RNA–Protein interactions for RNA: ENST00000477169.5

SMARCD3-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-210ENST00000477169 ARPC5O15511 151 aa12.79□□□□□ -0.36
SMARCD3-210ENST00000477169 AP2S1P53680 142 aaPredicted RBP12.79□□□□□ -0.36
SMARCD3-210ENST00000477169 B2MP61769 119 aa12.79□□□□□ -0.36
SMARCD3-210ENST00000477169 RPL11P62913 178 aaKnown RBP12.79□□□□□ -0.36
SMARCD3-210ENST00000477169 IL17DQ8TAD2 202 aa12.79□□□□□ -0.36
SMARCD3-210ENST00000477169 SCGB1C1Q8TD33 95 aa12.79□□□□□ -0.36
SMARCD3-210ENST00000477169 UHRF2Q96PU4 802 aa12.79□□□□□ -0.36
SMARCD3-210ENST00000477169 SHANK2-AS3Q9BTD1 123 aa12.79□□□□□ -0.36
SMARCD3-210ENST00000477169 SCRT1Q9BWW7 348 aa12.79□□□□□ -0.36
SMARCD3-210ENST00000477169 ARV1Q9H2C2 271 aa12.79□□□□□ -0.36
SMARCD3-210ENST00000477169 MS4A6AQ9H2W1 248 aa12.79□□□□□ -0.36
SMARCD3-210ENST00000477169 LCE6AA0A183 80 aa12.78□□□□□ -0.36
SMARCD3-210ENST00000477169 HELTA6NFD8 242 aa12.78□□□□□ -0.36
SMARCD3-210ENST00000477169 COX7A2P2O60397 106 aa12.78□□□□□ -0.36
SMARCD3-210ENST00000477169 S100A7P31151 101 aa12.78□□□□□ -0.36
SMARCD3-210ENST00000477169 TFPI2P48307 235 aa12.78□□□□□ -0.36
SMARCD3-210ENST00000477169 PAFAH1B2P68402 229 aa12.78□□□□□ -0.36
SMARCD3-210ENST00000477169 LEMD1Q68G75 181 aa12.78□□□□□ -0.36
SMARCD3-210ENST00000477169 SIGLEC15Q6ZMC9 328 aa12.78□□□□□ -0.36
SMARCD3-210ENST00000477169 Q6ZRG5 221 aa12.78□□□□□ -0.36
SMARCD3-210ENST00000477169 TCTE3Q8IZS6 198 aa12.78□□□□□ -0.36
SMARCD3-210ENST00000477169 ZNF709Q8N972 641 aa12.78□□□□□ -0.36
SMARCD3-210ENST00000477169 TMEM37Q8WXS4 190 aa12.78□□□□□ -0.36
SMARCD3-210ENST00000477169 FAM110AQ9BQ89 295 aa12.78□□□□□ -0.36
SMARCD3-210ENST00000477169 RSG1Q9BU20 258 aa12.78□□□□□ -0.36
SMARCD3-210ENST00000477169 DNAJC4Q9NNZ3 241 aa12.78□□□□□ -0.36
SMARCD3-210ENST00000477169 ELOA3CA0A087WX78 387 aaPredicted RBP12.77□□□□□ -0.37
SMARCD3-210ENST00000477169 LOC102724200A0A096LPH7 203 aaPredicted RBP12.77□□□□□ -0.37
SMARCD3-210ENST00000477169 OR4C46A6NHA9 309 aa12.77□□□□□ -0.37
SMARCD3-210ENST00000477169 HMSDA8MTL9 139 aa12.77□□□□□ -0.37
SMARCD3-210ENST00000477169 WFDC3Q8IUB2 231 aa12.77□□□□□ -0.37
SMARCD3-210ENST00000477169 OR8I2Q8N0Y5 310 aa12.77□□□□□ -0.37
SMARCD3-210ENST00000477169 STXBP6Q8NFX7 210 aa12.77□□□□□ -0.37
SMARCD3-210ENST00000477169 MFFQ9GZY8 342 aa12.77□□□□□ -0.37
SMARCD3-210ENST00000477169 SLC25A32Q9H2D1 315 aa12.77□□□□□ -0.37
SMARCD3-210ENST00000477169 SLC25A22Q9H936 323 aa12.77□□□□□ -0.37
SMARCD3-210ENST00000477169 TRAV2A0A0B4J234 112 aa12.76□□□□□ -0.37
SMARCD3-210ENST00000477169 C17orf112F2Z3M2 114 aa12.76□□□□□ -0.37
SMARCD3-210ENST00000477169 DNASE2O00115 360 aaPredicted RBP12.76□□□□□ -0.37
SMARCD3-210ENST00000477169 ZNF266Q14584 549 aa12.76□□□□□ -0.37
SMARCD3-210ENST00000477169 C10orf113Q5VZT2 155 aa12.76□□□□□ -0.37
SMARCD3-210ENST00000477169 LINC00305Q7Z4B0 112 aa12.76□□□□□ -0.37
SMARCD3-210ENST00000477169 S100A7AQ86SG5 101 aa12.76□□□□□ -0.37
SMARCD3-210ENST00000477169 AKAP14Q86UN6 197 aa12.76□□□□□ -0.37
SMARCD3-210ENST00000477169 OR1L4Q8NGR5 311 aa12.76□□□□□ -0.37
SMARCD3-210ENST00000477169 KCNIP2Q9NS61 270 aa12.76□□□□□ -0.37
SMARCD3-210ENST00000477169 RFNGQ9Y644 331 aa12.76□□□□□ -0.37
SMARCD3-210ENST00000477169 K7EQG2 157 aa12.75□□□□□ -0.37
SMARCD3-210ENST00000477169 GCSAMLQ5JQS6 135 aa12.75□□□□□ -0.37
SMARCD3-210ENST00000477169 MORN5Q5VZ52 161 aa12.75□□□□□ -0.37
SMARCD3-210ENST00000477169 DCANP1Q8TF63 244 aa12.75□□□□□ -0.37
SMARCD3-210ENST00000477169 PFDN5Q99471 154 aa12.75□□□□□ -0.37
SMARCD3-210ENST00000477169 ODF3L2Q3SX64 289 aa12.74□□□□□ -0.37
SMARCD3-210ENST00000477169 RPL7L1Q6DKI1 246 aaKnown RBP12.74□□□□□ -0.37
SMARCD3-210ENST00000477169 KCNRGQ8N5I3 272 aa12.74□□□□□ -0.37
SMARCD3-210ENST00000477169 FAM24BQ8N5W8 94 aa12.74□□□□□ -0.37
SMARCD3-210ENST00000477169 GATAD1Q8WUU5 269 aa12.74□□□□□ -0.37
SMARCD3-210ENST00000477169 GPR82Q96P67 336 aa12.74□□□□□ -0.37
SMARCD3-210ENST00000477169 NRN1Q9NPD7 142 aa12.74□□□□□ -0.37
SMARCD3-210ENST00000477169 UBQLN2Q9UHD9 624 aa12.74□□□□□ -0.37
SMARCD3-210ENST00000477169 CXCL2P19875 107 aa12.73□□□□□ -0.37
SMARCD3-210ENST00000477169 GALR1P47211 349 aa12.73□□□□□ -0.37
SMARCD3-210ENST00000477169 CD300CQ08708 224 aa12.73□□□□□ -0.37
SMARCD3-210ENST00000477169 ZNF345Q14585 488 aa12.73□□□□□ -0.37
SMARCD3-210ENST00000477169 FFAR4Q5NUL3 377 aa12.73□□□□□ -0.37
SMARCD3-210ENST00000477169 HSD17B11Q8NBQ5 300 aa12.73□□□□□ -0.37
SMARCD3-210ENST00000477169 C17orf77Q96MU5 243 aa12.73□□□□□ -0.37
SMARCD3-210ENST00000477169 OVOL2Q9BRP0 275 aa12.73□□□□□ -0.37
SMARCD3-210ENST00000477169 TIMM9Q9Y5J7 89 aa12.73□□□□□ -0.37
SMARCD3-210ENST00000477169 BORCS7-ASMTA0A0B4J1R7 106 aa12.72□□□□□ -0.37
SMARCD3-210ENST00000477169 TAAR5O14804 337 aa12.72□□□□□ -0.37
SMARCD3-210ENST00000477169 C1QBP02746 253 aa12.72□□□□□ -0.37
SMARCD3-210ENST00000477169 RPL7P18124 248 aaKnown RBP12.72□□□□□ -0.37
SMARCD3-210ENST00000477169 MAP6D1Q9H9H5 199 aa12.72□□□□□ -0.37
SMARCD3-210ENST00000477169 CYTL1Q9NRR1 136 aa12.72□□□□□ -0.37
SMARCD3-210ENST00000477169 RNF24Q9Y225 148 aa12.72□□□□□ -0.37
SMARCD3-210ENST00000477169 TRAV5A0A0B4J249 113 aa12.71□□□□□ -0.37
SMARCD3-210ENST00000477169 A0A0D9SG52 128 aa12.71□□□□□ -0.37
SMARCD3-210ENST00000477169 MRPS12O15235 138 aaKnown RBP12.71□□□□□ -0.37
SMARCD3-210ENST00000477169 ATP6V0CP27449 155 aa12.71□□□□□ -0.37
SMARCD3-210ENST00000477169 APOC4P55056 127 aa12.71□□□□□ -0.37
SMARCD3-210ENST00000477169 CMC4P56277 68 aaPredicted RBP12.71□□□□□ -0.37
SMARCD3-210ENST00000477169 SOCS3O14543 225 aa12.7□□□□□ -0.38
SMARCD3-210ENST00000477169 ZNF688P0C7X2 276 aa12.7□□□□□ -0.38
SMARCD3-210ENST00000477169 FAM78BQ5VT40 261 aa12.7□□□□□ -0.38
SMARCD3-210ENST00000477169 SPATA31B1PQ5VZV4 182 aa12.7□□□□□ -0.38
SMARCD3-210ENST00000477169 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.7□□□□□ -0.38
SMARCD3-210ENST00000477169 Q6ZWC4 215 aa12.7□□□□□ -0.38
SMARCD3-210ENST00000477169 ARPC5LQ9BPX5 153 aa12.7□□□□□ -0.38
SMARCD3-210ENST00000477169 PSMG3Q9BT73 122 aaPredicted RBP12.7□□□□□ -0.38
SMARCD3-210ENST00000477169 SH3BGRL3Q9H299 93 aa12.7□□□□□ -0.38
SMARCD3-210ENST00000477169 SEPSECSQ9HD40 501 aaKnown RBP12.7□□□□□ -0.38
SMARCD3-210ENST00000477169 TP53TG1Q9Y2A0 90 aa12.7□□□□□ -0.38
SMARCD3-210ENST00000477169 DNAH1Q9P2D7 4330 aa12.7□□□□□ -0.38
SMARCD3-210ENST00000477169 HYDINQ4G0P3 5121 aa12.69□□□□□ -0.38
SMARCD3-210ENST00000477169 UBE2CO00762 179 aa12.69□□□□□ -0.38
SMARCD3-210ENST00000477169 JTBO76095 146 aa12.69□□□□□ -0.38
SMARCD3-210ENST00000477169 ATF4P18848 351 aaPredicted RBP12.69□□□□□ -0.38
SMARCD3-210ENST00000477169 DEFB131AP59861 70 aa12.69□□□□□ -0.38
SMARCD3-210ENST00000477169 PLECQ15149 4684 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms