RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 HBG1P69891 147 aa13.84□□□□□ -0.19
PTCD3-210ENST00000473829 HBG2P69892 147 aa13.84□□□□□ -0.19
PTCD3-210ENST00000473829 C20orf173Q96LM9 149 aa13.84□□□□□ -0.19
PTCD3-210ENST00000473829 LINC00052Q96N35 136 aa13.84□□□□□ -0.19
PTCD3-210ENST00000473829 ARV1Q9H2C2 271 aa13.84□□□□□ -0.19
PTCD3-210ENST00000473829 A0A0J9YWU9 116 aa13.83□□□□□ -0.2
PTCD3-210ENST00000473829 RLN2P04090 185 aa13.83□□□□□ -0.2
PTCD3-210ENST00000473829 PRR20EP86478 221 aa13.83□□□□□ -0.2
PTCD3-210ENST00000473829 PRR20CP86479 221 aa13.83□□□□□ -0.2
PTCD3-210ENST00000473829 PRR20DP86480 221 aa13.83□□□□□ -0.2
PTCD3-210ENST00000473829 PRR20BP86481 221 aa13.83□□□□□ -0.2
PTCD3-210ENST00000473829 PRR20AP86496 221 aa13.83□□□□□ -0.2
PTCD3-210ENST00000473829 BAXQ07812 192 aa13.83□□□□□ -0.2
PTCD3-210ENST00000473829 MORN5Q5VZ52 161 aa13.83□□□□□ -0.2
PTCD3-210ENST00000473829 MIC13Q5XKP0 118 aa13.83□□□□□ -0.2
PTCD3-210ENST00000473829 TMEM37Q8WXS4 190 aa13.83□□□□□ -0.2
PTCD3-210ENST00000473829 GPR82Q96P67 336 aa13.83□□□□□ -0.2
PTCD3-210ENST00000473829 RNF126Q9BV68 326 aa13.83□□□□□ -0.2
PTCD3-210ENST00000473829 H3BMM0 161 aa13.82□□□□□ -0.2
PTCD3-210ENST00000473829 ISLRO14498 428 aa13.82□□□□□ -0.2
PTCD3-210ENST00000473829 MPC2O95563 127 aa13.82□□□□□ -0.2
PTCD3-210ENST00000473829 SPP1P10451 314 aa13.82□□□□□ -0.2
PTCD3-210ENST00000473829 HLA-DRB4P13762 266 aa13.82□□□□□ -0.2
PTCD3-210ENST00000473829 CXCL3P19876 107 aa13.82□□□□□ -0.2
PTCD3-210ENST00000473829 ID1P41134 155 aa13.82□□□□□ -0.2
PTCD3-210ENST00000473829 PXDC1Q5TGL8 231 aa13.82□□□□□ -0.2
PTCD3-210ENST00000473829 GATAD1Q8WUU5 269 aa13.82□□□□□ -0.2
PTCD3-210ENST00000473829 HLA-DRB4X5D2U9 266 aa13.82□□□□□ -0.2
PTCD3-210ENST00000473829 TRAV8-2A0A0B4J237 113 aa13.81□□□□□ -0.2
PTCD3-210ENST00000473829 MRPS12O15235 138 aaKnown RBP13.81□□□□□ -0.2
PTCD3-210ENST00000473829 COX7A2P2O60397 106 aa13.81□□□□□ -0.2
PTCD3-210ENST00000473829 FGF7P21781 194 aa13.81□□□□□ -0.2
PTCD3-210ENST00000473829 S100A7P31151 101 aa13.81□□□□□ -0.2
PTCD3-210ENST00000473829 MEOX2P50222 304 aa13.81□□□□□ -0.2
PTCD3-210ENST00000473829 OPCMLQ14982 345 aa13.81□□□□□ -0.2
PTCD3-210ENST00000473829 ATP6V1FQ16864 119 aa13.81□□□□□ -0.2
PTCD3-210ENST00000473829 IGFL4Q6B9Z1 124 aa13.81□□□□□ -0.2
PTCD3-210ENST00000473829 MORN3Q6PF18 240 aaPredicted RBP13.81□□□□□ -0.2
PTCD3-210ENST00000473829 LINC00305Q7Z4B0 112 aa13.81□□□□□ -0.2
PTCD3-210ENST00000473829 OR5C1Q8NGR4 320 aa13.81□□□□□ -0.2
PTCD3-210ENST00000473829 C16orf92Q96LL3 132 aa13.81□□□□□ -0.2
PTCD3-210ENST00000473829 SLC25A31Q9H0C2 315 aa13.81□□□□□ -0.2
PTCD3-210ENST00000473829 SAV1Q9H4B6 383 aaPredicted RBP13.81□□□□□ -0.2
PTCD3-210ENST00000473829 RYR3Q15413 4870 aa13.81□□□□□ -0.2
PTCD3-210ENST00000473829 F6UB75 175 aa13.8□□□□□ -0.2
PTCD3-210ENST00000473829 RPL7P18124 248 aaKnown RBP13.8□□□□□ -0.2
PTCD3-210ENST00000473829 RAB31Q13636 194 aa13.8□□□□□ -0.2
PTCD3-210ENST00000473829 THAP6Q8TBB0 222 aa13.8□□□□□ -0.2
PTCD3-210ENST00000473829 CLEC5AQ9NY25 188 aa13.8□□□□□ -0.2
PTCD3-210ENST00000473829 ATF4P18848 351 aaPredicted RBP13.79□□□□□ -0.2
PTCD3-210ENST00000473829 RPL29P47914 159 aaKnown RBP13.79□□□□□ -0.2
PTCD3-210ENST00000473829 FGL1Q08830 312 aa13.79□□□□□ -0.2
PTCD3-210ENST00000473829 CLINT1Q14677 625 aa13.79□□□□□ -0.2
PTCD3-210ENST00000473829 FCN2Q15485 313 aa13.79□□□□□ -0.2
PTCD3-210ENST00000473829 C10orf113Q5VZT2 155 aa13.79□□□□□ -0.2
PTCD3-210ENST00000473829 FOXI2Q6ZQN5 318 aa13.79□□□□□ -0.2
PTCD3-210ENST00000473829 RNF182Q8N6D2 247 aa13.79□□□□□ -0.2
PTCD3-210ENST00000473829 OR11H7Q8NGC8 314 aa13.79□□□□□ -0.2
PTCD3-210ENST00000473829 OR11H2Q8NH07 326 aa13.79□□□□□ -0.2
PTCD3-210ENST00000473829 CHAC2Q8WUX2 184 aa13.79□□□□□ -0.2
PTCD3-210ENST00000473829 RARRES2Q99969 163 aa13.79□□□□□ -0.2
PTCD3-210ENST00000473829 MBD2Q9UBB5 411 aa13.79□□□□□ -0.2
PTCD3-210ENST00000473829 DYNC2H1Q8NCM8 4307 aaKnown RBP13.78□□□□□ -0.2
PTCD3-210ENST00000473829 A0A087X0K7 114 aa13.78□□□□□ -0.2
PTCD3-210ENST00000473829 IGKV3-20P01619 116 aa13.78□□□□□ -0.2
PTCD3-210ENST00000473829 B2MP61769 119 aa13.78□□□□□ -0.2
PTCD3-210ENST00000473829 SAMD13Q5VXD3 122 aa13.78□□□□□ -0.2
PTCD3-210ENST00000473829 CSNK1G2-AS1Q8NCQ2 148 aa13.78□□□□□ -0.2
PTCD3-210ENST00000473829 IL17DQ8TAD2 202 aa13.78□□□□□ -0.2
PTCD3-210ENST00000473829 NPCDR1Q9BY65 106 aa13.78□□□□□ -0.2
PTCD3-210ENST00000473829 SLC39A9Q9NUM3 307 aa13.78□□□□□ -0.2
PTCD3-210ENST00000473829 PXMP4Q9Y6I8 212 aa13.78□□□□□ -0.2
PTCD3-210ENST00000473829 ELOA3CA0A087WX78 387 aaPredicted RBP13.77□□□□□ -0.21
PTCD3-210ENST00000473829 SNRPCP09234 159 aaKnown RBP13.77□□□□□ -0.21
PTCD3-210ENST00000473829 PET100P0DJ07 73 aa13.77□□□□□ -0.21
PTCD3-210ENST00000473829 HLA-DMBP28068 263 aa13.77□□□□□ -0.21
PTCD3-210ENST00000473829 S100A7AQ86SG5 101 aa13.77□□□□□ -0.21
PTCD3-210ENST00000473829 RPRMQ9NS64 109 aa13.77□□□□□ -0.21
PTCD3-210ENST00000473829 TRAV5A0A0B4J249 113 aa13.76□□□□□ -0.21
PTCD3-210ENST00000473829 A0A0J9YX75 114 aa13.76□□□□□ -0.21
PTCD3-210ENST00000473829 MPDU1O75352 247 aa13.76□□□□□ -0.21
PTCD3-210ENST00000473829 FXYD7P58549 80 aa13.76□□□□□ -0.21
PTCD3-210ENST00000473829 TMEM41BQ5BJD5 291 aa13.76□□□□□ -0.21
PTCD3-210ENST00000473829 Q6ZRG5 221 aa13.76□□□□□ -0.21
PTCD3-210ENST00000473829 DNAJC4Q9NNZ3 241 aa13.76□□□□□ -0.21
PTCD3-210ENST00000473829 XCL2Q9UBD3 114 aa13.76□□□□□ -0.21
PTCD3-210ENST00000473829 HSPB11Q9Y547 144 aa13.76□□□□□ -0.21
PTCD3-210ENST00000473829 DEFB4AO15263 64 aa13.75□□□□□ -0.21
PTCD3-210ENST00000473829 RGS21Q2M5E4 152 aa13.75□□□□□ -0.21
PTCD3-210ENST00000473829 GCSAMLQ5JQS6 135 aa13.75□□□□□ -0.21
PTCD3-210ENST00000473829 FAM78BQ5VT40 261 aa13.75□□□□□ -0.21
PTCD3-210ENST00000473829 ZNF709Q8N972 641 aa13.75□□□□□ -0.21
PTCD3-210ENST00000473829 OR4B1Q8NGF8 309 aa13.75□□□□□ -0.21
PTCD3-210ENST00000473829 OR1L4Q8NGR5 311 aa13.75□□□□□ -0.21
PTCD3-210ENST00000473829 WDR61Q9GZS3 305 aaKnown RBP13.75□□□□□ -0.21
PTCD3-210ENST00000473829 MED28Q9H204 178 aa13.75□□□□□ -0.21
PTCD3-210ENST00000473829 X6R8D5 127 aa13.75□□□□□ -0.21
PTCD3-210ENST00000473829 TENM2Q9NT68 2774 aa13.75□□□□□ -0.21
PTCD3-210ENST00000473829 H3BTX0 84 aa13.74□□□□□ -0.21
PTCD3-210ENST00000473829 PRB4P10163 310 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms