RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 WDR61Q9GZS3 305 aaKnown RBP8.86□□□□□ -0.99
CLIP2-204ENST00000474962 HYDINQ4G0P3 5121 aa8.85□□□□□ -0.99
CLIP2-204ENST00000474962 IGKV3-7A0A075B6H7 116 aa8.85□□□□□ -0.99
CLIP2-204ENST00000474962 ELOA3CA0A087WX78 387 aaPredicted RBP8.85□□□□□ -0.99
CLIP2-204ENST00000474962 A0A1B0GVG6 124 aa8.85□□□□□ -0.99
CLIP2-204ENST00000474962 HMSDA8MTL9 139 aa8.85□□□□□ -0.99
CLIP2-204ENST00000474962 DNASE2O00115 360 aaPredicted RBP8.85□□□□□ -0.99
CLIP2-204ENST00000474962 TAAR5O14804 337 aa8.85□□□□□ -0.99
CLIP2-204ENST00000474962 APOHP02749 345 aaPredicted RBP8.85□□□□□ -0.99
CLIP2-204ENST00000474962 TMEM182Q6ZP80 229 aaPredicted RBP8.85□□□□□ -0.99
CLIP2-204ENST00000474962 TCF24Q7RTU0 167 aa8.85□□□□□ -0.99
CLIP2-204ENST00000474962 TCTE3Q8IZS6 198 aa8.85□□□□□ -0.99
CLIP2-204ENST00000474962 OR8I2Q8N0Y5 310 aa8.85□□□□□ -0.99
CLIP2-204ENST00000474962 ZNF414Q96IQ9 312 aa8.85□□□□□ -0.99
CLIP2-204ENST00000474962 PFDN5Q99471 154 aa8.85□□□□□ -0.99
CLIP2-204ENST00000474962 FAM110AQ9BQ89 295 aa8.85□□□□□ -0.99
CLIP2-204ENST00000474962 GGTLC1Q9BX51 225 aa8.85□□□□□ -0.99
CLIP2-204ENST00000474962 VSIRQ9H7M9 311 aa8.85□□□□□ -0.99
CLIP2-204ENST00000474962 SRD5A3Q9H8P0 318 aa8.85□□□□□ -0.99
CLIP2-204ENST00000474962 SLC25A22Q9H936 323 aa8.85□□□□□ -0.99
CLIP2-204ENST00000474962 SLC39A9Q9NUM3 307 aa8.85□□□□□ -0.99
CLIP2-204ENST00000474962 PXMP4Q9Y6I8 212 aa8.85□□□□□ -0.99
CLIP2-204ENST00000474962 DNAH1Q9P2D7 4330 aa8.84□□□□□ -0.99
CLIP2-204ENST00000474962 A0A0D9SG52 128 aa8.84□□□□□ -0.99
CLIP2-204ENST00000474962 RNF222A6NCQ9 220 aa8.84□□□□□ -0.99
CLIP2-204ENST00000474962 G3V3Q6 166 aa8.84□□□□□ -0.99
CLIP2-204ENST00000474962 PFDN1O60925 122 aa8.84□□□□□ -0.99
CLIP2-204ENST00000474962 PLP1P60201 277 aa8.84□□□□□ -0.99
CLIP2-204ENST00000474962 OPCMLQ14982 345 aa8.84□□□□□ -0.99
CLIP2-204ENST00000474962 C10orf113Q5VZT2 155 aa8.84□□□□□ -0.99
CLIP2-204ENST00000474962 TMEM61Q8N0U2 210 aa8.84□□□□□ -0.99
CLIP2-204ENST00000474962 PARD6GQ9BYG4 376 aaPredicted RBP8.84□□□□□ -0.99
CLIP2-204ENST00000474962 ARV1Q9H2C2 271 aa8.84□□□□□ -0.99
CLIP2-204ENST00000474962 WFDC1Q9HC57 220 aa8.84□□□□□ -0.99
CLIP2-204ENST00000474962 DNAJC4Q9NNZ3 241 aa8.84□□□□□ -0.99
CLIP2-204ENST00000474962 KANTRA0A1W2PQU2 76 aa8.83□□□□□ -1
CLIP2-204ENST00000474962 OR4C46A6NHA9 309 aa8.83□□□□□ -1
CLIP2-204ENST00000474962 TSPAN4O14817 238 aa8.83□□□□□ -1
CLIP2-204ENST00000474962 BUB3O43684 328 aa8.83□□□□□ -1
CLIP2-204ENST00000474962 JTBO76095 146 aa8.83□□□□□ -1
CLIP2-204ENST00000474962 GALR1P47211 349 aa8.83□□□□□ -1
CLIP2-204ENST00000474962 TFPI2P48307 235 aa8.83□□□□□ -1
CLIP2-204ENST00000474962 ZNF345Q14585 488 aa8.83□□□□□ -1
CLIP2-204ENST00000474962 C1orf194Q5T5A4 169 aa8.83□□□□□ -1
CLIP2-204ENST00000474962 C16orf54Q6UWD8 224 aa8.83□□□□□ -1
CLIP2-204ENST00000474962 SIGLEC15Q6ZMC9 328 aa8.83□□□□□ -1
CLIP2-204ENST00000474962 LINC00305Q7Z4B0 112 aa8.83□□□□□ -1
CLIP2-204ENST00000474962 WFDC3Q8IUB2 231 aa8.83□□□□□ -1
CLIP2-204ENST00000474962 GBGT1Q8N5D6 347 aa8.83□□□□□ -1
CLIP2-204ENST00000474962 HSD17B11Q8NBQ5 300 aa8.83□□□□□ -1
CLIP2-204ENST00000474962 STXBP6Q8NFX7 210 aa8.83□□□□□ -1
CLIP2-204ENST00000474962 HYLS1Q96M11 299 aa8.83□□□□□ -1
CLIP2-204ENST00000474962 GPR82Q96P67 336 aa8.83□□□□□ -1
CLIP2-204ENST00000474962 SPAG8Q99932 426 aaPredicted RBP8.83□□□□□ -1
CLIP2-204ENST00000474962 RSG1Q9BU20 258 aa8.83□□□□□ -1
CLIP2-204ENST00000474962 SLC25A39Q9BZJ4 359 aaPredicted RBP8.83□□□□□ -1
CLIP2-204ENST00000474962 U3KQE9 123 aa8.83□□□□□ -1
CLIP2-204ENST00000474962 LCE6AA0A183 80 aa8.82□□□□□ -1
CLIP2-204ENST00000474962 ZNF98A6NK75 572 aa8.82□□□□□ -1
CLIP2-204ENST00000474962 C1QBP02746 253 aa8.82□□□□□ -1
CLIP2-204ENST00000474962 ZFP69Q49AA0 526 aa8.82□□□□□ -1
CLIP2-204ENST00000474962 FFAR4Q5NUL3 377 aa8.82□□□□□ -1
CLIP2-204ENST00000474962 KCNRGQ8N5I3 272 aa8.82□□□□□ -1
CLIP2-204ENST00000474962 OR11H4Q8NGC9 324 aa8.82□□□□□ -1
CLIP2-204ENST00000474962 GATAD1Q8WUU5 269 aa8.82□□□□□ -1
CLIP2-204ENST00000474962 UHRF2Q96PU4 802 aa8.82□□□□□ -1
CLIP2-204ENST00000474962 ARPC5LQ9BPX5 153 aa8.82□□□□□ -1
CLIP2-204ENST00000474962 EPPK1P58107 5090 aaKnown RBP8.82□□□□□ -1
CLIP2-204ENST00000474962 PLECQ15149 4684 aaKnown RBP8.81□□□□□ -1
CLIP2-204ENST00000474962 RPL7P18124 248 aaKnown RBP8.81□□□□□ -1
CLIP2-204ENST00000474962 C4BPBP20851 252 aa8.81□□□□□ -1
CLIP2-204ENST00000474962 CMC4P56277 68 aaPredicted RBP8.81□□□□□ -1
CLIP2-204ENST00000474962 EIF5AP63241 154 aaKnown RBP8.81□□□□□ -1
CLIP2-204ENST00000474962 RPL7L1Q6DKI1 246 aaKnown RBP8.81□□□□□ -1
CLIP2-204ENST00000474962 GNPNAT1Q96EK6 184 aaPredicted RBP8.81□□□□□ -1
CLIP2-204ENST00000474962 SHANK2-AS3Q9BTD1 123 aa8.81□□□□□ -1
CLIP2-204ENST00000474962 TIMM9Q9Y5J7 89 aa8.81□□□□□ -1
CLIP2-204ENST00000474962 H3BRN7 92 aa8.8□□□□□ -1
CLIP2-204ENST00000474962 ATF4P18848 351 aaPredicted RBP8.8□□□□□ -1
CLIP2-204ENST00000474962 ACOT6Q3I5F7 207 aaPredicted RBP8.8□□□□□ -1
CLIP2-204ENST00000474962 FAM78BQ5VT40 261 aa8.8□□□□□ -1
CLIP2-204ENST00000474962 FAM90A2PQ658T7 463 aa8.8□□□□□ -1
CLIP2-204ENST00000474962 LEMD1Q68G75 181 aa8.8□□□□□ -1
CLIP2-204ENST00000474962 PATE2Q6UY27 113 aa8.8□□□□□ -1
CLIP2-204ENST00000474962 TMUB2Q71RG4 321 aa8.8□□□□□ -1
CLIP2-204ENST00000474962 BPIFA4PQ86YQ2 179 aa8.8□□□□□ -1
CLIP2-204ENST00000474962 LRRC20Q8TCA0 184 aa8.8□□□□□ -1
CLIP2-204ENST00000474962 GLMPQ8WWB7 406 aa8.8□□□□□ -1
CLIP2-204ENST00000474962 TMEM37Q8WXS4 190 aa8.8□□□□□ -1
CLIP2-204ENST00000474962 SCRT1Q9BWW7 348 aa8.8□□□□□ -1
CLIP2-204ENST00000474962 ZNF471Q9BX82 626 aaPredicted RBP8.8□□□□□ -1
CLIP2-204ENST00000474962 MS4A6AQ9H2W1 248 aa8.8□□□□□ -1
CLIP2-204ENST00000474962 A0A1W2PPV4 95 aa8.79□□□□□ -1
CLIP2-204ENST00000474962 BCL2L11O43521 198 aa8.79□□□□□ -1
CLIP2-204ENST00000474962 MBP02144 154 aa8.79□□□□□ -1
CLIP2-204ENST00000474962 CXCL2P19875 107 aa8.79□□□□□ -1
CLIP2-204ENST00000474962 ATP6V0CP27449 155 aa8.79□□□□□ -1
CLIP2-204ENST00000474962 ID1P41134 155 aa8.79□□□□□ -1
CLIP2-204ENST00000474962 SERF2P84101 59 aa8.79□□□□□ -1
CLIP2-204ENST00000474962 PSMG3Q9BT73 122 aaPredicted RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms