RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 C3orf84H3BNL1 204 aa9.14□□□□□ -0.95
CLCNKA-205ENST00000477360 IFNA5P01569 189 aa9.14□□□□□ -0.95
CLCNKA-205ENST00000477360 ATF4P18848 351 aaPredicted RBP9.14□□□□□ -0.95
CLCNKA-205ENST00000477360 CXCL2P19875 107 aa9.14□□□□□ -0.95
CLCNKA-205ENST00000477360 FGF7P21781 194 aa9.14□□□□□ -0.95
CLCNKA-205ENST00000477360 CAMLGP49069 296 aa9.14□□□□□ -0.95
CLCNKA-205ENST00000477360 PRR20EP86478 221 aa9.14□□□□□ -0.95
CLCNKA-205ENST00000477360 PRR20CP86479 221 aa9.14□□□□□ -0.95
CLCNKA-205ENST00000477360 PRR20DP86480 221 aa9.14□□□□□ -0.95
CLCNKA-205ENST00000477360 PRR20BP86481 221 aa9.14□□□□□ -0.95
CLCNKA-205ENST00000477360 PRR20AP86496 221 aa9.14□□□□□ -0.95
CLCNKA-205ENST00000477360 ZFP69Q49AA0 526 aa9.14□□□□□ -0.95
CLCNKA-205ENST00000477360 GBGT1Q8N5D6 347 aa9.14□□□□□ -0.95
CLCNKA-205ENST00000477360 OR1B1Q8NGR6 318 aa9.14□□□□□ -0.95
CLCNKA-205ENST00000477360 EDA2RQ9HAV5 297 aa9.14□□□□□ -0.95
CLCNKA-205ENST00000477360 WFDC1Q9HC57 220 aa9.14□□□□□ -0.95
CLCNKA-205ENST00000477360 KCNIP2Q9NS61 270 aa9.14□□□□□ -0.95
CLCNKA-205ENST00000477360 ELOA3CA0A087WX78 387 aaPredicted RBP9.13□□□□□ -0.95
CLCNKA-205ENST00000477360 ZNF98A6NK75 572 aa9.13□□□□□ -0.95
CLCNKA-205ENST00000477360 ISLRO14498 428 aa9.13□□□□□ -0.95
CLCNKA-205ENST00000477360 HYPMO75409 117 aa9.13□□□□□ -0.95
CLCNKA-205ENST00000477360 JTBO76095 146 aa9.13□□□□□ -0.95
CLCNKA-205ENST00000477360 GALR1P47211 349 aa9.13□□□□□ -0.95
CLCNKA-205ENST00000477360 TFPI2P48307 235 aa9.13□□□□□ -0.95
CLCNKA-205ENST00000477360 SPATA31B1PQ5VZV4 182 aa9.13□□□□□ -0.95
CLCNKA-205ENST00000477360 OR8I2Q8N0Y5 310 aa9.13□□□□□ -0.95
CLCNKA-205ENST00000477360 GATAD1Q8WUU5 269 aa9.13□□□□□ -0.95
CLCNKA-205ENST00000477360 CLUHP3Q96NS8 147 aa9.13□□□□□ -0.95
CLCNKA-205ENST00000477360 NPCDR1Q9BY65 106 aa9.13□□□□□ -0.95
CLCNKA-205ENST00000477360 SMIM3Q9BZL3 60 aa9.13□□□□□ -0.95
CLCNKA-205ENST00000477360 CSTL1Q9H114 145 aa9.13□□□□□ -0.95
CLCNKA-205ENST00000477360 UBQLN2Q9UHD9 624 aa9.13□□□□□ -0.95
CLCNKA-205ENST00000477360 TIMM9Q9Y5J7 89 aa9.13□□□□□ -0.95
CLCNKA-205ENST00000477360 SELENOKQ9Y6D0 94 aa9.13□□□□□ -0.95
CLCNKA-205ENST00000477360 NBEAL2Q6ZNJ1 2754 aa9.13□□□□□ -0.95
CLCNKA-205ENST00000477360 IGKV3-7A0A075B6H7 116 aa9.12□□□□□ -0.95
CLCNKA-205ENST00000477360 BORCS7-ASMTA0A0B4J1R7 106 aa9.12□□□□□ -0.95
CLCNKA-205ENST00000477360 C17orf112F2Z3M2 114 aa9.12□□□□□ -0.95
CLCNKA-205ENST00000477360 LINC00869P0C866 280 aa9.12□□□□□ -0.95
CLCNKA-205ENST00000477360 SPP1P10451 314 aa9.12□□□□□ -0.95
CLCNKA-205ENST00000477360 RPL7P18124 248 aaKnown RBP9.12□□□□□ -0.95
CLCNKA-205ENST00000477360 ID1P41134 155 aa9.12□□□□□ -0.95
CLCNKA-205ENST00000477360 PSMB3P49720 205 aa9.12□□□□□ -0.95
CLCNKA-205ENST00000477360 DEFB131AP59861 70 aa9.12□□□□□ -0.95
CLCNKA-205ENST00000477360 LGALSLQ3ZCW2 172 aaPredicted RBP9.12□□□□□ -0.95
CLCNKA-205ENST00000477360 MORN3Q6PF18 240 aaPredicted RBP9.12□□□□□ -0.95
CLCNKA-205ENST00000477360 TMEM182Q6ZP80 229 aaPredicted RBP9.12□□□□□ -0.95
CLCNKA-205ENST00000477360 IL17DQ8TAD2 202 aa9.12□□□□□ -0.95
CLCNKA-205ENST00000477360 SCGB1C1Q8TD33 95 aa9.12□□□□□ -0.95
CLCNKA-205ENST00000477360 PPP1R14BQ96C90 147 aa9.12□□□□□ -0.95
CLCNKA-205ENST00000477360 ARPC5LQ9BPX5 153 aa9.12□□□□□ -0.95
CLCNKA-205ENST00000477360 PSMG3Q9BT73 122 aaPredicted RBP9.12□□□□□ -0.95
CLCNKA-205ENST00000477360 SHANK2-AS3Q9BTD1 123 aa9.12□□□□□ -0.95
CLCNKA-205ENST00000477360 ARV1Q9H2C2 271 aa9.12□□□□□ -0.95
CLCNKA-205ENST00000477360 CYTL1Q9NRR1 136 aa9.12□□□□□ -0.95
CLCNKA-205ENST00000477360 H3BRN7 92 aa9.11□□□□□ -0.95
CLCNKA-205ENST00000477360 BCL2L11O43521 198 aa9.11□□□□□ -0.95
CLCNKA-205ENST00000477360 PFDN1O60925 122 aa9.11□□□□□ -0.95
CLCNKA-205ENST00000477360 ORM2P19652 201 aa9.11□□□□□ -0.95
CLCNKA-205ENST00000477360 RPL7L1Q6DKI1 246 aaKnown RBP9.11□□□□□ -0.95
CLCNKA-205ENST00000477360 APRG1Q8IVJ8 170 aa9.11□□□□□ -0.95
CLCNKA-205ENST00000477360 ZNF709Q8N972 641 aa9.11□□□□□ -0.95
CLCNKA-205ENST00000477360 OR2G3Q8NGZ4 309 aa9.11□□□□□ -0.95
CLCNKA-205ENST00000477360 RNF183Q96D59 192 aa9.11□□□□□ -0.95
CLCNKA-205ENST00000477360 SLC25A39Q9BZJ4 359 aaPredicted RBP9.11□□□□□ -0.95
CLCNKA-205ENST00000477360 ARL6Q9H0F7 186 aa9.11□□□□□ -0.95
CLCNKA-205ENST00000477360 SLC39A9Q9NUM3 307 aa9.11□□□□□ -0.95
CLCNKA-205ENST00000477360 HIGD1AQ9Y241 93 aa9.11□□□□□ -0.95
CLCNKA-205ENST00000477360 KANTRA0A1W2PQU2 76 aa9.1□□□□□ -0.95
CLCNKA-205ENST00000477360 SOCS3O14543 225 aa9.1□□□□□ -0.95
CLCNKA-205ENST00000477360 SPRY2O43597 315 aa9.1□□□□□ -0.95
CLCNKA-205ENST00000477360 GATA2P23769 480 aaPredicted RBP9.1□□□□□ -0.95
CLCNKA-205ENST00000477360 B2MP61769 119 aa9.1□□□□□ -0.95
CLCNKA-205ENST00000477360 SERF2P84101 59 aa9.1□□□□□ -0.95
CLCNKA-205ENST00000477360 MIC13Q5XKP0 118 aa9.1□□□□□ -0.95
CLCNKA-205ENST00000477360 Q6ZRG5 221 aa9.1□□□□□ -0.95
CLCNKA-205ENST00000477360 TMUB2Q71RG4 321 aa9.1□□□□□ -0.95
CLCNKA-205ENST00000477360 TRPT1Q86TN4 253 aaKnown RBP9.1□□□□□ -0.95
CLCNKA-205ENST00000477360 STHQ8IWL8 128 aa9.1□□□□□ -0.95
CLCNKA-205ENST00000477360 C9orf62Q8N4C0 152 aa9.1□□□□□ -0.95
CLCNKA-205ENST00000477360 MUC7Q8TAX7 377 aa9.1□□□□□ -0.95
CLCNKA-205ENST00000477360 GNPNAT1Q96EK6 184 aaPredicted RBP9.1□□□□□ -0.95
CLCNKA-205ENST00000477360 PFDN5Q99471 154 aa9.1□□□□□ -0.95
CLCNKA-205ENST00000477360 OVOL2Q9BRP0 275 aa9.1□□□□□ -0.95
CLCNKA-205ENST00000477360 PXMP4Q9Y6I8 212 aa9.1□□□□□ -0.95
CLCNKA-205ENST00000477360 ZNF688P0C7X2 276 aa9.09□□□□□ -0.95
CLCNKA-205ENST00000477360 C4BPBP20851 252 aa9.09□□□□□ -0.95
CLCNKA-205ENST00000477360 ATP6V0CP27449 155 aa9.09□□□□□ -0.95
CLCNKA-205ENST00000477360 NUTF2P61970 127 aaKnown RBP9.09□□□□□ -0.95
CLCNKA-205ENST00000477360 EIF5AP63241 154 aaKnown RBP9.09□□□□□ -0.95
CLCNKA-205ENST00000477360 PATE2Q6UY27 113 aa9.09□□□□□ -0.95
CLCNKA-205ENST00000477360 FAM24BQ8N5W8 94 aa9.09□□□□□ -0.95
CLCNKA-205ENST00000477360 OR1L4Q8NGR5 311 aa9.09□□□□□ -0.95
CLCNKA-205ENST00000477360 STOML3Q8TAV4 291 aa9.09□□□□□ -0.95
CLCNKA-205ENST00000477360 RSG1Q9BU20 258 aa9.09□□□□□ -0.95
CLCNKA-205ENST00000477360 C1QTNF4Q9BXJ3 329 aa9.09□□□□□ -0.95
CLCNKA-205ENST00000477360 A0A087X0K7 114 aa9.08□□□□□ -0.96
CLCNKA-205ENST00000477360 HLA-DRB4P13762 266 aa9.08□□□□□ -0.96
CLCNKA-205ENST00000477360 PSMG4Q5JS54 123 aa9.08□□□□□ -0.96
CLCNKA-205ENST00000477360 FOXI2Q6ZQN5 318 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms