□□□□ -0.21
PLOD3-212ENST00000478082 LINC00305Q7Z4B0 112 aa13.75□□□□□ -0.21
PLOD3-212ENST00000478082 NPCDR1Q9BY65 106 aa13.75□□□□□ -0.21
PLOD3-212ENST00000478082 WFDC1Q9HC57 220 aa13.75□□□□□ -0.21
PLOD3-212ENST00000478082 COX7A2P2O60397 106 aa13.74□□□□□ -0.21
PLOD3-212ENST00000478082 SNRPCP09234 159 aaKnown RBP13.74□□□□□ -0.21
PLOD3-212ENST00000478082 B2MP61769 119 aa13.74□□□□□ -0.21
PLOD3-212ENST00000478082 RAB31Q13636 194 aa13.74□□□□□ -0.21
PLOD3-212ENST00000478082 GCSAMLQ5JQS6 135 aa13.74□□□□□ -0.21
PLOD3-212ENST00000478082 IGFL4Q6B9Z1 124 aa13.74□□□□□ -0.21
PLOD3-212ENST00000478082 C20orf173Q96LM9 149 aa13.74□□□□□ -0.21
PLOD3-212ENST00000478082 SLC39A9Q9NUM3 307 aa13.74□□□□□ -0.21
PLOD3-212ENST00000478082 PXMP4Q9Y6I8 212 aa13.74□□□□□ -0.21
PLOD3-212ENST00000478082 TRAV5A0A0B4J249 113 aa13.73□□□□□ -0.21
PLOD3-212ENST00000478082 MRPS12O15235 138 aaKnown RBP13.73□□□□□ -0.21
PLOD3-212ENST00000478082 GIPP09681 153 aaPredicted RBP13.73□□□□□ -0.21
PLOD3-212ENST00000478082 GALR1P47211 349 aa13.73□□□□□ -0.21
PLOD3-212ENST00000478082 RPL29P47914 159 aaKnown RBP13.73□□□□□ -0.21
PLOD3-212ENST00000478082 ACTL10Q5JWF8 245 aa13.73□□□□□ -0.21
PLOD3-212ENST00000478082 CHAC2Q8WUX2 184 aa13.73□□□□□ -0.21
PLOD3-212ENST00000478082 LINC00052Q96N35 136 aa13.73□□□□□ -0.21
PLOD3-212ENST00000478082 WDR61Q9GZS3 305 aaKnown RBP13.73□□□□□ -0.21
PLOD3-212ENST00000478082 PRB4P10163 310 aaPredicted RBP13.72□□□□□ -0.21
PLOD3-212ENST00000478082 DEFB135Q30KP9 77 aa13.72□□□□□ -0.21
PLOD3-212ENST00000478082 GDF5OSQ5U4N7 250 aa13.72□□□□□ -0.21
PLOD3-212ENST00000478082 C10orf113Q5VZT2 155 aa13.72□□□□□ -0.21
PLOD3-212ENST00000478082 ATP5SQ99766 215 aa13.72□□□□□ -0.21
PLOD3-212ENST00000478082 OVOL2Q9BRP0 275 aa13.72□□□□□ -0.21
PLOD3-212ENST00000478082 RFNGQ9Y644 331 aa13.72□□□□□ -0.21
PLOD3-212ENST00000478082 STAB2Q8WWQ8 2551 aa13.72□□□□□ -0.21
PLOD3-212ENST00000478082 G3V3Q6 166 aa13.71□□□□□ -0.21
PLOD3-212ENST00000478082 APOC4P55056 127 aa13.71□□□□□ -0.21
PLOD3-212ENST00000478082 SNRPD3P62318 126 aaKnown RBP13.71□□□□□ -0.21
PLOD3-212ENST00000478082 FGL1Q08830 312 aa13.71□□□□□ -0.21
PLOD3-212ENST00000478082 PXDC1Q5TGL8 231 aa13.71□□□□□ -0.21
PLOD3-212ENST00000478082 Q6ZRG5 221 aa13.71□□□□□ -0.21
PLOD3-212ENST00000478082 TRPT1Q86TN4 253 aaKnown RBP13.71□□□□□ -0.21
PLOD3-212ENST00000478082 STHQ8IWL8 128 aa13.71□□□□□ -0.21
PLOD3-212ENST00000478082 DNAJC4Q9NNZ3 241 aa13.71□□□□□ -0.21
PLOD3-212ENST00000478082 DNAH7Q8WXX0 4024 aa13.71□□□□□ -0.21
PLOD3-212ENST00000478082 TRAV8-2A0A0B4J237 113 aa13.71□□□□□ -0.22
PLOD3-212ENST00000478082 C16orf92Q96LL3 132 aa13.71□□□□□ -0.22
PLOD3-212ENST00000478082 hCG_2014768A0A024R1R8 64 aa13.7□□□□□ -0.22
PLOD3-212ENST00000478082 KIR2DL5BA0A0G2JN68 375 aa13.7□□□□□ -0.22
PLOD3-212ENST00000478082 KIR2DL5BA0A0G2JPC4 375 aa13.7□□□□□ -0.22
PLOD3-212ENST00000478082 F6UB75 175 aa13.7□□□□□ -0.22
PLOD3-212ENST00000478082 MPDU1O75352 247 aa13.7□□□□□ -0.22
PLOD3-212ENST00000478082 PSMB3P49720 205 aa13.7□□□□□ -0.22
PLOD3-212ENST00000478082 KIR2DL5AQ8N109 375 aa13.7□□□□□ -0.22
PLOD3-212ENST00000478082 RNF182Q8N6D2 247 aa13.7□□□□□ -0.22
PLOD3-212ENST00000478082 KIR2DL5BQ8NHK3 375 aa13.7□□□□□ -0.22
PLOD3-212ENST00000478082 WWC2-AS2Q96NR7 200 aa13.7□□□□□ -0.22
PLOD3-212ENST00000478082 CSTL1Q9H114 145 aa13.7□□□□□ -0.22
PLOD3-212ENST00000478082 ELOA3CA0A087WX78 387 aaPredicted RBP13.69□□□□□ -0.22
PLOD3-212ENST00000478082 SMLR1H3BR10 107 aa13.69□□□□□ -0.22
PLOD3-212ENST00000478082 H3BTX0 84 aa13.69□□□□□ -0.22
PLOD3-212ENST00000478082 GIG44P09565 113 aaPredicted RBP13.69□□□□□ -0.22
PLOD3-212ENST00000478082 RPL7P18124 248 aaKnown RBP13.69□□□□□ -0.22
PLOD3-212ENST00000478082 C4BPBP20851 252 aa13.69□□□□□ -0.22
PLOD3-212ENST00000478082 HLA-DMBP28068 263 aa13.69□□□□□ -0.22
PLOD3-212ENST00000478082 GPR82Q96P67 336 aa13.69□□□□□ -0.22
PLOD3-212ENST00000478082 SEPSECSQ9HD40 501 aaKnown RBP13.69□□□□□ -0.22
PLOD3-212ENST00000478082 ISLRO14498 428 aa13.68□□□□□ -0.22
PLOD3-212ENST00000478082 CA1P00915 261 aaPredicted RBP13.68□□□□□ -0.22
PLOD3-212ENST00000478082 ATF4P18848 351 aaPredicted RBP13.68□□□□□ -0.22
PLOD3-212ENST00000478082 S100A7P31151 101 aa13.68□□□□□ -0.22
PLOD3-212ENST00000478082 SPATA31B1PQ5VZV4 182 aa13.68□□□□□ -0.22
PLOD3-212ENST00000478082 OR1L4Q8NGR5 311 aa13.68□□□□□ -0.22
PLOD3-212ENST00000478082 OR2T35Q8NGX2 323 aa13.68□□□□□ -0.22
PLOD3-212ENST00000478082 EDA2RQ9HAV5 297 aa13.68□□□□□ -0.22
PLOD3-212ENST00000478082 ID1P41134 155 aa13.67□□□□□ -0.22
PLOD3-212ENST00000478082 Q6ZWC4 215 aa13.67□□□□□ -0.22
PLOD3-212ENST00000478082 A0A087X0K7 114 aa13.66□□□□□ -0.22
PLOD3-212ENST00000478082 H3BMM0 161 aa13.66□□□□□ -0.22
PLOD3-212ENST00000478082 IGKV3-20P01619 116 aa13.66□□□□□ -0.22
PLOD3-212ENST00000478082 MEOX2P50222 304 aa13.66□□□□□ -0.22
PLOD3-212ENST00000478082 AQP10Q96PS8 301 aa13.66□□□□□ -0.22
PLOD3-212ENST00000478082 PFDN5Q99471 154 aa13.66□□□□□ -0.22
PLOD3-212ENST00000478082 FXYD6-FXYD2A0A087WZ82 144 aa13.66□□□□□ -0.22
PLOD3-212ENST00000478082 RNF222A6NCQ9 220 aa13.66□□□□□ -0.22
PLOD3-212ENST00000478082 H3BQ15 152 aa13.66□□□□□ -0.22
PLOD3-212ENST00000478082 SLC17A3O00476 420 aa13.66□□□□□ -0.22
PLOD3-212ENST00000478082 UBE2CO00762 179 aa13.66□□□□□ -0.22
PLOD3-212ENST00000478082 SPRY2O43597 315 aa13.66□□□□□ -0.22
PLOD3-212ENST00000478082 HLA-DRB4P13762 266 aa13.66□□□□□ -0.22
PLOD3-212ENST00000478082 ASB13Q8WXK3 278 aa13.66□□□□□ -0.22
PLOD3-212ENST00000478082 RNF183Q96D59 192 aa13.66□□□□□ -0.22
PLOD3-212ENST00000478082 SAV1Q9H4B6 383 aaPredicted RBP13.66□□□□□ -0.22
PLOD3-212ENST00000478082 HLA-DRB4X5D2U9 266 aa13.66□□□□□ -0.22
PLOD3-212ENST00000478082 IGLC2P0DOY2 106 aa13.65□□□□□ -0.22
PLOD3-212ENST00000478082 MIR17HGQ75NE6 70 aa13.65□□□□□ -0.22
PLOD3-212ENST00000478082 S100A7AQ86SG5 101 aa13.65□□□□□ -0.22
PLOD3-212ENST00000478082 BPIFA4PQ86YQ2 179 aa13.65□□□□□ -0.22
PLOD3-212ENST00000478082 ZNF709Q8N972 641 aa13.65□□□□□ -0.22
PLOD3-212ENST00000478082 CLEC5AQ9NY25 188 aa13.65□□□□□ -0.22
PLOD3-212ENST00000478082 EIF3GO75821 320 aaKnown RBP eCLIP13.64□□□□□ -0.23
PLOD3-212ENST00000478082 IFNA5P01569 189 aa13.64□□□□□ -0.23
PLOD3-212ENST00000478082 ZNF705DP0CH99 300 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms