RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 MCM3APO60318 1980 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 PLXNB2O15031 1838 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 DOCK4Q8N1I0 1966 aa2.6□□□□□ -1.99
BRCA1-212ENST00000473961 CHD3Q12873 2000 aaKnown RBP2.6□□□□□ -1.99
BRCA1-212ENST00000473961 IGLV3-12A0A075B6K2 115 aa2.6□□□□□ -1.99
BRCA1-212ENST00000473961 TRAV9-1A0A075B6T8 112 aa2.6□□□□□ -1.99
BRCA1-212ENST00000473961 LOC389332A0A1B0GUA5 103 aa2.6□□□□□ -1.99
BRCA1-212ENST00000473961 MYBPHLA2RUH7 354 aa2.6□□□□□ -1.99
BRCA1-212ENST00000473961 TAX1BP3O14907 124 aa2.6□□□□□ -1.99
BRCA1-212ENST00000473961 GNG7O60262 68 aa2.6□□□□□ -1.99
BRCA1-212ENST00000473961 PITX3O75364 302 aa2.6□□□□□ -1.99
BRCA1-212ENST00000473961 MPZL1O95297 269 aa2.6□□□□□ -1.99
BRCA1-212ENST00000473961 CDS2O95674 445 aa2.6□□□□□ -1.99
BRCA1-212ENST00000473961 GPX1P07203 203 aa2.6□□□□□ -1.99
BRCA1-212ENST00000473961 CECR9P0C854 216 aa2.6□□□□□ -1.99
BRCA1-212ENST00000473961 IGLC1P0CG04 106 aa2.6□□□□□ -1.99
BRCA1-212ENST00000473961 SCGB1C2P0DMR2 95 aa2.6□□□□□ -1.99
BRCA1-212ENST00000473961 BCL2P10415 239 aa2.6□□□□□ -1.99
BRCA1-212ENST00000473961 S100GP29377 79 aa2.6□□□□□ -1.99
BRCA1-212ENST00000473961 GUCA1AP43080 201 aaPredicted RBP2.6□□□□□ -1.99
BRCA1-212ENST00000473961 TAS2R30P59541 319 aa2.6□□□□□ -1.99
BRCA1-212ENST00000473961 YPEL3P61236 119 aaPredicted RBP2.6□□□□□ -1.99
BRCA1-212ENST00000473961 RHOAP61586 193 aa2.6□□□□□ -1.99
BRCA1-212ENST00000473961 TBPL1P62380 186 aa2.6□□□□□ -1.99
BRCA1-212ENST00000473961 SUPT4H1P63272 117 aaKnown RBP2.6□□□□□ -1.99
BRCA1-212ENST00000473961 CCL7P80098 99 aa2.6□□□□□ -1.99
BRCA1-212ENST00000473961 EIF4EBP1Q13541 118 aaPredicted RBP2.6□□□□□ -1.99
BRCA1-212ENST00000473961 LUZP6Q538Z0 58 aa2.6□□□□□ -1.99
BRCA1-212ENST00000473961 AMMECR1LQ6DCA0 310 aa2.6□□□□□ -1.99
BRCA1-212ENST00000473961 MRPL54Q6P161 138 aaKnown RBP2.6□□□□□ -1.99
BRCA1-212ENST00000473961 AGTRAPQ6RW13 159 aa2.6□□□□□ -1.99
BRCA1-212ENST00000473961 NEGR1Q7Z3B1 354 aa2.6□□□□□ -1.99
BRCA1-212ENST00000473961 LHFPL1Q86WI0 220 aa2.6□□□□□ -1.99
BRCA1-212ENST00000473961 DEFB125Q8N687 156 aa2.6□□□□□ -1.99
BRCA1-212ENST00000473961 ZNF676Q8N7Q3 588 aa2.6□□□□□ -1.99
BRCA1-212ENST00000473961 ZIC4Q8N9L1 334 aa2.6□□□□□ -1.99
BRCA1-212ENST00000473961 SPANXA2-OT1Q8N9U9 137 aa2.6□□□□□ -1.99
BRCA1-212ENST00000473961 SCGB1C1Q8TD33 95 aa2.6□□□□□ -1.99
BRCA1-212ENST00000473961 MBD3L1Q8WWY6 194 aa2.6□□□□□ -1.99
BRCA1-212ENST00000473961 MRAP2Q96G30 205 aa2.6□□□□□ -1.99
BRCA1-212ENST00000473961 ABHD14BQ96IU4 210 aa2.6□□□□□ -1.99
BRCA1-212ENST00000473961 PRSS27Q9BQR3 290 aa2.6□□□□□ -1.99
BRCA1-212ENST00000473961 RTBDNQ9BSG5 229 aaPredicted RBP2.6□□□□□ -1.99
BRCA1-212ENST00000473961 PSMG3Q9BT73 122 aaPredicted RBP2.6□□□□□ -1.99
BRCA1-212ENST00000473961 SPANXA1Q9NS26 97 aa2.6□□□□□ -1.99
BRCA1-212ENST00000473961 PLEKHJ1Q9NW61 149 aa2.6□□□□□ -1.99
BRCA1-212ENST00000473961 ANAPC10Q9UM13 185 aa2.6□□□□□ -1.99
BRCA1-212ENST00000473961 TBL2Q9Y4P3 447 aaKnown RBP2.6□□□□□ -1.99
BRCA1-212ENST00000473961 LSM5Q9Y4Y9 91 aaKnown RBP2.6□□□□□ -1.99
BRCA1-212ENST00000473961 ADAMTSL1Q8N6G6 1762 aa2.59□□□□□ -1.99
BRCA1-212ENST00000473961 DOCK9Q9BZ29 2069 aa2.59□□□□□ -1.99
BRCA1-212ENST00000473961 PLXNA4Q9HCM2 1894 aa2.59□□□□□ -1.99
BRCA1-212ENST00000473961 A0A0G2JMM0 328 aa2.59□□□□□ -1.99
BRCA1-212ENST00000473961 A0A1B0GV50 99 aa2.59□□□□□ -1.99
BRCA1-212ENST00000473961 A0A1W2PPB8 328 aa2.59□□□□□ -1.99
BRCA1-212ENST00000473961 TMEM189A5PLL7 270 aa2.59□□□□□ -1.99
BRCA1-212ENST00000473961 DPRXA6NFQ7 191 aa2.59□□□□□ -1.99
BRCA1-212ENST00000473961 KIR3DP1A8MWS1 328 aa2.59□□□□□ -1.99
BRCA1-212ENST00000473961 C17orf112F2Z3M2 114 aa2.59□□□□□ -1.99
BRCA1-212ENST00000473961 TMEM250H0YL14 139 aa2.59□□□□□ -1.99
BRCA1-212ENST00000473961 J3QR89 54 aa2.59□□□□□ -1.99
BRCA1-212ENST00000473961 NUPR1O60356 82 aa2.59□□□□□ -1.99
BRCA1-212ENST00000473961 COX7A2P2O60397 106 aa2.59□□□□□ -1.99
BRCA1-212ENST00000473961 DHRS3O75911 302 aa2.59□□□□□ -1.99
BRCA1-212ENST00000473961 NDUFB2O95178 105 aa2.59□□□□□ -1.99
BRCA1-212ENST00000473961 HAND1O96004 215 aa2.59□□□□□ -1.99
BRCA1-212ENST00000473961 NRASP01111 189 aa2.59□□□□□ -1.99
BRCA1-212ENST00000473961 KRASP01116 189 aa2.59□□□□□ -1.99
BRCA1-212ENST00000473961 IGKV1D-16P01601 117 aa2.59□□□□□ -1.99
BRCA1-212ENST00000473961 GYPBP06028 91 aa2.59□□□□□ -1.99
BRCA1-212ENST00000473961 ATP6V0CP27449 155 aa2.59□□□□□ -1.99
BRCA1-212ENST00000473961 PIGPP57054 158 aa2.59□□□□□ -1.99
BRCA1-212ENST00000473961 KRTDAPP60985 99 aa2.59□□□□□ -1.99
BRCA1-212ENST00000473961 HBG1P69891 147 aa2.59□□□□□ -1.99
BRCA1-212ENST00000473961 HBG2P69892 147 aa2.59□□□□□ -1.99
BRCA1-212ENST00000473961 HSD52Q0P140 79 aa2.59□□□□□ -1.99
BRCA1-212ENST00000473961 TMEM267Q0VDI3 215 aaPredicted RBP2.59□□□□□ -1.99
BRCA1-212ENST00000473961 FUT5Q11128 374 aa2.59□□□□□ -1.99
BRCA1-212ENST00000473961 ADIRFQ15847 76 aa2.59□□□□□ -1.99
BRCA1-212ENST00000473961 CCSMST1Q4G0I0 132 aa2.59□□□□□ -1.99
BRCA1-212ENST00000473961 CLLU1OSQ5K130 101 aa2.59□□□□□ -1.99
BRCA1-212ENST00000473961 GLYATL3Q5SZD4 288 aa2.59□□□□□ -1.99
BRCA1-212ENST00000473961 FKBP1CQ5VVH2 108 aa2.59□□□□□ -1.99
BRCA1-212ENST00000473961 ZNF550Q7Z398 422 aa2.59□□□□□ -1.99
BRCA1-212ENST00000473961 C5orf17Q8NAS9 161 aa2.59□□□□□ -1.99
BRCA1-212ENST00000473961 ZFP62Q8NB50 900 aaPredicted RBP2.59□□□□□ -1.99
BRCA1-212ENST00000473961 OR10P1Q8NGE3 313 aa2.59□□□□□ -1.99
BRCA1-212ENST00000473961 OR5A1Q8NGJ0 315 aa2.59□□□□□ -1.99
BRCA1-212ENST00000473961 SLC25A40Q8TBP6 338 aa2.59□□□□□ -1.99
BRCA1-212ENST00000473961 Q96M85 177 aa2.59□□□□□ -1.99
BRCA1-212ENST00000473961 SMIM7Q9BQ49 75 aa2.59□□□□□ -1.99
BRCA1-212ENST00000473961 SH3BGRL3Q9H299 93 aa2.59□□□□□ -1.99
BRCA1-212ENST00000473961 GNG13Q9P2W3 67 aa2.59□□□□□ -1.99
BRCA1-212ENST00000473961 TAC3Q9UHF0 121 aa2.59□□□□□ -1.99
BRCA1-212ENST00000473961 CASP8AP2Q9UKL3 1982 aa2.59□□□□□ -2
BRCA1-212ENST00000473961 KIF26AQ9ULI4 1882 aaPredicted RBP2.58□□□□□ -2
BRCA1-212ENST00000473961 MYO16Q9Y6X6 1858 aa2.58□□□□□ -2
BRCA1-212ENST00000473961 HELZP42694 1942 aaKnown RBP2.58□□□□□ -2
BRCA1-212ENST00000473961 A0A1B0GX12 115 aa2.58□□□□□ -2
BRCA1-212ENST00000473961 PGPA6NDG6 321 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms