RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 VSIRQ9H7M9 311 aa13.83□□□□□ -0.2
CCDC171-206ENST00000474193 DOK5Q9P104 306 aa13.83□□□□□ -0.2
CCDC171-206ENST00000474193 RNF24Q9Y225 148 aa13.83□□□□□ -0.2
CCDC171-206ENST00000474193 HIGD1AQ9Y241 93 aa13.83□□□□□ -0.2
CCDC171-206ENST00000474193 B2MP61769 119 aa13.82□□□□□ -0.2
CCDC171-206ENST00000474193 MIC13Q5XKP0 118 aa13.82□□□□□ -0.2
CCDC171-206ENST00000474193 FAM90A2PQ658T7 463 aa13.82□□□□□ -0.2
CCDC171-206ENST00000474193 OR1L4Q8NGR5 311 aa13.82□□□□□ -0.2
CCDC171-206ENST00000474193 PARD6GQ9BYG4 376 aaPredicted RBP13.82□□□□□ -0.2
CCDC171-206ENST00000474193 WFDC1Q9HC57 220 aa13.82□□□□□ -0.2
CCDC171-206ENST00000474193 TP53TG1Q9Y2A0 90 aa13.82□□□□□ -0.2
CCDC171-206ENST00000474193 PXMP4Q9Y6I8 212 aa13.82□□□□□ -0.2
CCDC171-206ENST00000474193 ELOA3CA0A087WX78 387 aaPredicted RBP13.81□□□□□ -0.2
CCDC171-206ENST00000474193 TRAV2A0A0B4J234 112 aa13.81□□□□□ -0.2
CCDC171-206ENST00000474193 A0A0D9SG52 128 aa13.81□□□□□ -0.2
CCDC171-206ENST00000474193 SPRY2O43597 315 aa13.81□□□□□ -0.2
CCDC171-206ENST00000474193 APOHP02749 345 aaPredicted RBP13.81□□□□□ -0.2
CCDC171-206ENST00000474193 RPL35AP18077 110 aaKnown RBP13.81□□□□□ -0.2
CCDC171-206ENST00000474193 PLP1P60201 277 aa13.81□□□□□ -0.2
CCDC171-206ENST00000474193 PFDN5Q99471 154 aa13.81□□□□□ -0.2
CCDC171-206ENST00000474193 OVOL2Q9BRP0 275 aa13.81□□□□□ -0.2
CCDC171-206ENST00000474193 SLC39A9Q9NUM3 307 aa13.81□□□□□ -0.2
CCDC171-206ENST00000474193 HELTA6NFD8 242 aa13.8□□□□□ -0.2
CCDC171-206ENST00000474193 C1QBP02746 253 aa13.8□□□□□ -0.2
CCDC171-206ENST00000474193 PRR20EP86478 221 aa13.8□□□□□ -0.2
CCDC171-206ENST00000474193 PRR20CP86479 221 aa13.8□□□□□ -0.2
CCDC171-206ENST00000474193 PRR20DP86480 221 aa13.8□□□□□ -0.2
CCDC171-206ENST00000474193 PRR20BP86481 221 aa13.8□□□□□ -0.2
CCDC171-206ENST00000474193 PRR20AP86496 221 aa13.8□□□□□ -0.2
CCDC171-206ENST00000474193 ZNF345Q14585 488 aa13.8□□□□□ -0.2
CCDC171-206ENST00000474193 APRG1Q8IVJ8 170 aa13.8□□□□□ -0.2
CCDC171-206ENST00000474193 OR11H4Q8NGC9 324 aa13.8□□□□□ -0.2
CCDC171-206ENST00000474193 HYLS1Q96M11 299 aa13.8□□□□□ -0.2
CCDC171-206ENST00000474193 MS4A6AQ9H2W1 248 aa13.8□□□□□ -0.2
CCDC171-206ENST00000474193 DNAJC4Q9NNZ3 241 aa13.8□□□□□ -0.2
CCDC171-206ENST00000474193 U3KQE9 123 aa13.8□□□□□ -0.2
CCDC171-206ENST00000474193 BUB3O43684 328 aa13.79□□□□□ -0.2
CCDC171-206ENST00000474193 C1orf194Q5T5A4 169 aa13.79□□□□□ -0.2
CCDC171-206ENST00000474193 C10orf113Q5VZT2 155 aa13.79□□□□□ -0.2
CCDC171-206ENST00000474193 C16orf54Q6UWD8 224 aa13.79□□□□□ -0.2
CCDC171-206ENST00000474193 OR8I2Q8N0Y5 310 aa13.79□□□□□ -0.2
CCDC171-206ENST00000474193 ARPC5LQ9BPX5 153 aa13.79□□□□□ -0.2
CCDC171-206ENST00000474193 ARV1Q9H2C2 271 aa13.79□□□□□ -0.2
CCDC171-206ENST00000474193 MAP6D1Q9H9H5 199 aa13.79□□□□□ -0.2
CCDC171-206ENST00000474193 KANTRA0A1W2PQU2 76 aa13.78□□□□□ -0.2
CCDC171-206ENST00000474193 PFDN1O60925 122 aa13.78□□□□□ -0.2
CCDC171-206ENST00000474193 JTBO76095 146 aa13.78□□□□□ -0.2
CCDC171-206ENST00000474193 DEFB135Q30KP9 77 aa13.78□□□□□ -0.2
CCDC171-206ENST00000474193 KCNRGQ8N5I3 272 aa13.78□□□□□ -0.2
CCDC171-206ENST00000474193 STXBP6Q8NFX7 210 aa13.78□□□□□ -0.2
CCDC171-206ENST00000474193 RSG1Q9BU20 258 aa13.78□□□□□ -0.2
CCDC171-206ENST00000474193 SLC25A39Q9BZJ4 359 aaPredicted RBP13.78□□□□□ -0.2
CCDC171-206ENST00000474193 CSTL1Q9H114 145 aa13.78□□□□□ -0.2
CCDC171-206ENST00000474193 SLC25A22Q9H936 323 aa13.78□□□□□ -0.2
CCDC171-206ENST00000474193 ZNF98A6NK75 572 aa13.77□□□□□ -0.21
CCDC171-206ENST00000474193 ZFP69Q49AA0 526 aa13.77□□□□□ -0.21
CCDC171-206ENST00000474193 SIGLEC15Q6ZMC9 328 aa13.77□□□□□ -0.21
CCDC171-206ENST00000474193 LINC00305Q7Z4B0 112 aa13.77□□□□□ -0.21
CCDC171-206ENST00000474193 HSD17B11Q8NBQ5 300 aa13.77□□□□□ -0.21
CCDC171-206ENST00000474193 GATAD1Q8WUU5 269 aa13.77□□□□□ -0.21
CCDC171-206ENST00000474193 GNPNAT1Q96EK6 184 aaPredicted RBP13.77□□□□□ -0.21
CCDC171-206ENST00000474193 GPR82Q96P67 336 aa13.77□□□□□ -0.21
CCDC171-206ENST00000474193 SHANK2-AS3Q9BTD1 123 aa13.77□□□□□ -0.21
CCDC171-206ENST00000474193 TIMM9Q9Y5J7 89 aa13.77□□□□□ -0.21
CCDC171-206ENST00000474193 GALR1P47211 349 aa13.76□□□□□ -0.21
CCDC171-206ENST00000474193 DEFB131AP59861 70 aa13.76□□□□□ -0.21
CCDC171-206ENST00000474193 FFAR4Q5NUL3 377 aa13.76□□□□□ -0.21
CCDC171-206ENST00000474193 RPL7L1Q6DKI1 246 aaKnown RBP13.76□□□□□ -0.21
CCDC171-206ENST00000474193 GLMPQ8WWB7 406 aa13.76□□□□□ -0.21
CCDC171-206ENST00000474193 RNF183Q96D59 192 aa13.76□□□□□ -0.21
CCDC171-206ENST00000474193 UHRF2Q96PU4 802 aa13.76□□□□□ -0.21
CCDC171-206ENST00000474193 H3BRN7 92 aa13.75□□□□□ -0.21
CCDC171-206ENST00000474193 C4BPBP20851 252 aa13.75□□□□□ -0.21
CCDC171-206ENST00000474193 PATE2Q6UY27 113 aa13.75□□□□□ -0.21
CCDC171-206ENST00000474193 TMUB2Q71RG4 321 aa13.75□□□□□ -0.21
CCDC171-206ENST00000474193 STHQ8IWL8 128 aa13.75□□□□□ -0.21
CCDC171-206ENST00000474193 TMEM37Q8WXS4 190 aa13.75□□□□□ -0.21
CCDC171-206ENST00000474193 BCL2L11O43521 198 aa13.74□□□□□ -0.21
CCDC171-206ENST00000474193 RPL7P18124 248 aaKnown RBP13.74□□□□□ -0.21
CCDC171-206ENST00000474193 CXCL2P19875 107 aa13.74□□□□□ -0.21
CCDC171-206ENST00000474193 EIF5AP63241 154 aaKnown RBP13.74□□□□□ -0.21
CCDC171-206ENST00000474193 ACOT6Q3I5F7 207 aaPredicted RBP13.74□□□□□ -0.21
CCDC171-206ENST00000474193 PSMG3Q9BT73 122 aaPredicted RBP13.74□□□□□ -0.21
CCDC171-206ENST00000474193 SCRT1Q9BWW7 348 aa13.74□□□□□ -0.21
CCDC171-206ENST00000474193 ATP6V0CP27449 155 aa13.73□□□□□ -0.21
CCDC171-206ENST00000474193 ZNF124Q15973 351 aa13.73□□□□□ -0.21
CCDC171-206ENST00000474193 LEMD1Q68G75 181 aa13.73□□□□□ -0.21
CCDC171-206ENST00000474193 ZNF471Q9BX82 626 aaPredicted RBP13.73□□□□□ -0.21
CCDC171-206ENST00000474193 K7EQG2 157 aa13.72□□□□□ -0.21
CCDC171-206ENST00000474193 MBP02144 154 aa13.72□□□□□ -0.21
CCDC171-206ENST00000474193 ATF4P18848 351 aaPredicted RBP13.72□□□□□ -0.21
CCDC171-206ENST00000474193 SERF2P84101 59 aa13.72□□□□□ -0.21
CCDC171-206ENST00000474193 CD300CQ08708 224 aa13.72□□□□□ -0.21
CCDC171-206ENST00000474193 FAM78BQ5VT40 261 aa13.72□□□□□ -0.21
CCDC171-206ENST00000474193 BPIFA4PQ86YQ2 179 aa13.72□□□□□ -0.21
CCDC171-206ENST00000474193 SLC25A32Q9H2D1 315 aa13.72□□□□□ -0.21
CCDC171-206ENST00000474193 NRN1Q9NPD7 142 aa13.72□□□□□ -0.21
CCDC171-206ENST00000474193 KMT2CQ8NEZ4 4911 aaKnown RBP13.72□□□□□ -0.21
CCDC171-206ENST00000474193 A0A0J9YWU9 116 aa13.71□□□□□ -0.21
CCDC171-206ENST00000474193 LCE6AA0A183 80 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms