RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 HIGD1AQ9Y241 93 aa12.99□□□□□ -0.33
UPF3A-203ENST00000474056 KLK5Q9Y337 293 aaPredicted RBP12.99□□□□□ -0.33
UPF3A-203ENST00000474056 F6UB75 175 aa12.98□□□□□ -0.33
UPF3A-203ENST00000474056 UPK1BO75841 260 aa12.98□□□□□ -0.33
UPF3A-203ENST00000474056 FXYD7P58549 80 aa12.98□□□□□ -0.33
UPF3A-203ENST00000474056 RAP2BP61225 183 aa12.98□□□□□ -0.33
UPF3A-203ENST00000474056 IFITM3Q01628 133 aa12.98□□□□□ -0.33
UPF3A-203ENST00000474056 GPR82Q96P67 336 aa12.98□□□□□ -0.33
UPF3A-203ENST00000474056 UHRF2Q96PU4 802 aa12.98□□□□□ -0.33
UPF3A-203ENST00000474056 C1QTNF4Q9BXJ3 329 aa12.98□□□□□ -0.33
UPF3A-203ENST00000474056 MFFQ9GZY8 342 aa12.98□□□□□ -0.33
UPF3A-203ENST00000474056 ELOA3CA0A087WX78 387 aaPredicted RBP12.97□□□□□ -0.33
UPF3A-203ENST00000474056 HYPMO75409 117 aa12.97□□□□□ -0.33
UPF3A-203ENST00000474056 OR5G3P0C626 314 aa12.97□□□□□ -0.33
UPF3A-203ENST00000474056 S100A7P31151 101 aa12.97□□□□□ -0.33
UPF3A-203ENST00000474056 BCAP31P51572 246 aa12.97□□□□□ -0.33
UPF3A-203ENST00000474056 SAMD13Q5VXD3 122 aa12.97□□□□□ -0.33
UPF3A-203ENST00000474056 PATE2Q6UY27 113 aa12.97□□□□□ -0.33
UPF3A-203ENST00000474056 OR4B1Q8NGF8 309 aa12.97□□□□□ -0.33
UPF3A-203ENST00000474056 ENKURQ8TC29 256 aa12.97□□□□□ -0.33
UPF3A-203ENST00000474056 GGACTQ9BVM4 153 aa12.97□□□□□ -0.33
UPF3A-203ENST00000474056 KMT2AQ03164 3969 aa12.96□□□□□ -0.33
UPF3A-203ENST00000474056 FAM24AA6NFZ4 105 aa12.96□□□□□ -0.33
UPF3A-203ENST00000474056 AGPAT2O15120 278 aa12.96□□□□□ -0.33
UPF3A-203ENST00000474056 DEDDO75618 318 aa12.96□□□□□ -0.33
UPF3A-203ENST00000474056 CAV2P51636 162 aa12.96□□□□□ -0.33
UPF3A-203ENST00000474056 S100A10P60903 97 aa12.96□□□□□ -0.33
UPF3A-203ENST00000474056 IL15RAQ13261 267 aa12.96□□□□□ -0.33
UPF3A-203ENST00000474056 RAB32Q13637 225 aa12.96□□□□□ -0.33
UPF3A-203ENST00000474056 IGFL4Q6B9Z1 124 aa12.96□□□□□ -0.33
UPF3A-203ENST00000474056 ZNF709Q8N972 641 aa12.96□□□□□ -0.33
UPF3A-203ENST00000474056 ARL6Q9H0F7 186 aa12.96□□□□□ -0.33
UPF3A-203ENST00000474056 RPRMQ9NS64 109 aa12.96□□□□□ -0.33
UPF3A-203ENST00000474056 TRAV8-2A0A0B4J237 113 aa12.95□□□□□ -0.34
UPF3A-203ENST00000474056 A0A0J9YX75 114 aa12.95□□□□□ -0.34
UPF3A-203ENST00000474056 CST7O76096 145 aa12.95□□□□□ -0.34
UPF3A-203ENST00000474056 LY6G6CO95867 125 aa12.95□□□□□ -0.34
UPF3A-203ENST00000474056 FGL1Q08830 312 aa12.95□□□□□ -0.34
UPF3A-203ENST00000474056 FAM78BQ5VT40 261 aa12.95□□□□□ -0.34
UPF3A-203ENST00000474056 EBLN2Q6P2I7 272 aa12.95□□□□□ -0.34
UPF3A-203ENST00000474056 CLUHP3Q96NS8 147 aa12.95□□□□□ -0.34
UPF3A-203ENST00000474056 MGST2Q99735 147 aa12.95□□□□□ -0.34
UPF3A-203ENST00000474056 SLC35B3Q9H1N7 401 aa12.95□□□□□ -0.34
UPF3A-203ENST00000474056 ARV1Q9H2C2 271 aa12.95□□□□□ -0.34
UPF3A-203ENST00000474056 RPL7P18124 248 aaKnown RBP12.94□□□□□ -0.34
UPF3A-203ENST00000474056 SPATA31B1PQ5VZV4 182 aa12.94□□□□□ -0.34
UPF3A-203ENST00000474056 ZNF546Q86UE3 836 aa12.94□□□□□ -0.34
UPF3A-203ENST00000474056 RNF182Q8N6D2 247 aa12.94□□□□□ -0.34
UPF3A-203ENST00000474056 HRH4Q9H3N8 390 aa12.94□□□□□ -0.34
UPF3A-203ENST00000474056 CELA1Q9UNI1 258 aa12.94□□□□□ -0.34
UPF3A-203ENST00000474056 IGSF23A1L1A6 192 aa12.93□□□□□ -0.34
UPF3A-203ENST00000474056 GOSR2O14653 212 aa12.93□□□□□ -0.34
UPF3A-203ENST00000474056 PVALBP20472 110 aaPredicted RBP12.93□□□□□ -0.34
UPF3A-203ENST00000474056 PSG9Q00887 426 aa12.93□□□□□ -0.34
UPF3A-203ENST00000474056 ZNF705AQ6ZN79 300 aaPredicted RBP12.93□□□□□ -0.34
UPF3A-203ENST00000474056 NRARPQ7Z6K4 114 aa12.93□□□□□ -0.34
UPF3A-203ENST00000474056 LYRM2Q9NU23 88 aaPredicted RBP12.93□□□□□ -0.34
UPF3A-203ENST00000474056 A0A087X0K7 114 aa12.92□□□□□ -0.34
UPF3A-203ENST00000474056 MRPS12O15235 138 aaKnown RBP12.92□□□□□ -0.34
UPF3A-203ENST00000474056 SIX6O95475 246 aa12.92□□□□□ -0.34
UPF3A-203ENST00000474056 HLA-DMBP28068 263 aa12.92□□□□□ -0.34
UPF3A-203ENST00000474056 PXDC1Q5TGL8 231 aa12.92□□□□□ -0.34
UPF3A-203ENST00000474056 GPN1Q9HCN4 374 aaPredicted RBP12.92□□□□□ -0.34
UPF3A-203ENST00000474056 IGHV3OR16-12A0A075B7B8 117 aa12.91□□□□□ -0.34
UPF3A-203ENST00000474056 A8MTW9 85 aa12.91□□□□□ -0.34
UPF3A-203ENST00000474056 ZNF705FA8MVS1 300 aaPredicted RBP12.91□□□□□ -0.34
UPF3A-203ENST00000474056 ZNF705DP0CH99 300 aaPredicted RBP12.91□□□□□ -0.34
UPF3A-203ENST00000474056 ZNF705BP0CI00 300 aaPredicted RBP12.91□□□□□ -0.34
UPF3A-203ENST00000474056 SULT1A1P50225 295 aa12.91□□□□□ -0.34
UPF3A-203ENST00000474056 Q6ZTC4 211 aa12.91□□□□□ -0.34
UPF3A-203ENST00000474056 LINC00305Q7Z4B0 112 aa12.91□□□□□ -0.34
UPF3A-203ENST00000474056 S100A7AQ86SG5 101 aa12.91□□□□□ -0.34
UPF3A-203ENST00000474056 TMEM252Q8N6L7 170 aa12.91□□□□□ -0.34
UPF3A-203ENST00000474056 TMEM37Q8WXS4 190 aa12.91□□□□□ -0.34
UPF3A-203ENST00000474056 NEU1Q99519 415 aa12.91□□□□□ -0.34
UPF3A-203ENST00000474056 UQCC1Q9NVA1 299 aa12.91□□□□□ -0.34
UPF3A-203ENST00000474056 BIRC6Q9NR09 4857 aa12.9□□□□□ -0.34
UPF3A-203ENST00000474056 INMT-MINDY4F8WBC2 141 aa12.9□□□□□ -0.34
UPF3A-203ENST00000474056 CAMLGP49069 296 aa12.9□□□□□ -0.34
UPF3A-203ENST00000474056 VWC2Q2TAL6 325 aa12.9□□□□□ -0.34
UPF3A-203ENST00000474056 MORN5Q5VZ52 161 aa12.9□□□□□ -0.34
UPF3A-203ENST00000474056 MIC13Q5XKP0 118 aa12.9□□□□□ -0.34
UPF3A-203ENST00000474056 AMTNQ6UX39 209 aa12.9□□□□□ -0.34
UPF3A-203ENST00000474056 C2CD4CQ8TF44 421 aa12.9□□□□□ -0.34
UPF3A-203ENST00000474056 WDR83OSQ9Y284 106 aa12.9□□□□□ -0.34
UPF3A-203ENST00000474056 UBE2L5PA0A1B0GUS4 154 aa12.89□□□□□ -0.35
UPF3A-203ENST00000474056 C11orf94C9JXX5 98 aa12.89□□□□□ -0.35
UPF3A-203ENST00000474056 COX7A2P2O60397 106 aa12.89□□□□□ -0.35
UPF3A-203ENST00000474056 PRB4P10163 310 aaPredicted RBP12.89□□□□□ -0.35
UPF3A-203ENST00000474056 CXCL3P19876 107 aa12.89□□□□□ -0.35
UPF3A-203ENST00000474056 CNN1P51911 297 aaKnown RBP12.89□□□□□ -0.35
UPF3A-203ENST00000474056 ZNF767PQ75MW2 155 aa12.89□□□□□ -0.35
UPF3A-203ENST00000474056 STX12Q86Y82 276 aa12.89□□□□□ -0.35
UPF3A-203ENST00000474056 C1orf158Q8N1D5 194 aa12.89□□□□□ -0.35
UPF3A-203ENST00000474056 ZNF738Q8NE65 137 aa12.89□□□□□ -0.35
UPF3A-203ENST00000474056 PRAF2O60831 178 aa12.88□□□□□ -0.35
UPF3A-203ENST00000474056 SNRPCP09234 159 aaKnown RBP12.88□□□□□ -0.35
UPF3A-203ENST00000474056 S100A11P31949 105 aa12.88□□□□□ -0.35
UPF3A-203ENST00000474056 PRR20EP86478 221 aa12.88□□□□□ -0.35
UPF3A-203ENST00000474056 PRR20CP86479 221 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms